FFCP PHASE1:Hg19::chr3:101039335..101039344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50939 | |EntrezGene=50939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18362 | |HGNC=18362 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000193391_5end | |association_with_transcript=59bp_to_ENST00000193391_5end | ||
|cluster_id=chr3:101039335..101039344,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_IMPG2_5end | |description=CAGE_peak_4_at_IMPG2_5end | ||
|id=chr3:101039335..101039344,- | |id=chr3:101039335..101039344,- | ||
|ontology_enrichment_celltype=CL:0000243!8.11e-07!15;CL:0000125!8.11e-07!15;CL:0000030!8.11e-07!15;CL:0000339!8.11e-07!15 | |ontology_enrichment_celltype=CL:0000243!8.11e-07!15;CL:0000125!8.11e-07!15;CL:0000030!8.11e-07!15;CL:0000339!8.11e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000243;2.52e-10;15!CL:0000125;2.52e-10;15!CL:0000095;2.41e-09;17!CL:0002319;7.34e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.46e-10,15;CL:0000125,2.46e-10,15;CL:0000030,2.46e-10,15;CL:0000339,2.46e-10,15;CL:0000095,2.36e-09,17;CL:0000123,2.36e-09,17;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-15;10!UBERON:0003056;1.60e-14;3!CL:0000339;2.52e-10;15!UBERON:0006601;6.69e-08;82 | |||
|ontology_enrichment_disease=DOID:3093!2.77e-09!11;DOID:5409!1.92e-07!4 | |ontology_enrichment_disease=DOID:3093!2.77e-09!11;DOID:5409!1.92e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.47e-14;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.36e-14,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!8.82e-51!2;UBERON:0002757!8.82e-51!2;UBERON:0010134!8.82e-51!2;UBERON:0002784!8.82e-51!2;UBERON:0005408!8.82e-51!2;UBERON:0001899!8.82e-51!2;UBERON:0003296!5.23e-26!4;UBERON:0010133!5.23e-26!4;UBERON:0001894!2.47e-15!7;UBERON:0006222!2.47e-15!7;UBERON:0002360!1.07e-13!2;UBERON:0000094!1.07e-13!2;UBERON:0007645!1.07e-13!2;UBERON:0002148!1.55e-13!2;UBERON:0009662!1.55e-13!2;UBERON:0001017!9.26e-11!82;UBERON:0005743!2.83e-10!86;UBERON:0000988!1.81e-09!3;UBERON:0006331!1.81e-09!3;UBERON:0000073!2.52e-09!94;UBERON:0001016!2.52e-09!94;UBERON:0000955!5.26e-09!69;UBERON:0006238!5.26e-09!69;UBERON:0003075!2.26e-07!86;UBERON:0007284!2.26e-07!86;UBERON:0002346!4.70e-07!90 | |ontology_enrichment_uberon=UBERON:0001905!8.82e-51!2;UBERON:0002757!8.82e-51!2;UBERON:0010134!8.82e-51!2;UBERON:0002784!8.82e-51!2;UBERON:0005408!8.82e-51!2;UBERON:0001899!8.82e-51!2;UBERON:0003296!5.23e-26!4;UBERON:0010133!5.23e-26!4;UBERON:0001894!2.47e-15!7;UBERON:0006222!2.47e-15!7;UBERON:0002360!1.07e-13!2;UBERON:0000094!1.07e-13!2;UBERON:0007645!1.07e-13!2;UBERON:0002148!1.55e-13!2;UBERON:0009662!1.55e-13!2;UBERON:0001017!9.26e-11!82;UBERON:0005743!2.83e-10!86;UBERON:0000988!1.81e-09!3;UBERON:0006331!1.81e-09!3;UBERON:0000073!2.52e-09!94;UBERON:0001016!2.52e-09!94;UBERON:0000955!5.26e-09!69;UBERON:0006238!5.26e-09!69;UBERON:0003075!2.26e-07!86;UBERON:0007284!2.26e-07!86;UBERON:0002346!4.70e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0002360;6.30e-21;2!UBERON:0000094;6.30e-21;2!UBERON:0010743;6.30e-21;2!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0001017;6.06e-08;75!UBERON:0000955;3.38e-07;68!UBERON:0001016;6.88e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0002360,6.96e-21,2;UBERON:0000094,6.96e-21,2;UBERON:0010743,6.96e-21,2;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6 | |||
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|short_description=p4@IMPG2 | |short_description=p4@IMPG2 | ||
}} | }} |
Latest revision as of 06:31, 19 September 2015
Short description: | p4@IMPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IMPG2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 59bp_to_ENST00000193391_5end |
EntrezGene: | IMPG2 |
HGNC: | 18362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.46e-10 | 15 |
glial cell | 2.46e-10 | 15 |
glioblast | 2.46e-10 | 15 |
glioblast (sensu Vertebrata) | 2.46e-10 | 15 |
neuron associated cell | 2.36e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-09 | 17 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
meninx | 6.96e-21 | 2 |
membrane organ | 6.96e-21 | 2 |
meningeal cluster | 6.96e-21 | 2 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.36e-14 | 11 |