FFCP PHASE1:Hg19::chr3:149051376..149051400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116441 | |EntrezGene=116441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25181 | |HGNC=25181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_uc003exa.2_5end | |association_with_transcript=18bp_to_uc003exa.2_5end | ||
|cluster_id=chr3:149051376..149051400,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_1_at_TM4SF18_5end | |description=CAGE_peak_1_at_TM4SF18_5end | ||
|id=chr3:149051376..149051400,- | |id=chr3:149051376..149051400,- | ||
|ontology_enrichment_celltype=CL:0002139!3.73e-24!24;CL:0000115!1.27e-19!35;CL:0000071!4.00e-18!18;CL:0002546!4.00e-18!18;CL:0002078!5.24e-15!44;CL:1000413!1.36e-09!9;CL:0000213!1.20e-07!57;CL:0000215!1.20e-07!57;CL:0005020!1.37e-07!6;CL:0002138!1.37e-07!6;CL:0005022!1.37e-07!6;CL:0002543!3.44e-07!6;CL:0002544!5.76e-07!6 | |ontology_enrichment_celltype=CL:0002139!3.73e-24!24;CL:0000115!1.27e-19!35;CL:0000071!4.00e-18!18;CL:0002546!4.00e-18!18;CL:0002078!5.24e-15!44;CL:1000413!1.36e-09!9;CL:0000213!1.20e-07!57;CL:0000215!1.20e-07!57;CL:0005020!1.37e-07!6;CL:0002138!1.37e-07!6;CL:0005022!1.37e-07!6;CL:0002543!3.44e-07!6;CL:0002544!5.76e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.12e-30;24!CL:0000115;1.60e-22;36!CL:0000071;1.79e-22;18!CL:0002078;9.58e-14;45!CL:1000413;1.08e-11;9!CL:0002138;3.48e-09;6!CL:0002543;1.13e-08;6!CL:0000213;2.22e-08;58!CL:0000215;2.22e-08;58!CL:0002544;2.22e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.93e-30,24;CL:0000115,1.09e-26,36;CL:0000071,1.70e-22,18;CL:0002546,1.70e-22,18;CL:0002078,2.16e-20,45;CL:0000213,2.47e-12,58;CL:0000215,2.47e-12,58;CL:1000413,1.04e-11,9;CL:0005020,3.50e-09,6;CL:0002138,3.50e-09,6;CL:0005022,3.50e-09,6;CL:0002543,1.11e-08,6;CL:0002544,2.14e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-22;18!CL:0005022;3.48e-09;6!UBERON:0006601;6.42e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.88e-44!115;UBERON:0001049!3.22e-26!57;UBERON:0005068!3.22e-26!57;UBERON:0006241!3.22e-26!57;UBERON:0007135!3.22e-26!57;UBERON:0004111!1.88e-25!241;UBERON:0000025!8.80e-25!194;UBERON:0005743!1.04e-24!86;UBERON:0002616!3.17e-24!59;UBERON:0000477!4.71e-24!286;UBERON:0003075!1.09e-23!86;UBERON:0007284!1.09e-23!86;UBERON:0000073!8.89e-23!94;UBERON:0001016!8.89e-23!94;UBERON:0001017!3.01e-22!82;UBERON:0002346!1.29e-21!90;UBERON:0000955!2.14e-21!69;UBERON:0006238!2.14e-21!69;UBERON:0003080!1.40e-20!42;UBERON:0002780!9.12e-20!41;UBERON:0001890!9.12e-20!41;UBERON:0006240!9.12e-20!41;UBERON:0001986!4.00e-18!18;UBERON:0004638!4.00e-18!18;UBERON:0004852!4.00e-18!18;UBERON:0000119!2.02e-17!312;UBERON:0003056!4.16e-17!61;UBERON:0000483!8.42e-17!309;UBERON:0002020!1.77e-16!34;UBERON:0003528!1.77e-16!34;UBERON:0000487!3.13e-16!22;UBERON:0001893!6.51e-16!34;UBERON:0000153!1.16e-15!129;UBERON:0007811!1.16e-15!129;UBERON:0002791!1.63e-15!33;UBERON:0001869!5.31e-15!32;UBERON:0000033!8.59e-15!123;UBERON:0006914!3.04e-13!25;UBERON:0004121!7.75e-13!169;UBERON:0000468!1.83e-12!659;UBERON:0000467!2.00e-12!625;UBERON:0000480!2.66e-12!626;UBERON:0000924!5.66e-12!173;UBERON:0006601!5.66e-12!173;UBERON:0000956!1.42e-11!25;UBERON:0000203!1.42e-11!25;UBERON:0002619!8.17e-11!22;UBERON:0000481!4.54e-10!347;UBERON:0001950!1.32e-09!20;UBERON:0003915!1.36e-09!9;UBERON:0004700!1.36e-09!9;UBERON:0001917!1.36e-09!9;UBERON:0000922!2.71e-09!612;UBERON:0000064!4.16e-09!219;UBERON:0000475!6.19e-09!365;UBERON:0002050!5.33e-08!605;UBERON:0005423!5.33e-08!605;UBERON:0002049!1.11e-07!79;UBERON:0007798!1.11e-07!79;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0000062!2.25e-07!511;UBERON:0000055!3.66e-07!69;UBERON:0003103!6.47e-07!69;UBERON:0003076!7.33e-07!15;UBERON:0003057!7.33e-07!15;UBERON:0002298!8.95e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!7.88e-44!115;UBERON:0001049!3.22e-26!57;UBERON:0005068!3.22e-26!57;UBERON:0006241!3.22e-26!57;UBERON:0007135!3.22e-26!57;UBERON:0004111!1.88e-25!241;UBERON:0000025!8.80e-25!194;UBERON:0005743!1.04e-24!86;UBERON:0002616!3.17e-24!59;UBERON:0000477!4.71e-24!286;UBERON:0003075!1.09e-23!86;UBERON:0007284!1.09e-23!86;UBERON:0000073!8.89e-23!94;UBERON:0001016!8.89e-23!94;UBERON:0001017!3.01e-22!82;UBERON:0002346!1.29e-21!90;UBERON:0000955!2.14e-21!69;UBERON:0006238!2.14e-21!69;UBERON:0003080!1.40e-20!42;UBERON:0002780!9.12e-20!41;UBERON:0001890!9.12e-20!41;UBERON:0006240!9.12e-20!41;UBERON:0001986!4.00e-18!18;UBERON:0004638!4.00e-18!18;UBERON:0004852!4.00e-18!18;UBERON:0000119!2.02e-17!312;UBERON:0003056!4.16e-17!61;UBERON:0000483!8.42e-17!309;UBERON:0002020!1.77e-16!34;UBERON:0003528!1.77e-16!34;UBERON:0000487!3.13e-16!22;UBERON:0001893!6.51e-16!34;UBERON:0000153!1.16e-15!129;UBERON:0007811!1.16e-15!129;UBERON:0002791!1.63e-15!33;UBERON:0001869!5.31e-15!32;UBERON:0000033!8.59e-15!123;UBERON:0006914!3.04e-13!25;UBERON:0004121!7.75e-13!169;UBERON:0000468!1.83e-12!659;UBERON:0000467!2.00e-12!625;UBERON:0000480!2.66e-12!626;UBERON:0000924!5.66e-12!173;UBERON:0006601!5.66e-12!173;UBERON:0000956!1.42e-11!25;UBERON:0000203!1.42e-11!25;UBERON:0002619!8.17e-11!22;UBERON:0000481!4.54e-10!347;UBERON:0001950!1.32e-09!20;UBERON:0003915!1.36e-09!9;UBERON:0004700!1.36e-09!9;UBERON:0001917!1.36e-09!9;UBERON:0000922!2.71e-09!612;UBERON:0000064!4.16e-09!219;UBERON:0000475!6.19e-09!365;UBERON:0002050!5.33e-08!605;UBERON:0005423!5.33e-08!605;UBERON:0002049!1.11e-07!79;UBERON:0007798!1.11e-07!79;UBERON:0000923!1.13e-07!604;UBERON:0005291!1.13e-07!604;UBERON:0006598!1.13e-07!604;UBERON:0002532!1.13e-07!604;UBERON:0000062!2.25e-07!511;UBERON:0000055!3.66e-07!69;UBERON:0003103!6.47e-07!69;UBERON:0003076!7.33e-07!15;UBERON:0003057!7.33e-07!15;UBERON:0002298!8.95e-07!8 | ||
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| ||
|short_description=p1@TM4SF18 | |short_description=p1@TM4SF18 | ||
}} | }} |
Latest revision as of 21:14, 15 September 2015
Short description: | p1@TM4SF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TM4SF18_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 18bp_to_uc003exa.2_5end |
EntrezGene: | TM4SF18 |
HGNC: | 25181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.93e-30 | 24 |
endothelial cell | 1.09e-26 | 36 |
blood vessel endothelial cell | 1.70e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.70e-22 | 18 |
meso-epithelial cell | 2.16e-20 | 45 |
lining cell | 2.47e-12 | 58 |
barrier cell | 2.47e-12 | 58 |
endothelial cell of artery | 1.04e-11 | 9 |
lymphangioblast | 3.50e-09 | 6 |
endothelial cell of lymphatic vessel | 3.50e-09 | 6 |
vascular lymphangioblast | 3.50e-09 | 6 |
vein endothelial cell | 1.11e-08 | 6 |
aortic endothelial cell | 2.14e-08 | 6 |