FFCP PHASE1:Hg19::chrX:38429964..38429975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7102 | |EntrezGene=7102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11854 | |HGNC=11854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000488893_5end | |association_with_transcript=28bp_to_ENST00000488893_5end | ||
|cluster_id=chrX:38429964..38429975,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_11_at_TSPAN7_5end | |description=CAGE_peak_11_at_TSPAN7_5end | ||
|id=chrX:38429964..38429975,+ | |id=chrX:38429964..38429975,+ | ||
|ontology_enrichment_celltype=CL:0000319!2.09e-07!1 | |ontology_enrichment_celltype=CL:0000319!2.09e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.23e-66;1!CL:0000159;3.61e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.23e-66,1;CL:0000159,3.61e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!2.09e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.23e-66;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.23e-66,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.39e-40!32;UBERON:0001893!7.61e-38!34;UBERON:0001950!5.13e-36!20;UBERON:0002791!3.10e-34!33;UBERON:0002020!3.64e-33!34;UBERON:0003528!3.64e-33!34;UBERON:0002619!1.12e-32!22;UBERON:0002780!5.80e-31!41;UBERON:0001890!5.80e-31!41;UBERON:0006240!5.80e-31!41;UBERON:0003080!3.66e-30!42;UBERON:0000956!1.23e-28!25;UBERON:0000203!1.23e-28!25;UBERON:0001871!1.17e-24!7;UBERON:0000200!8.31e-23!6;UBERON:0001017!2.11e-22!82;UBERON:0000955!8.22e-22!69;UBERON:0006238!8.22e-22!69;UBERON:0001049!1.81e-21!57;UBERON:0005068!1.81e-21!57;UBERON:0006241!1.81e-21!57;UBERON:0007135!1.81e-21!57;UBERON:0005743!3.46e-21!86;UBERON:0002616!1.22e-20!59;UBERON:0003056!7.31e-20!61;UBERON:0000073!8.08e-19!94;UBERON:0001016!8.08e-19!94;UBERON:0000033!3.47e-17!123;UBERON:0003075!5.08e-17!86;UBERON:0007284!5.08e-17!86;UBERON:0007023!6.04e-17!115;UBERON:0002771!6.16e-17!3;UBERON:0002420!3.49e-16!9;UBERON:0007245!3.49e-16!9;UBERON:0010009!3.49e-16!9;UBERON:0010011!3.49e-16!9;UBERON:0000454!3.49e-16!9;UBERON:0000153!3.51e-16!129;UBERON:0007811!3.51e-16!129;UBERON:0002346!4.21e-16!90;UBERON:0000369!6.10e-14!4;UBERON:0002435!6.10e-14!4;UBERON:0000204!6.10e-14!4;UBERON:0010082!6.10e-14!4;UBERON:0001876!1.18e-12!2;UBERON:0002360!6.49e-12!2;UBERON:0000094!6.49e-12!2;UBERON:0007645!6.49e-12!2;UBERON:0004121!4.28e-11!169;UBERON:0000349!4.52e-11!5;UBERON:0000924!9.77e-11!173;UBERON:0006601!9.77e-11!173;UBERON:0005383!6.42e-09!3;UBERON:0005382!6.42e-09!3;UBERON:0009663!3.71e-08!7;UBERON:0004111!1.84e-07!241;UBERON:0001874!2.22e-07!1;UBERON:0000025!2.49e-07!194;UBERON:0003112!3.17e-07!1;UBERON:0000032!3.17e-07!1;UBERON:0005253!3.17e-07!1;UBERON:0003128!3.17e-07!1;UBERON:0002241!3.17e-07!1;UBERON:0001703!3.17e-07!1;UBERON:0004761!3.17e-07!1;UBERON:0009617!3.17e-07!1;UBERON:0001882!3.57e-07!1;UBERON:0005403!3.57e-07!1;UBERON:0002581!4.78e-07!1;UBERON:0000477!4.81e-07!286;UBERON:0002022!5.06e-07!1;UBERON:0002902!5.69e-07!1;UBERON:0009899!5.69e-07!1;UBERON:0007190!7.57e-07!1;UBERON:0000064!8.31e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;3.34e-66;1!UBERON:0005383;3.66e-23;3!UBERON:0005382;3.66e-23;3!UBERON:0000369;9.45e-18;4!UBERON:0002435;9.45e-18;4!UBERON:0000204;9.45e-18;4!UBERON:0009663;9.43e-11;7!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.39e-66,1;UBERON:0005383,3.27e-23,3;UBERON:0005382,3.27e-23,3;UBERON:0000369,8.69e-18,4;UBERON:0002435,8.69e-18,4;UBERON:0000204,8.69e-18,4;UBERON:0010082,8.69e-18,4;UBERON:0009663,8.99e-11,7;UBERON:0002420,1.12e-08,9;UBERON:0000125,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9 | |||
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|short_description=p11@TSPAN7 | |short_description=p11@TSPAN7 | ||
}} | }} |
Latest revision as of 00:06, 25 September 2015
Short description: | p11@TSPAN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TSPAN7_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 28bp_to_ENST00000488893_5end |
EntrezGene: | TSPAN7 |
HGNC: | 11854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.23e-66 | 1 |
seromucus secreting cell | 3.61e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
putamen | 2.39e-66 | 1 |
caudate-putamen | 3.27e-23 | 3 |
dorsal striatum | 3.27e-23 | 3 |
corpus striatum | 8.69e-18 | 4 |
striatum | 8.69e-18 | 4 |
ventral part of telencephalon | 8.69e-18 | 4 |
future corpus striatum | 8.69e-18 | 4 |
telencephalic nucleus | 8.99e-11 | 7 |
basal ganglion | 1.12e-08 | 9 |
neural nucleus | 1.12e-08 | 9 |
nuclear complex of neuraxis | 1.12e-08 | 9 |
nucleus of brain | 1.12e-08 | 9 |
aggregate regional part of brain | 1.12e-08 | 9 |
collection of basal ganglia | 1.12e-08 | 9 |
cerebral subcortex | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.23e-66 | 1 |