FFCP PHASE1:Hg19::chrX:19906013..19906024,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30011 | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |HGNC=13867 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JPT6,Q96B97 | |UniProt=Q5JPT6,Q96B97 | ||
|association_with_transcript=-269bp_to_NM_031892,uc004czm.2_5end | |association_with_transcript=-269bp_to_NM_031892,uc004czm.2_5end | ||
|cluster_id=chrX:19906013..19906024,- | |||
|description=CAGE_peak_16_at_SH3KBP1_5end | |description=CAGE_peak_16_at_SH3KBP1_5end | ||
|id=chrX:19906013..19906024,- | |id=chrX:19906013..19906024,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;4.85e-09;3!CL:0002581;7.47e-08;1!CL:0002032;2.13e-07;1!CL:0000037;2.13e-07;1!CL:0000222;2.13e-07;1!CL:0001024;2.13e-07;1!CL:0000557;2.13e-07;1!CL:0002566;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.13e-08,3;CL:0002581,6.59e-08,1;CL:0001024,2.66e-07,1;CL:0002566,4.61e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.61e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004765;1.42e-10;26!UBERON:0002242;4.85e-09;3!UBERON:0002371;2.90e-08;12!UBERON:0001474;3.05e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,1.13e-08,3;UBERON:0003068,1.13e-08,3;UBERON:0002328,1.13e-08,3;UBERON:0004880,1.13e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.61560529038394,0,0.313454721478088,0,0,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.189069634328136,0.886917589850256,0.43917392846563,0.0654895377488563,0,0,0,0,0.26591592103773,0.715471872916026,0,0.74291500265913,0,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.412210116953756,0.257640540045629,0.18611685633159,0,0.389748020644795,0,0.460249493211497,0.161646056818812,0,0.201504196455281,0,0,0,0.286804595389004,0,0.265059536642971,0,0.207322110030741,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0.354920400119532,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,1.32438929824395,0.245976877086227,0.171567810298526,0.439001141634502,0,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0,1.0159663086747,0,0,1.71072446022705,0,0.300343057843917,1.42913216315289,0,0.43596006883328,0.1466765716419,0,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.358121926479791,0.224170287987055,0,0,0,0,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,1.08506009479894,0.831883446123229,1.07057393278297,0.946214490203608,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0.460385919864187,1.40330047216537,0.512556597022804,0,0.321707842287215,2.96836132889982,0.154209693802656,0.355123450626254,0,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0.863663664408557,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.190630193923825,0,1.71175595213568,0,0,0.179872457583315,0,0.235624804691373,0,0,0.842516912477962,0,0.487426979262569,0,0,0.424216295861138,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0.6196469961995,0,0.286822704408103,0.687743287091848,0,0,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0,0.557409525377156,0.432807638929335,0.142283686696828,0.159426272728822,0.399158742865633,0,0,0.649243880549111,0,0.684704037099577,0.47003968731907,0,0,0.321176150207399,0.403599414382095,1.70338495076131,0,0,0,0.333698283423817,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0,0.728163130497081,0,0.284136146806413,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0.422250816255987,0,0,0,0.511343412510774,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0,1.77148277162768,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0.455768223388005,0.46112780877612,0,0.217294743844016,0,0.183195186803725,0,1.02193298195737,0,0.498635045700469,0.225595660617181,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0.971121518136371,0,0,0.30607276163049,0,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0.520679215005393,0,0,0,0.343972064943233,0.290268993867255,0,0.0821154570532092,0,0.176512253383001,0,0.274083849293502,0,0.379864775735272,0,0,0,0.39961921916426,0.432271251462318,0.458146384663663,0.171594997861965,0,0,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,1.27746588066972,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0.2249738915515,0,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0.211200673038813,0.35857467866569,0.383830394638891,0,0,0.25426853765475,0,0,0,1.19730191562487,0.410462603746695,0.170388021785422,0.453248366080503,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0.638341257770182,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0,0.18628920882415,0.276697269872462,0,0.758245587708239,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,1.26184898228651,0.57785949122191,0.428883182749851,0,0,0.231522474323834,0.244736704506468,0.537266523244462,0,0.438568099157414,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0,0,1.0629187225069,0.490696182767533,0.655219697692825,0,0.211312123358627,0,0.746842107858986,0.172214979660816,0,0,0,0,0.127894371303652,0,0.471797825567689,0.218419276384028,0.848662649770126,0.425149840203366,0.495743057036009,2.23457967189298,0.954013051960256,0.157723490002507,0,0.705351887381368,0.3062454773532,0.385375350578757,0,0,0.205116364240755,0.756215088665154,0,0.484426936895553,0,0.0981477185010256,0.11796972334774,0,0.231051332300676,1.1441462864015,1.3807198521202,0.198916222116275,0,0,0,0,0.327543835020193,0.147856086217045,0.202612753855184,0.781078098613847,0.206686796501184,0.126831620387814,1.09394961803644,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0.236387681767936,0.111231401892069,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.62041277132864,0.955538938977433,0.335566295393377,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0.83244063544298,0.22589216407792,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0.8453114551668,0.339854229375634,0,0,0.0999411559249289,0.357107877211315,0,0.160482733378337,0,0,0,0.157771562193185,0.543931921527318,0.872701380680755,0,0.371995018166751,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.186224142887574,0.448527450322454,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.269475606319761,0,0.122241444182866,0,0,0,0.641136984606466 | |phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.61560529038394,0,0.313454721478088,0,0,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.189069634328136,0.886917589850256,0.43917392846563,0.0654895377488563,0,0,0,0,0.26591592103773,0.715471872916026,0,0.74291500265913,0,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.412210116953756,0.257640540045629,0.18611685633159,0,0.389748020644795,0,0.460249493211497,0.161646056818812,0,0.201504196455281,0,0,0,0.286804595389004,0,0.265059536642971,0,0.207322110030741,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0.354920400119532,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,1.32438929824395,0.245976877086227,0.171567810298526,0.439001141634502,0,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0,1.0159663086747,0,0,1.71072446022705,0,0.300343057843917,1.42913216315289,0,0.43596006883328,0.1466765716419,0,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.358121926479791,0.224170287987055,0,0,0,0,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,1.08506009479894,0.831883446123229,1.07057393278297,0.946214490203608,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0.460385919864187,1.40330047216537,0.512556597022804,0,0.321707842287215,2.96836132889982,0.154209693802656,0.355123450626254,0,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0.863663664408557,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.190630193923825,0,1.71175595213568,0,0,0.179872457583315,0,0.235624804691373,0,0,0.842516912477962,0,0.487426979262569,0,0,0.424216295861138,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0.6196469961995,0,0.286822704408103,0.687743287091848,0,0,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0,0.557409525377156,0.432807638929335,0.142283686696828,0.159426272728822,0.399158742865633,0,0,0.649243880549111,0,0.684704037099577,0.47003968731907,0,0,0.321176150207399,0.403599414382095,1.70338495076131,0,0,0,0.333698283423817,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0,0.728163130497081,0,0.284136146806413,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0.422250816255987,0,0,0,0.511343412510774,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0,1.77148277162768,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0.455768223388005,0.46112780877612,0,0.217294743844016,0,0.183195186803725,0,1.02193298195737,0,0.498635045700469,0.225595660617181,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0.971121518136371,0,0,0.30607276163049,0,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0.520679215005393,0,0,0,0.343972064943233,0.290268993867255,0,0.0821154570532092,0,0.176512253383001,0,0.274083849293502,0,0.379864775735272,0,0,0,0.39961921916426,0.432271251462318,0.458146384663663,0.171594997861965,0,0,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,1.27746588066972,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0.2249738915515,0,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0.211200673038813,0.35857467866569,0.383830394638891,0,0,0.25426853765475,0,0,0,1.19730191562487,0.410462603746695,0.170388021785422,0.453248366080503,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0.638341257770182,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0,0.18628920882415,0.276697269872462,0,0.758245587708239,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,1.26184898228651,0.57785949122191,0.428883182749851,0,0,0.231522474323834,0.244736704506468,0.537266523244462,0,0.438568099157414,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0,0,1.0629187225069,0.490696182767533,0.655219697692825,0,0.211312123358627,0,0.746842107858986,0.172214979660816,0,0,0,0,0.127894371303652,0,0.471797825567689,0.218419276384028,0.848662649770126,0.425149840203366,0.495743057036009,2.23457967189298,0.954013051960256,0.157723490002507,0,0.705351887381368,0.3062454773532,0.385375350578757,0,0,0.205116364240755,0.756215088665154,0,0.484426936895553,0,0.0981477185010256,0.11796972334774,0,0.231051332300676,1.1441462864015,1.3807198521202,0.198916222116275,0,0,0,0,0.327543835020193,0.147856086217045,0.202612753855184,0.781078098613847,0.206686796501184,0.126831620387814,1.09394961803644,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0.236387681767936,0.111231401892069,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.62041277132864,0.955538938977433,0.335566295393377,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0.83244063544298,0.22589216407792,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0.8453114551668,0.339854229375634,0,0,0.0999411559249289,0.357107877211315,0,0.160482733378337,0,0,0,0.157771562193185,0.543931921527318,0.872701380680755,0,0.371995018166751,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.186224142887574,0.448527450322454,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.269475606319761,0,0.122241444182866,0,0,0,0.641136984606466 | ||
|short_description=p16@SH3KBP1 | |short_description=p16@SH3KBP1 | ||
}} | }} |
Latest revision as of 15:49, 24 September 2015
Short description: | p16@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SH3KBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -269bp_to_NM_031892, uc004czm.2_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | Q5JPT6Q96B97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.13e-08 | 3 |
perirenal preadipocyte | 6.59e-08 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.66e-07 | 1 |
dark melanocyte | 4.61e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 1.13e-08 | 3 |
axial mesoderm | 1.13e-08 | 3 |
notochord | 1.13e-08 | 3 |
chordamesoderm | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.61e-07 | 1 |