FFCP PHASE1:Hg19::chrY:59027988..59028000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrY:59027988..59028000,+ | |||
|description=CAGE_peak_at_chrY:59027988..59028000,+ | |description=CAGE_peak_at_chrY:59027988..59028000,+ | ||
|id=chrY:59027988..59028000,+ | |id=chrY:59027988..59028000,+ | ||
|ontology_enrichment_celltype=CL:0002541!9.56e-27!3;CL:0000039!2.35e-19!7;CL:0000586!2.35e-19!7;CL:0001014!1.34e-17!2;CL:0001016!1.34e-17!2;CL:0002537!2.71e-15!5;CL:0000082!4.48e-11!19;CL:0000083!3.04e-09!4;CL:0000453!1.41e-07!5 | |ontology_enrichment_celltype=CL:0002541!9.56e-27!3;CL:0000039!2.35e-19!7;CL:0000586!2.35e-19!7;CL:0001014!1.34e-17!2;CL:0001016!1.34e-17!2;CL:0002537!2.71e-15!5;CL:0000082!4.48e-11!19;CL:0000083!3.04e-09!4;CL:0000453!1.41e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.84e-51;3!CL:0000082;2.67e-14;19!CL:0000039;2.70e-10;7!CL:0000586;2.70e-10;7!CL:0001014;1.27e-09;2!CL:0001016;1.27e-09;2!CL:0000349;1.31e-08;19!CL:0000322;6.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.11e-51,3;CL:0000082,2.81e-14,19;CL:0000039,2.35e-10,7;CL:0000586,2.35e-10,7;CL:0001014,1.22e-09,2;CL:0001016,1.22e-09,2;CL:0000349,1.35e-08,19;CL:0000322,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.77e-09;29!UBERON:0001041;3.59e-09;30 | |||
|ontology_enrichment_disease=DOID:1324!4.54e-14!15;DOID:0050615!3.51e-13!16;DOID:1799!1.76e-09!1;DOID:10165!1.76e-09!1;DOID:1798!1.76e-09!1;DOID:305!2.51e-09!106;DOID:1793!3.04e-09!4;DOID:0050687!5.39e-09!143;DOID:3908!9.13e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:1324;5.19e-18;15!DOID:0050615;6.54e-17;16!DOID:3908;3.37e-14;5!DOID:1325;1.53e-10;7!DOID:3904;1.53e-10;7!DOID:3910;1.03e-09;2!DOID:4074;1.71e-09;2!DOID:4905;1.71e-09;2!DOID:3498;1.71e-09;2!DOID:3905;2.65e-08;9!DOID:4556;9.64e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,5.55e-18,15;DOID:0050615,6.96e-17,16;DOID:3908,3.60e-14,5;DOID:1325,1.46e-10,7;DOID:3904,1.46e-10,7;DOID:3910,9.46e-10,2;DOID:4074,1.71e-09,2;DOID:4905,1.71e-09,2;DOID:3498,1.71e-09,2;DOID:3905,2.75e-08,9;DOID:305,3.32e-07,106;DOID:0050687,8.91e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.56e-27!3;UBERON:0000920!9.56e-27!3;UBERON:0005631!3.15e-21!14;UBERON:0000158!3.15e-21!14;UBERON:0000478!3.33e-12!24;UBERON:0003124!8.51e-12!7;UBERON:0000305!4.37e-11!7;UBERON:0004802!4.48e-11!19;UBERON:0000115!4.48e-11!19;UBERON:0004871!9.12e-10!8;UBERON:0002048!1.53e-09!22;UBERON:0000117!1.53e-09!22;UBERON:0000171!1.53e-09!22;UBERON:0000170!1.53e-09!22;UBERON:0005597!1.53e-09!22;UBERON:0000118!1.53e-09!22;UBERON:0004807!1.88e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.84e-51;3!UBERON:0000920;6.84e-51;3!UBERON:0005631;8.23e-16;10!UBERON:0000158;8.23e-16;10!UBERON:0004802;2.67e-14;19!UBERON:0000115;2.67e-14;19!UBERON:0002048;2.13e-12;22!UBERON:0004807;2.13e-12;22!UBERON:0000117;2.13e-12;22!UBERON:0000171;2.13e-12;22!UBERON:0000170;2.13e-12;22!UBERON:0004903;1.03e-09;2!UBERON:0002173;1.03e-09;2!UBERON:0002186;1.03e-09;2!UBERON:0005178;2.32e-07;34!UBERON:0002224;2.32e-07;34!UBERON:0005911;3.19e-07;36!UBERON:0000478;6.35e-07;24!UBERON:0004821;6.88e-07;3!UBERON:0007499;6.88e-07;3!UBERON:0003215;6.88e-07;3!UBERON:0010368;6.88e-07;3!UBERON:0009911;6.88e-07;3!UBERON:0002299;6.88e-07;3!UBERON:0006524;6.88e-07;3!UBERON:0008874;6.88e-07;3!UBERON:0002169;6.88e-07;3!UBERON:0004894;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.11e-51,3;UBERON:0003124,2.99e-22,7;UBERON:0004802,2.81e-14,19;UBERON:0000115,2.81e-14,19;UBERON:0002048,2.23e-12,22;UBERON:0000117,2.23e-12,22;UBERON:0000171,2.23e-12,22;UBERON:0000170,2.23e-12,22;UBERON:0005597,2.23e-12,22;UBERON:0000118,2.23e-12,22;UBERON:0005631,1.84e-11,14;UBERON:0000158,1.84e-11,14;UBERON:0004807,8.61e-10,28;UBERON:0004903,9.46e-10,2;UBERON:0002173,9.46e-10,2;UBERON:0002186,9.46e-10,2;UBERON:0005178,4.13e-08,34;UBERON:0002224,4.13e-08,34;UBERON:0005181,6.93e-08,35;UBERON:0005153,1.79e-07,37;UBERON:0008947,2.78e-07,38;UBERON:0003258,2.78e-07,38;UBERON:0000478,6.48e-07,24;UBERON:0004821,6.50e-07,3;UBERON:0003215,6.50e-07,3;UBERON:0010368,6.50e-07,3;UBERON:0009911,6.50e-07,3;UBERON:0002299,6.50e-07,3;UBERON:0006524,6.50e-07,3;UBERON:0008874,6.50e-07,3;UBERON:0002169,6.50e-07,3;UBERON:0004894,6.50e-07,3 | |||
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|short_description=p@chrY:59027988..59028000,+ | |short_description=p@chrY:59027988..59028000,+ | ||
}} | }} |
Latest revision as of 10:05, 1 August 2015
Short description: | p@chrY:59027988..59028000, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrY:59027988..59028000, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.11e-51 | 3 |
epithelial cell of lung | 2.81e-14 | 19 |
germ line cell | 2.35e-10 | 7 |
germ cell | 2.35e-10 | 7 |
CD1a-positive Langerhans cell | 1.22e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.22e-09 | 2 |
extraembryonic cell | 1.35e-08 | 19 |
pneumocyte | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.11e-51 | 3 |
chorion | 2.99e-22 | 7 |
respiratory tract epithelium | 2.81e-14 | 19 |
lung epithelium | 2.81e-14 | 19 |
lung | 2.23e-12 | 22 |
respiratory tube | 2.23e-12 | 22 |
respiration organ | 2.23e-12 | 22 |
pair of lungs | 2.23e-12 | 22 |
lung primordium | 2.23e-12 | 22 |
lung bud | 2.23e-12 | 22 |
extraembryonic membrane | 1.84e-11 | 14 |
membranous layer | 1.84e-11 | 14 |
respiratory system epithelium | 8.61e-10 | 28 |
bronchoalveolar duct junction | 9.46e-10 | 2 |
alveolar duct | 9.46e-10 | 2 |
bronchiole | 9.46e-10 | 2 |
thoracic cavity element | 4.13e-08 | 34 |
thoracic cavity | 4.13e-08 | 34 |
thoracic segment organ | 6.93e-08 | 35 |
epithelial bud | 1.79e-07 | 37 |
respiratory primordium | 2.78e-07 | 38 |
endoderm of foregut | 2.78e-07 | 38 |
extraembryonic structure | 6.48e-07 | 24 |
pulmonary alveolus epithelium | 6.50e-07 | 3 |
alveolus | 6.50e-07 | 3 |
pulmonary lobule | 6.50e-07 | 3 |
lobule | 6.50e-07 | 3 |
alveolus of lung | 6.50e-07 | 3 |
alveolar system | 6.50e-07 | 3 |
pulmonary acinus | 6.50e-07 | 3 |
alveolar sac | 6.50e-07 | 3 |
alveolar wall | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 5.55e-18 | 15 |
respiratory system cancer | 6.96e-17 | 16 |
non-small cell lung carcinoma | 3.60e-14 | 5 |
bronchus cancer | 1.46e-10 | 7 |
bronchogenic carcinoma | 1.46e-10 | 7 |
lung adenocarcinoma | 9.46e-10 | 2 |
pancreas adenocarcinoma | 1.71e-09 | 2 |
pancreatic carcinoma | 1.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.71e-09 | 2 |
lung carcinoma | 2.75e-08 | 9 |
carcinoma | 3.32e-07 | 106 |
cell type cancer | 8.91e-07 | 143 |