FFCP PHASE1:Hg19::chr14:75079261..75079277,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:75079261..75079277,-
|short_description=p9@LTBP2
|description=CAGE_peak_9_at_LTBP2_5end
|association_with_transcript=28bp_to_ENST00000556359_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt=G3V254 | |UniProt=G3V254 | ||
|association_with_transcript=28bp_to_ENST00000556359_5end | |||
|cluster_id=chr14:75079261..75079277,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_9_at_LTBP2_5end | |||
|id=chr14:75079261..75079277,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-21!180;CL:0002371!1.15e-16!591;CL:0000057!4.24e-16!75;CL:0000222!1.03e-15!119;CL:0000144!1.57e-14!625;CL:0000359!6.78e-14!32;CL:0000220!8.64e-13!246;CL:0002321!2.38e-12!248;CL:0002139!8.49e-12!24;CL:0000183!8.54e-12!59;CL:0000071!1.06e-10!18;CL:0002546!1.06e-10!18;CL:0000680!1.14e-10!57;CL:0000056!1.14e-10!57;CL:0000355!1.14e-10!57;CL:0000192!2.30e-10!42;CL:0000514!2.30e-10!42;CL:0000115!1.15e-09!35;CL:0000548!1.26e-09!679;CL:0000004!1.26e-09!679;CL:0000255!1.26e-09!679;CL:0000187!1.90e-09!54;CL:0000012!3.52e-09!682;CL:0002334!8.08e-08!12;CL:1000413!1.03e-07!9;CL:0002078!1.10e-07!44;CL:0000393!1.72e-07!60;CL:0000211!1.72e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.55e-16;32!CL:0002139;2.23e-13;24!CL:0000071;3.38e-13;18!CL:0002334;5.60e-11;12!CL:1000413;1.06e-10;9!CL:0000192;1.38e-10;43!CL:0000115;2.96e-10;36!CL:0002543;7.47e-08;6!CL:0002544;2.02e-07;6!CL:0002078;6.70e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.03e-18,121;CL:0000359,1.36e-16,32;CL:0002139,2.01e-13,24;CL:0000071,2.88e-13,18;CL:0002546,2.88e-13,18;CL:0000192,4.78e-13,43;CL:0000514,4.78e-13,43;CL:0000057,2.03e-12,76;CL:0002321,1.21e-11,250;CL:0000680,1.40e-11,58;CL:0000056,1.40e-11,58;CL:0000355,1.40e-11,58;CL:0000115,3.41e-11,36;CL:0002334,5.64e-11,12;CL:1000413,8.08e-11,9;CL:0002078,5.23e-10,45;CL:0000187,6.08e-10,55;CL:0000393,4.09e-08,61;CL:0000211,4.09e-08,61;CL:0002543,8.02e-08,6;CL:0002544,1.54e-07,6;CL:0000213,1.82e-07,58;CL:0000215,1.82e-07,58;CL:0000723,8.68e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;3.38e-13;18!CL:0000514;1.38e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!3.02e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.85e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.69e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.49e-27!79;UBERON:0007798!3.49e-27!79;UBERON:0004872!9.43e-26!84;UBERON:0000055!1.93e-24!69;UBERON:0001981!2.30e-24!60;UBERON:0007500!2.30e-24!60;UBERON:0004537!2.30e-24!60;UBERON:0006965!2.30e-24!60;UBERON:0001637!1.41e-22!42;UBERON:0003509!1.41e-22!42;UBERON:0004572!1.41e-22!42;UBERON:0004535!8.64e-21!110;UBERON:0001009!1.56e-20!113;UBERON:0003914!2.38e-20!118;UBERON:0004573!4.97e-17!33;UBERON:0004571!4.97e-17!33;UBERON:0000119!4.93e-14!312;UBERON:0000483!2.64e-13!309;UBERON:0000486!3.41e-13!82;UBERON:0000914!4.79e-13!83;UBERON:0002329!4.79e-13!83;UBERON:0003077!4.79e-13!83;UBERON:0003059!4.79e-13!83;UBERON:0007282!4.79e-13!83;UBERON:0009618!4.79e-13!83;UBERON:0007285!4.79e-13!83;UBERON:0000490!6.10e-13!138;UBERON:0000947!3.07e-11!21;UBERON:0010191!3.07e-11!21;UBERON:0001986!1.06e-10!18;UBERON:0004638!1.06e-10!18;UBERON:0004852!1.06e-10!18;UBERON:0005256!1.96e-10!143;UBERON:0002385!3.44e-10!63;UBERON:0001015!3.44e-10!63;UBERON:0000383!3.44e-10!63;UBERON:0004290!4.03e-10!70;UBERON:0001134!4.36e-10!61;UBERON:0002036!4.36e-10!61;UBERON:0003082!4.36e-10!61;UBERON:0000468!9.53e-10!659;UBERON:0000477!1.15e-09!286;UBERON:0000487!1.96e-09!22;UBERON:0006914!2.06e-09!25;UBERON:0000467!2.15e-09!625;UBERON:0000480!2.99e-09!626;UBERON:0004111!6.04e-09!241;UBERON:0003102!1.04e-08!95;UBERON:0000475!1.96e-08!365;UBERON:0003915!1.03e-07!9;UBERON:0004700!1.03e-07!9;UBERON:0001917!1.03e-07!9;UBERON:0002100!2.32e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.27e-23;42!UBERON:0003509;1.27e-23;42!UBERON:0004572;1.27e-23;42!UBERON:0004573;5.82e-21;33!UBERON:0004571;5.82e-21;33!UBERON:0007500;3.14e-15;56!UBERON:0001981;3.14e-15;56!UBERON:0004537;3.14e-15;56!UBERON:0000947;8.82e-15;21!UBERON:0010191;8.82e-15;21!UBERON:0002049;1.03e-13;75!UBERON:0007798;1.03e-13;75!UBERON:0004638;3.38e-13;18!UBERON:0001986;3.38e-13;18!UBERON:0004852;3.38e-13;18!UBERON:0003914;4.54e-13;74!UBERON:0000055;1.09e-12;65!UBERON:0006914;8.32e-12;25!UBERON:0000487;2.25e-11;22!UBERON:0003915;1.06e-10;9!UBERON:0004700;1.06e-10;9!UBERON:0001917;1.06e-10;9!UBERON:0000490;7.04e-10;33!UBERON:0000025;5.25e-08;93!UBERON:0010260;1.02e-07;9!UBERON:0004535;1.02e-07;109!UBERON:0000119;2.72e-07;139!UBERON:0000483;3.13e-07;136!UBERON:0001009;6.92e-07;112!UBERON:0002118;7.01e-07;5 | |||
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| ||
|short_description=p9@LTBP2 | |||
}} | }} |
Latest revision as of 01:26, 16 September 2015
Short description: | p9@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 28bp_to_ENST00000556359_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.03e-18 | 121 |
vascular associated smooth muscle cell | 1.36e-16 | 32 |
endothelial cell of vascular tree | 2.01e-13 | 24 |
blood vessel endothelial cell | 2.88e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-13 | 18 |
smooth muscle cell | 4.78e-13 | 43 |
smooth muscle myoblast | 4.78e-13 | 43 |
fibroblast | 2.03e-12 | 76 |
embryonic cell | 1.21e-11 | 250 |
muscle precursor cell | 1.40e-11 | 58 |
myoblast | 1.40e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-11 | 58 |
endothelial cell | 3.41e-11 | 36 |
preadipocyte | 5.64e-11 | 12 |
endothelial cell of artery | 8.08e-11 | 9 |
meso-epithelial cell | 5.23e-10 | 45 |
muscle cell | 6.08e-10 | 55 |
electrically responsive cell | 4.09e-08 | 61 |
electrically active cell | 4.09e-08 | 61 |
vein endothelial cell | 8.02e-08 | 6 |
aortic endothelial cell | 1.54e-07 | 6 |
lining cell | 1.82e-07 | 58 |
barrier cell | 1.82e-07 | 58 |
somatic stem cell | 8.68e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.69e-11 | 14 |