FFCP PHASE1:Hg19::chr3:154798079..154798088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=0bp_to_NM_007289,uc003fae.1_5end | |association_with_transcript=0bp_to_NM_007289,uc003fae.1_5end | ||
|cluster_id=chr3:154798079..154798088,+ | |||
|coexpression_cluster_id=C1513 | |||
|description=CAGE_peak_16_at_MME_5end | |description=CAGE_peak_16_at_MME_5end | ||
|id=chr3:154798079..154798088,+ | |id=chr3:154798079..154798088,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.04e-14!180;CL:0000057!2.57e-11!75;CL:0000136!9.72e-10!15;CL:0002620!7.89e-08!23;CL:0000048!8.60e-07!430 | |ontology_enrichment_celltype=CL:0000055!6.04e-14!180;CL:0000057!2.57e-11!75;CL:0000136!9.72e-10!15;CL:0002620!7.89e-08!23;CL:0000048!8.60e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.98e-16;13!CL:0000775;6.60e-09;3!CL:0000094;6.33e-08;8!CL:0002521;7.84e-08;3!CL:0002504;1.99e-07;3!CL:1000279;1.99e-07;3!CL:1000280;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.72e-14,15;CL:0000775,6.50e-09,3;CL:0002521,5.97e-08,3;CL:0000094,6.44e-08,8;CL:0002504,1.44e-07,3;CL:1000279,1.44e-07,3;CL:1000280,1.44e-07,3;CL:0000048,2.13e-07,427;CL:0000723,4.32e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.00e-09!83;UBERON:0002329!2.00e-09!83;UBERON:0003077!2.00e-09!83;UBERON:0003059!2.00e-09!83;UBERON:0007282!2.00e-09!83;UBERON:0009618!2.00e-09!83;UBERON:0007285!2.00e-09!83;UBERON:0004290!6.33e-09!70;UBERON:0002199!7.56e-08!45;UBERON:0002416!7.56e-08!45;UBERON:0002100!1.13e-07!216;UBERON:0003102!1.27e-07!95;UBERON:0005256!3.04e-07!143;UBERON:0000486!3.99e-07!82 | |ontology_enrichment_uberon=UBERON:0000914!2.00e-09!83;UBERON:0002329!2.00e-09!83;UBERON:0003077!2.00e-09!83;UBERON:0003059!2.00e-09!83;UBERON:0007282!2.00e-09!83;UBERON:0009618!2.00e-09!83;UBERON:0007285!2.00e-09!83;UBERON:0004290!6.33e-09!70;UBERON:0002199!7.56e-08!45;UBERON:0002416!7.56e-08!45;UBERON:0002100!1.13e-07!216;UBERON:0003102!1.27e-07!95;UBERON:0005256!3.04e-07!143;UBERON:0000486!3.99e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,5.97e-08,3;UBERON:0002199,1.53e-07,46;UBERON:0002416,1.53e-07,46 | |||
|phase1_expression=3.27021082687002,3.42560838225573,1.26858963686374,1.0007329835313,0.446961094427288,0,5.06599756336621,1.89515962028049,2.08948502559871,0,0,0.436882744260345,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0.397227542439656,0,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0,2.80944069147288,0.570471821544449,1.34503812496621,1.05691048779388,0.647491777472526,1.54495887372473,0,0.491337269247072,0.206651562351531,4.75201142912821,1.7308685049499,0,0,0.673344455816265,0.625592599359821,0.554128230968366,0,0,1.50238058906597,0,0,2.13557388818567,2.7551147150743,0,0.515262646192195,0,0.558350568994769,0.506328996723799,0.779496041289589,0.252433774244115,1.93304787148829,0,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,1.14296209725904,0,0,0,0.205654985406647,5.1058319833466,0.285826432630578,0.112131084345361,0,0,0.904902010304444,0,0,1.59562869950922,0,0,0,0,1.42977993658148,7.05408087008876,2.46972101034231,0.65147236858747,1.77695974371273,7.12756685640086,0,0,0,0,0,0,0,0,0,1.15825045334063,0,3.40215830155802,0,0,0,0,0,0,0,0,0,13.4821264310493,8.97484377612075,16.5766205374414,0.12269149171914,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,8.51459421787212,0,0,0,0,0,0,0,0.907170879989041,2.23297027036899,0.767309866440312,2.80660094433074,0.256278298511402,3.07024349440022,0,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.34444334449382,0.364182336013434,0.262248829918848,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0.54941678891006,0.495056999523528,0,0,0,0.96670718292122,0.924291702687866,1.07452572308291,1.24052915236078,10.6346042419591,4.35050081742686,0.767039646744908,0.445160178233687,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.632758849437452,0.953150969619124,0,2.1396949401696,0,0,3.59744915166629,1.92175920815238,1.17812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,17.4961849688943,28.8852180578576,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,2.59389324477087,0.540031437238115,0,1.70918513803957,0,0,0,4.03953796334046,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0.242721043499027,0,0,0.95497793895076,0,0.614321404198464,0,0,1.55832187032068,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.957003479195758,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,2.91909962861019,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0.372757606696298,0.235694034616795,1.22313785466253,1.98745407993433,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,1.15400093896996,0,0,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.992332043623902,0,0,0,0.544017803369474,1.7548292581589,3.06345576763462,5.90170735277648,0.628216385000937,0,0,0,0,0,0,0,0,0.151649117541648,2.28372266835974,0,0,0,0,1.16856654923612,0.554805861502613,1.89403005275089,1.25783950876288,0.889811221596536,0.228840068396924,0.604923695052956,0,0.147855149989634,0.159296767163702,8.09645601894488,0.155262956876259,0.414706207840855,1.06336685823198,1.5652351854352,0.150257608997218,0,0,1.09109195521536,0.107410557042488,1.85613503951397,1.19428766609585,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,1.23682402162117,0.578742114812744,0,0,0,2.73473960559644,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,1.37190407549935,0,0,0,0,0.392465464252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| |phase1_expression=3.27021082687002,3.42560838225573,1.26858963686374,1.0007329835313,0.446961094427288,0,5.06599756336621,1.89515962028049,2.08948502559871,0,0,0.436882744260345,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0.397227542439656,0,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0,2.80944069147288,0.570471821544449,1.34503812496621,1.05691048779388,0.647491777472526,1.54495887372473,0,0.491337269247072,0.206651562351531,4.75201142912821,1.7308685049499,0,0,0.673344455816265,0.625592599359821,0.554128230968366,0,0,1.50238058906597,0,0,2.13557388818567,2.7551147150743,0,0.515262646192195,0,0.558350568994769,0.506328996723799,0.779496041289589,0.252433774244115,1.93304787148829,0,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,1.14296209725904,0,0,0,0.205654985406647,5.1058319833466,0.285826432630578,0.112131084345361,0,0,0.904902010304444,0,0,1.59562869950922,0,0,0,0,1.42977993658148,7.05408087008876,2.46972101034231,0.65147236858747,1.77695974371273,7.12756685640086,0,0,0,0,0,0,0,0,0,1.15825045334063,0,3.40215830155802,0,0,0,0,0,0,0,0,0,13.4821264310493,8.97484377612075,16.5766205374414,0.12269149171914,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,8.51459421787212,0,0,0,0,0,0,0,0.907170879989041,2.23297027036899,0.767309866440312,2.80660094433074,0.256278298511402,3.07024349440022,0,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.34444334449382,0.364182336013434,0.262248829918848,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0.54941678891006,0.495056999523528,0,0,0,0.96670718292122,0.924291702687866,1.07452572308291,1.24052915236078,10.6346042419591,4.35050081742686,0.767039646744908,0.445160178233687,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.632758849437452,0.953150969619124,0,2.1396949401696,0,0,3.59744915166629,1.92175920815238,1.17812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,17.4961849688943,28.8852180578576,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,2.59389324477087,0.540031437238115,0,1.70918513803957,0,0,0,4.03953796334046,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0.242721043499027,0,0,0.95497793895076,0,0.614321404198464,0,0,1.55832187032068,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.957003479195758,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,2.91909962861019,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0.372757606696298,0.235694034616795,1.22313785466253,1.98745407993433,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,1.15400093896996,0,0,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.992332043623902,0,0,0,0.544017803369474,1.7548292581589,3.06345576763462,5.90170735277648,0.628216385000937,0,0,0,0,0,0,0,0,0.151649117541648,2.28372266835974,0,0,0,0,1.16856654923612,0.554805861502613,1.89403005275089,1.25783950876288,0.889811221596536,0.228840068396924,0.604923695052956,0,0.147855149989634,0.159296767163702,8.09645601894488,0.155262956876259,0.414706207840855,1.06336685823198,1.5652351854352,0.150257608997218,0,0,1.09109195521536,0.107410557042488,1.85613503951397,1.19428766609585,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,1.23682402162117,0.578742114812744,0,0,0,2.73473960559644,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,1.37190407549935,0,0,0,0,0.392465464252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| ||
|short_description=p16@MME | |short_description=p16@MME | ||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p16@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MME_5end |
Coexpression cluster: | C1513_Smooth_Neutrophils_Eosinophils_Pancreatic_Mesenchymal_Skeletal_mesenchymal |
Association with transcript: | 0bp_to_NM_007289, uc003fae.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.72e-14 | 15 |
neutrophil | 6.50e-09 | 3 |
subcutaneous fat cell | 5.97e-08 | 3 |
granulocyte | 6.44e-08 | 8 |
enteric smooth muscle cell | 1.44e-07 | 3 |
smooth muscle cell of large intestine | 1.44e-07 | 3 |
smooth muscle cell of colon | 1.44e-07 | 3 |
multi fate stem cell | 2.13e-07 | 427 |
somatic stem cell | 4.32e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 5.97e-08 | 3 |
integument | 1.53e-07 | 46 |
integumental system | 1.53e-07 | 46 |