FFCP PHASE1:Hg19::chr3:141103404..141103414,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253461 | |EntrezGene=253461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26636 | |HGNC=26636 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHD1 | |UniProt=D6RHD1 | ||
|association_with_transcript=-237bp_to_ENST00000507722_5end | |association_with_transcript=-237bp_to_ENST00000507722_5end | ||
|cluster_id=chr3:141103404..141103414,+ | |||
|coexpression_cluster_id=C710 | |||
|description=CAGE_peak_74_at_ZBTB38_5end | |description=CAGE_peak_74_at_ZBTB38_5end | ||
|id=chr3:141103404..141103414,+ | |id=chr3:141103404..141103414,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.56e-09!24;CL:0000826!1.56e-09!24;CL:0002551!4.97e-08!6 | |ontology_enrichment_celltype=CL:0000945!1.56e-09!24;CL:0000826!1.56e-09!24;CL:0002551!4.97e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-44;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.36e-24!57;UBERON:0005068!3.36e-24!57;UBERON:0006241!3.36e-24!57;UBERON:0007135!3.36e-24!57;UBERON:0002616!2.95e-23!59;UBERON:0001869!4.17e-23!32;UBERON:0001950!3.44e-22!20;UBERON:0001893!1.25e-21!34;UBERON:0000955!2.48e-21!69;UBERON:0006238!2.48e-21!69;UBERON:0002619!4.24e-20!22;UBERON:0002791!6.33e-19!33;UBERON:0002020!2.58e-18!34;UBERON:0003528!2.58e-18!34;UBERON:0002780!1.44e-17!41;UBERON:0001890!1.44e-17!41;UBERON:0006240!1.44e-17!41;UBERON:0000956!1.45e-17!25;UBERON:0000203!1.45e-17!25;UBERON:0001017!2.28e-17!82;UBERON:0003080!4.27e-17!42;UBERON:0005743!2.19e-16!86;UBERON:0003075!8.70e-15!86;UBERON:0007284!8.70e-15!86;UBERON:0000073!1.79e-14!94;UBERON:0001016!1.79e-14!94;UBERON:0002346!5.82e-14!90;UBERON:0007023!1.49e-11!115;UBERON:0003056!4.95e-11!61;UBERON:0004733!1.63e-10!12;UBERON:0002028!1.63e-10!12;UBERON:0007277!1.63e-10!12;UBERON:0000033!2.68e-10!123;UBERON:0002021!6.35e-10!5;UBERON:0004732!1.10e-09!13;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0002680!1.80e-09!9;UBERON:0001895!1.80e-09!9;UBERON:0010092!1.80e-09!9;UBERON:0002037!1.11e-08!6;UBERON:0006215!1.11e-08!6;UBERON:0003076!2.35e-08!15;UBERON:0003057!2.35e-08!15;UBERON:0000200!4.19e-08!6 | |ontology_enrichment_uberon=UBERON:0001049!3.36e-24!57;UBERON:0005068!3.36e-24!57;UBERON:0006241!3.36e-24!57;UBERON:0007135!3.36e-24!57;UBERON:0002616!2.95e-23!59;UBERON:0001869!4.17e-23!32;UBERON:0001950!3.44e-22!20;UBERON:0001893!1.25e-21!34;UBERON:0000955!2.48e-21!69;UBERON:0006238!2.48e-21!69;UBERON:0002619!4.24e-20!22;UBERON:0002791!6.33e-19!33;UBERON:0002020!2.58e-18!34;UBERON:0003528!2.58e-18!34;UBERON:0002780!1.44e-17!41;UBERON:0001890!1.44e-17!41;UBERON:0006240!1.44e-17!41;UBERON:0000956!1.45e-17!25;UBERON:0000203!1.45e-17!25;UBERON:0001017!2.28e-17!82;UBERON:0003080!4.27e-17!42;UBERON:0005743!2.19e-16!86;UBERON:0003075!8.70e-15!86;UBERON:0007284!8.70e-15!86;UBERON:0000073!1.79e-14!94;UBERON:0001016!1.79e-14!94;UBERON:0002346!5.82e-14!90;UBERON:0007023!1.49e-11!115;UBERON:0003056!4.95e-11!61;UBERON:0004733!1.63e-10!12;UBERON:0002028!1.63e-10!12;UBERON:0007277!1.63e-10!12;UBERON:0000033!2.68e-10!123;UBERON:0002021!6.35e-10!5;UBERON:0004732!1.10e-09!13;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0002680!1.80e-09!9;UBERON:0001895!1.80e-09!9;UBERON:0010092!1.80e-09!9;UBERON:0002037!1.11e-08!6;UBERON:0006215!1.11e-08!6;UBERON:0003076!2.35e-08!15;UBERON:0003057!2.35e-08!15;UBERON:0000200!4.19e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.07e-23;6!UBERON:0001876;6.48e-18;2!UBERON:0002680;1.13e-15;9!UBERON:0001895;1.13e-15;9!UBERON:0004733;5.08e-12;12!UBERON:0002028;5.08e-12;12!UBERON:0004732;3.56e-11;13!UBERON:0000349;5.73e-08;5!UBERON:0002021;7.01e-08;5!UBERON:0001950;2.77e-07;20!UBERON:0002619;9.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.07e-23,6;UBERON:0006215,6.07e-23,6;UBERON:0001876,5.48e-18,2;UBERON:0002680,1.13e-15,9;UBERON:0001895,1.13e-15,9;UBERON:0010092,1.13e-15,9;UBERON:0004733,5.08e-12,12;UBERON:0002028,5.08e-12,12;UBERON:0007277,5.08e-12,12;UBERON:0004732,3.56e-11,13;UBERON:0000073,2.28e-10,53;UBERON:0002616,2.28e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0000955,4.07e-08,68;UBERON:0006238,4.07e-08,68;UBERON:0000349,5.35e-08,5;UBERON:0002021,7.01e-08,5;UBERON:0001950,2.69e-07,20;UBERON:0001017,6.43e-07,81;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82;UBERON:0002619,9.67e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0,0,0,2.74463030566391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.54332297841817,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0.80057074828547,0,0,0.321146125482298,1.41696576325585,0,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0,0,0,2.74463030566391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.54332297841817,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0.80057074828547,0,0,0.321146125482298,1.41696576325585,0,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p74@ZBTB38 | |short_description=p74@ZBTB38 | ||
}} | }} |
Latest revision as of 03:13, 25 September 2015
Short description: | p74@ZBTB38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_74_at_ZBTB38_5end |
Coexpression cluster: | C710_anaplastic_cerebellum_xeroderma_B_carcinoid_merkel_occipital |
Association with transcript: | -237bp_to_ENST00000507722_5end |
EntrezGene: | ZBTB38 |
HGNC: | 26636 |
UniProt: | D6RHD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.07e-23 | 6 |
rhombic lip | 6.07e-23 | 6 |
amygdala | 5.48e-18 | 2 |
regional part of metencephalon | 1.13e-15 | 9 |
metencephalon | 1.13e-15 | 9 |
future metencephalon | 1.13e-15 | 9 |
segmental subdivision of hindbrain | 5.08e-12 | 12 |
hindbrain | 5.08e-12 | 12 |
presumptive hindbrain | 5.08e-12 | 12 |
segmental subdivision of nervous system | 3.56e-11 | 13 |
regional part of nervous system | 2.28e-10 | 53 |
regional part of brain | 2.28e-10 | 53 |
neural tube | 7.51e-10 | 56 |
neural rod | 7.51e-10 | 56 |
future spinal cord | 7.51e-10 | 56 |
neural keel | 7.51e-10 | 56 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
brain | 4.07e-08 | 68 |
future brain | 4.07e-08 | 68 |
limbic system | 5.35e-08 | 5 |
occipital lobe | 7.01e-08 | 5 |
neocortex | 2.69e-07 | 20 |
central nervous system | 6.43e-07 | 81 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |
regional part of cerebral cortex | 9.67e-07 | 22 |