FFCP PHASE1:Hg19::chr3:111578076..111578080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90102 | |EntrezGene=90102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29573 | |HGNC=29573 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SQ0 | |UniProt=Q86SQ0 | ||
|association_with_transcript=49bp_to_ENST00000412622,ENST00000431670,NM_001134438,NM_145753,uc003dyd.2,uc010hqa.2_5end | |association_with_transcript=49bp_to_ENST00000412622,ENST00000431670,NM_001134438,NM_145753,uc003dyd.2,uc010hqa.2_5end | ||
|cluster_id=chr3:111578076..111578080,+ | |||
|description=CAGE_peak_8_at_PHLDB2_5end | |description=CAGE_peak_8_at_PHLDB2_5end | ||
|id=chr3:111578076..111578080,+ | |id=chr3:111578076..111578080,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.55e-12!254 | |ontology_enrichment_celltype=CL:0000066!3.55e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:1000415;8.79e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,8.85e-10,2;CL:0000066,9.79e-10,253;CL:0000240,9.65e-07,6;CL:0000311,9.65e-07,6;CL:0000079,9.65e-07,6;CL:0000237,9.65e-07,6;CL:0000036,9.65e-07,6;CL:0000357,9.65e-07,6;CL:0000114,9.65e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.52e-12!143;DOID:305!1.47e-11!106 | |ontology_enrichment_disease=DOID:0050687!6.52e-12!143;DOID:305!1.47e-11!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.20e-10,106;DOID:0050687,1.79e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.13e-14!169;UBERON:0000925!5.13e-14!169;UBERON:0006595!5.13e-14!169;UBERON:0001007!4.27e-12!155;UBERON:0001555!4.27e-12!155;UBERON:0007026!4.27e-12!155;UBERON:0000077!3.24e-10!130;UBERON:0004921!1.30e-09!129;UBERON:0004185!1.30e-09!129;UBERON:0000161!3.81e-08!35;UBERON:0003929!1.24e-07!54;UBERON:0005631!4.32e-07!14;UBERON:0000158!4.32e-07!14;UBERON:0005911!8.65e-07!82 | |ontology_enrichment_uberon=UBERON:0004119!5.13e-14!169;UBERON:0000925!5.13e-14!169;UBERON:0006595!5.13e-14!169;UBERON:0001007!4.27e-12!155;UBERON:0001555!4.27e-12!155;UBERON:0007026!4.27e-12!155;UBERON:0000077!3.24e-10!130;UBERON:0004921!1.30e-09!129;UBERON:0004185!1.30e-09!129;UBERON:0000161!3.81e-08!35;UBERON:0003929!1.24e-07!54;UBERON:0005631!4.32e-07!14;UBERON:0000158!4.32e-07!14;UBERON:0005911!8.65e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;5.72e-10;7!UBERON:0001173;5.72e-10;7!UBERON:0002110;8.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.20e-10,14;UBERON:0000158,2.20e-10,14;UBERON:0002294,7.61e-08,9;UBERON:0001173,7.61e-08,9;UBERON:0004912,7.61e-08,9;UBERON:0002110,8.98e-07,3;UBERON:0006242,8.98e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,1.31064823278103,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.58891016975863,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.709840800239063,0.168584690078102,0.241011029883482,0.441175890929576,1.08939722046203,1.18635309555548,0.539325232640658,0.98110732562673,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.09750285408626,0,2.51322431029077,1.574003567695,0,0,1.44331342025273,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,1.07470227243418,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0.791951872933429,2.41151501647669,0,0.799783929456456,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.356857977594324,0.315404830067869,0.702848489956279,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,3.32870879020994,0.604780586659361,0,0.306923946576125,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0.803701137152247,0,0.393373244878272,0,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.429680979473094,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.893288987462089,0.2023155617111,0,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.785992328104969,1.426684205925,0,0,0,0.379473173765715,0,0.48111056362756,0,0,2.44773882019626,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,1.48482340416319,0.307160702099232,0,0,0.556543525114529,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.359473404589307,1.79021174675609,0,0.493217028184668,0,0,0,0.0927680981618513,0,0.520855522170466,0.174919999992391,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.544692317594951,1.11538995422883,0,2.27884111694002,0,0.807818799687949,0.325942115766024,2.55200927785536,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.208843899010911,0,0.802577647298789,0,0,0.586993856796269,0,0,0,0,1.13735843331278,0,0,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0.293977192243133,1.39294730528644,0.52418000472609,0.171986032471617,0.870806981601766,1.0232504392066,1.23173185579814,0.290967049465258,0,0.225980740780532,0.685209623233754,0,0,2.15106521008283,2.72539988855215,0.213452994739353,0.19980960958213,0,0,0,1.29649318189335,0,2.35694034616795,0.271808412147228,0.313808538937,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,2.30298236783334,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0.339936274560377,0,0,0,0,0.684347351537318,0,0.320362237703084,0,0,0,0,0,0,2.1760712134779,0.7520696820681,1.83807346058077,0.655745261419609,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,0.796191777397232,0,0,0,0,0.57785949122191,0,0.782982875895635,0.226705925512272,0,0.97894681802587,0,0,0.438568099157414,0,0.192914038270915,0.675769762612291,0.256241518587947,0,0.303859956177382,0,0,0,0.163565394255844,0.327609848846413,1.2288645437686,1.05656061679314,0,0,0,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.294443155503077,0,0.733714394086716,0.231051332300676,0,0,0,0.150420656698515,0.80682027481408,0,1.57144016688853,1.63771917510097,0.4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| ||
|short_description=p8@PHLDB2 | |short_description=p8@PHLDB2 | ||
}} | }} |
Latest revision as of 12:51, 19 September 2015
Short description: | p8@PHLDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PHLDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000412622, ENST00000431670, NM_001134438, NM_145753, uc003dyd.2, uc010hqa.2_5end |
EntrezGene: | PHLDB2 |
HGNC: | 29573 |
UniProt: | Q86SQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 8.85e-10 | 2 |
epithelial cell | 9.79e-10 | 253 |
stratified squamous epithelial cell | 9.65e-07 | 6 |
keratin accumulating cell | 9.65e-07 | 6 |
stratified epithelial cell | 9.65e-07 | 6 |
keratinizing barrier epithelial cell | 9.65e-07 | 6 |
epithelial fate stem cell | 9.65e-07 | 6 |
stratified epithelial stem cell | 9.65e-07 | 6 |
surface ectodermal cell | 9.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.20e-10 | 14 |
membranous layer | 2.20e-10 | 14 |
biliary system | 7.61e-08 | 9 |
biliary tree | 7.61e-08 | 9 |
biliary bud | 7.61e-08 | 9 |
gallbladder | 8.98e-07 | 3 |
gall bladder primordium | 8.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.20e-10 | 106 |
cell type cancer | 1.79e-07 | 143 |