FFCP PHASE1:Hg19::chr3:141087195..141087230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:141087195..141087230,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr3:141087195..141087230,- | |description=CAGE_peak_at_chr3:141087195..141087230,- | ||
|id=chr3:141087195..141087230,- | |id=chr3:141087195..141087230,- | ||
|ontology_enrichment_celltype=CL:0000548!5.11e-09!679;CL:0000004!5.11e-09!679;CL:0000255!5.11e-09!679;CL:0000012!1.17e-08!682;CL:0000055!2.19e-07!180;CL:0000048!3.44e-07!430;CL:0000723!3.76e-07!436;CL:0000034!9.84e-07!444 | |ontology_enrichment_celltype=CL:0000548!5.11e-09!679;CL:0000004!5.11e-09!679;CL:0000255!5.11e-09!679;CL:0000012!1.17e-08!682;CL:0000055!2.19e-07!180;CL:0000048!3.44e-07!430;CL:0000723!3.76e-07!436;CL:0000034!9.84e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.99e-19;5!CL:0001014;9.91e-13;2!CL:0001016;9.91e-13;2!CL:0002589;6.12e-12;2!CL:0000163;7.68e-11;9!CL:0000319;8.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.00e-19,5;CL:0002028,2.00e-19,5;CL:0001014,9.39e-13,2;CL:0001016,9.39e-13,2;CL:0002589,6.14e-12,2;CL:0000163,7.70e-11,9;CL:0000319,6.38e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;8.47e-07;1!DOID:0070004;8.47e-07;1!DOID:3030;8.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,6.02e-07,1;DOID:0070004,6.02e-07,1;DOID:3030,6.38e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.91e-09!167;UBERON:0004573!1.42e-07!33;UBERON:0004571!1.42e-07!33;UBERON:0000926!1.57e-07!448;UBERON:0004120!1.57e-07!448;UBERON:0006603!1.57e-07!448;UBERON:0001637!8.19e-07!42;UBERON:0003509!8.19e-07!42;UBERON:0004572!8.19e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;6.12e-12;2!UBERON:0007204;6.12e-12;2!UBERON:0004573;3.59e-09;33!UBERON:0004571;3.59e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,6.14e-12,2;UBERON:0007204,6.14e-12,2;UBERON:0004573,1.29e-09,33;UBERON:0004571,1.29e-09,33;UBERON:0003081,9.52e-09,203;UBERON:0000926,2.41e-08,315;UBERON:0004120,2.41e-08,315;UBERON:0006603,2.41e-08,315;UBERON:0001637,2.64e-07,42;UBERON:0003509,2.64e-07,42;UBERON:0004572,2.64e-07,42;UBERON:0002390,3.07e-07,98;UBERON:0003061,3.07e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.436194716338694,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0,0.689491361473237,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.75374599577023,0,1.73751075764093,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,1.13061588384802,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,3.31022952033047,1.72101972449288,0.709336764396714,0,0,0.49333509683432,0,0,0.653847612453835,0.302714855289863,0,0,0.312160076830321,1.1409436430889,0,0.23486899728753,0.323745888736263,0.702254033511242,0.61246251376468,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.375355559615893,0.554128230968366,0,0.30648779579902,0,0.226864366320042,0.717558542755448,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,0.710019185033229,0,0.339121184620975,0,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0.404493924480493,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,5.91195885475132,0,10.9883901236609,4.75595846275973,4.03975786964416,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.585707074963566,0.300946099727719,0,0,0,0,0.434418072340414,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.532685175939381,0.98552587216571,0,0.348631135379878,0,0,0,0.34444334449382,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.893288987462089,0.10115778085555,0,1.88887408098384,0,0,0.532306030317022,1.73986598415015,1.29726953372744,1.14499909393593,0.372158369359667,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,1.10273068709225,0,0,0,0.655894752046633,0.202910376962704,0,0.845086807596724,0.573645408816206,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,1.39203086947621,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0.667852230137435,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0.156980256395025,0,0,0.19606253431774,0.503464760927528,0.189753732724185,0,0,0,0,0,0,0,0,18.0877888495179,3.58335422944858,2.08843899010911,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0.751617097072463,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0.522355239482415,0,0.343972064943233,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0.864328787928898,0.124252535565433,0.471388069233591,0,0,0.407992870545287,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0.321506296930038,0,0,2.69968669861801,3.0952078182318,0,0,0,0.157363764404994,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0.492555124496034,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr3:141087195..141087230,- | |short_description=p@chr3:141087195..141087230,- | ||
}} | }} |
Latest revision as of 16:23, 29 July 2015
Short description: | p@chr3:141087195..141087230, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:141087195..141087230, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.00e-19 | 5 |
basophil mast progenitor cell | 2.00e-19 | 5 |
CD1a-positive Langerhans cell | 9.39e-13 | 2 |
immature CD1a-positive Langerhans cell | 9.39e-13 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 6.14e-12 | 2 |
endocrine cell | 7.70e-11 | 9 |
mucus secreting cell | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 6.14e-12 | 2 |
brachiocephalic vasculature | 6.14e-12 | 2 |
systemic artery | 1.29e-09 | 33 |
systemic arterial system | 1.29e-09 | 33 |
lateral plate mesoderm | 9.52e-09 | 203 |
mesoderm | 2.41e-08 | 315 |
mesoderm-derived structure | 2.41e-08 | 315 |
presumptive mesoderm | 2.41e-08 | 315 |
artery | 2.64e-07 | 42 |
arterial blood vessel | 2.64e-07 | 42 |
arterial system | 2.64e-07 | 42 |
hematopoietic system | 3.07e-07 | 98 |
blood island | 3.07e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 6.02e-07 | 1 |
myeloma | 6.02e-07 | 1 |
mucinous adenocarcinoma | 6.38e-07 | 1 |