FFCP PHASE1:Hg19::chr3:15374033..15374107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9467 | |EntrezGene=9467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10827 | |HGNC=10827 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQW6,C9J140,O60239 | |UniProt=B3KQW6,C9J140,O60239 | ||
|association_with_transcript=0bp_to_ENST00000253688,ENST00000412806,NM_004844,uc003bzp.1,uc010hem.1_5end | |association_with_transcript=0bp_to_ENST00000253688,ENST00000412806,NM_004844,uc003bzp.1,uc010hem.1_5end | ||
|cluster_id=chr3:15374033..15374107,- | |||
|description=CAGE_peak_1_at_SH3BP5_5end | |description=CAGE_peak_1_at_SH3BP5_5end | ||
|id=chr3:15374033..15374107,- | |id=chr3:15374033..15374107,- | ||
|ontology_enrichment_celltype=CL:0002057!9.34e-14!42;CL:0000860!1.35e-13!45;CL:0002087!2.25e-11!119;CL:0002009!7.43e-11!65;CL:0000738!8.42e-11!140;CL:0002139!2.25e-10!24;CL:0002194!4.20e-10!63;CL:0000576!4.20e-10!63;CL:0000040!4.20e-10!63;CL:0000559!4.20e-10!63;CL:0000766!2.61e-09!76;CL:0000115!1.39e-08!35;CL:0002078!2.63e-08!44;CL:0002031!3.75e-08!124;CL:0000071!5.04e-08!18;CL:0002546!5.04e-08!18;CL:0000557!1.13e-07!71 | |ontology_enrichment_celltype=CL:0002057!9.34e-14!42;CL:0000860!1.35e-13!45;CL:0002087!2.25e-11!119;CL:0002009!7.43e-11!65;CL:0000738!8.42e-11!140;CL:0002139!2.25e-10!24;CL:0002194!4.20e-10!63;CL:0000576!4.20e-10!63;CL:0000040!4.20e-10!63;CL:0000559!4.20e-10!63;CL:0000766!2.61e-09!76;CL:0000115!1.39e-08!35;CL:0002078!2.63e-08!44;CL:0002031!3.75e-08!124;CL:0000071!5.04e-08!18;CL:0002546!5.04e-08!18;CL:0000557!1.13e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.14e-15;33!CL:0002057;5.14e-15;33!CL:0000473;2.74e-13;39!CL:0000234;2.74e-13;39!CL:0002139;2.27e-10;24!CL:0000071;5.09e-08;18!CL:0000115;6.33e-08;36!CL:0000576;4.26e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.41e-14,48;CL:0000234,1.41e-14,48;CL:0000860,9.34e-14,42;CL:0002057,9.34e-14,42;CL:0002087,4.86e-11,115;CL:0002009,1.37e-10,61;CL:0000738,1.85e-10,136;CL:0002139,2.25e-10,24;CL:0002194,7.82e-10,59;CL:0000576,7.82e-10,59;CL:0000040,7.82e-10,59;CL:0000559,7.82e-10,59;CL:0000115,4.32e-09,36;CL:0000766,5.24e-09,72;CL:0002078,8.92e-09,45;CL:0000071,5.04e-08,18;CL:0002546,5.04e-08,18;CL:0002031,7.86e-08,120;CL:0000557,2.27e-07,67;CL:0000213,6.42e-07,58;CL:0000215,6.42e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-10;42!CL:0002546;5.09e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.36e-22!115;UBERON:0005743!8.83e-09!86;UBERON:0001049!8.98e-09!57;UBERON:0005068!8.98e-09!57;UBERON:0006241!8.98e-09!57;UBERON:0007135!8.98e-09!57;UBERON:0001017!1.55e-08!82;UBERON:0002193!2.00e-08!112;UBERON:0001986!5.04e-08!18;UBERON:0004638!5.04e-08!18;UBERON:0004852!5.04e-08!18;UBERON:0002616!1.86e-07!59;UBERON:0000955!2.91e-07!69;UBERON:0006238!2.91e-07!69;UBERON:0000073!2.92e-07!94;UBERON:0001016!2.92e-07!94;UBERON:0003080!3.19e-07!42;UBERON:0002390!5.02e-07!102;UBERON:0003061!5.02e-07!102;UBERON:0003075!7.26e-07!86;UBERON:0007284!7.26e-07!86;UBERON:0002780!8.60e-07!41;UBERON:0001890!8.60e-07!41;UBERON:0006240!8.60e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!2.36e-22!115;UBERON:0005743!8.83e-09!86;UBERON:0001049!8.98e-09!57;UBERON:0005068!8.98e-09!57;UBERON:0006241!8.98e-09!57;UBERON:0007135!8.98e-09!57;UBERON:0001017!1.55e-08!82;UBERON:0002193!2.00e-08!112;UBERON:0001986!5.04e-08!18;UBERON:0004638!5.04e-08!18;UBERON:0004852!5.04e-08!18;UBERON:0002616!1.86e-07!59;UBERON:0000955!2.91e-07!69;UBERON:0006238!2.91e-07!69;UBERON:0000073!2.92e-07!94;UBERON:0001016!2.92e-07!94;UBERON:0003080!3.19e-07!42;UBERON:0002390!5.02e-07!102;UBERON:0003061!5.02e-07!102;UBERON:0003075!7.26e-07!86;UBERON:0007284!7.26e-07!86;UBERON:0002780!8.60e-07!41;UBERON:0001890!8.60e-07!41;UBERON:0006240!8.60e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.09e-08;18!UBERON:0001986;5.09e-08;18!UBERON:0004852;5.09e-08;18!UBERON:0007023;5.71e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.60e-22,114;UBERON:0001049,2.40e-08,56;UBERON:0005068,2.40e-08,56;UBERON:0006241,2.40e-08,56;UBERON:0007135,2.40e-08,56;UBERON:0001017,3.67e-08,81;UBERON:0002193,4.21e-08,108;UBERON:0004638,5.04e-08,18;UBERON:0001986,5.04e-08,18;UBERON:0004852,5.04e-08,18;UBERON:0000073,8.59e-08,53;UBERON:0002616,8.59e-08,53;UBERON:0002405,1.85e-07,93;UBERON:0000955,6.78e-07,68;UBERON:0006238,6.78e-07,68;UBERON:0002780,8.60e-07,41;UBERON:0001890,8.60e-07,41;UBERON:0003080,8.60e-07,41;UBERON:0006240,8.60e-07,41 | |||
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| ||
|short_description=p1@SH3BP5 | |short_description=p1@SH3BP5 | ||
}} | }} |
Latest revision as of 03:54, 16 September 2015
Short description: | p1@SH3BP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH3BP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000253688, ENST00000412806, NM_004844, uc003bzp.1, uc010hem.1_5end |
EntrezGene: | SH3BP5 |
HGNC: | 10827 |
UniProt: | B3KQW6C9J140O60239 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.41e-14 | 48 |
phagocyte | 1.41e-14 | 48 |
classical monocyte | 9.34e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.34e-14 | 42 |
nongranular leukocyte | 4.86e-11 | 115 |
macrophage dendritic cell progenitor | 1.37e-10 | 61 |
leukocyte | 1.85e-10 | 136 |
endothelial cell of vascular tree | 2.25e-10 | 24 |
monopoietic cell | 7.82e-10 | 59 |
monocyte | 7.82e-10 | 59 |
monoblast | 7.82e-10 | 59 |
promonocyte | 7.82e-10 | 59 |
endothelial cell | 4.32e-09 | 36 |
myeloid leukocyte | 5.24e-09 | 72 |
meso-epithelial cell | 8.92e-09 | 45 |
blood vessel endothelial cell | 5.04e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.04e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 7.86e-08 | 120 |
granulocyte monocyte progenitor cell | 2.27e-07 | 67 |
lining cell | 6.42e-07 | 58 |
barrier cell | 6.42e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.60e-22 | 114 |
neural tube | 2.40e-08 | 56 |
neural rod | 2.40e-08 | 56 |
future spinal cord | 2.40e-08 | 56 |
neural keel | 2.40e-08 | 56 |
central nervous system | 3.67e-08 | 81 |
hemolymphoid system | 4.21e-08 | 108 |
blood vessel endothelium | 5.04e-08 | 18 |
endothelium | 5.04e-08 | 18 |
cardiovascular system endothelium | 5.04e-08 | 18 |
regional part of nervous system | 8.59e-08 | 53 |
regional part of brain | 8.59e-08 | 53 |
immune system | 1.85e-07 | 93 |
brain | 6.78e-07 | 68 |
future brain | 6.78e-07 | 68 |
regional part of forebrain | 8.60e-07 | 41 |
forebrain | 8.60e-07 | 41 |
anterior neural tube | 8.60e-07 | 41 |
future forebrain | 8.60e-07 | 41 |