FFCP PHASE1:Hg19::chrX:122317787..122317805,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2892 | |EntrezGene=2892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4573 | |HGNC=4573 | ||
|TSSclassifier=strong | |||
|UniProt=Q4TT43 | |UniProt=Q4TT43 | ||
|association_with_transcript=-200bp_to_ENST00000371266_5end | |association_with_transcript=-200bp_to_ENST00000371266_5end | ||
|cluster_id=chrX:122317787..122317805,+ | |||
|description=CAGE_peak_8_at_GRIA3_5end | |description=CAGE_peak_8_at_GRIA3_5end | ||
|id=chrX:122317787..122317805,+ | |id=chrX:122317787..122317805,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.12e-07!23 | |ontology_enrichment_celltype=CL:0002620!3.12e-07!23 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.81e-36!57;UBERON:0005068!2.81e-36!57;UBERON:0006241!2.81e-36!57;UBERON:0007135!2.81e-36!57;UBERON:0001017!9.21e-33!82;UBERON:0002780!3.97e-32!41;UBERON:0001890!3.97e-32!41;UBERON:0006240!3.97e-32!41;UBERON:0005743!1.52e-31!86;UBERON:0003080!5.10e-31!42;UBERON:0002616!1.88e-30!59;UBERON:0000073!5.15e-30!94;UBERON:0001016!5.15e-30!94;UBERON:0002020!2.44e-28!34;UBERON:0003528!2.44e-28!34;UBERON:0001893!8.59e-28!34;UBERON:0000955!1.92e-27!69;UBERON:0006238!1.92e-27!69;UBERON:0002791!6.57e-27!33;UBERON:0001869!3.55e-26!32;UBERON:0003075!1.54e-23!86;UBERON:0007284!1.54e-23!86;UBERON:0002346!1.51e-22!90;UBERON:0007023!5.58e-22!115;UBERON:0002619!1.98e-21!22;UBERON:0003056!5.41e-20!61;UBERON:0000956!1.66e-19!25;UBERON:0000203!1.66e-19!25;UBERON:0001950!3.60e-19!20;UBERON:0000025!8.88e-16!194;UBERON:0000033!9.61e-14!123;UBERON:0004121!1.12e-13!169;UBERON:0000924!2.18e-13!173;UBERON:0006601!2.18e-13!173;UBERON:0000153!2.70e-12!129;UBERON:0007811!2.70e-12!129;UBERON:0000475!3.87e-12!365;UBERON:0002420!1.02e-10!9;UBERON:0007245!1.02e-10!9;UBERON:0010009!1.02e-10!9;UBERON:0010011!1.02e-10!9;UBERON:0000454!1.02e-10!9;UBERON:0002308!2.07e-10!9;UBERON:0000125!2.07e-10!9;UBERON:0004111!2.54e-10!241;UBERON:0009663!1.96e-08!7;UBERON:0000483!4.45e-08!309;UBERON:0000119!4.53e-08!312;UBERON:0000477!2.01e-07!286;UBERON:0000200!3.88e-07!6;UBERON:0000349!4.38e-07!5;UBERON:0001871!5.89e-07!7;UBERON:0003076!7.31e-07!15;UBERON:0003057!7.31e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.09e-27;32!UBERON:0003528;7.81e-27;34!UBERON:0002020;7.81e-27;34!UBERON:0002619;3.82e-25;22!UBERON:0001869;2.83e-24;32!UBERON:0001893;9.51e-24;34!UBERON:0000956;6.88e-22;25!UBERON:0000203;6.88e-22;25!UBERON:0002780;2.31e-20;41!UBERON:0001890;2.31e-20;41!UBERON:0001950;1.54e-19;20!UBERON:0002420;5.56e-15;9!UBERON:0007245;5.56e-15;9!UBERON:0010009;5.56e-15;9!UBERON:0010011;5.56e-15;9!UBERON:0000454;5.56e-15;9!UBERON:0000073;3.44e-13;53!UBERON:0002616;3.44e-13;53!UBERON:0000349;5.14e-13;5!UBERON:0001017;1.88e-12;75!UBERON:0000955;7.91e-11;68!UBERON:0000125;1.27e-10;9!UBERON:0002308;1.27e-10;9!UBERON:0001954;4.59e-09;2!UBERON:0003022;4.59e-09;2!UBERON:0002421;4.59e-09;2!UBERON:0002600;4.59e-09;2!UBERON:0001016;4.85e-09;83!UBERON:0001871;5.37e-09;6!UBERON:0009663;5.90e-09;7!UBERON:0001876;6.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.51e-31,34;UBERON:0002020,4.51e-31,34;UBERON:0001049,6.34e-30,56;UBERON:0005068,6.34e-30,56;UBERON:0006241,6.34e-30,56;UBERON:0007135,6.34e-30,56;UBERON:0002791,2.68e-29,32;UBERON:0002780,3.59e-28,41;UBERON:0001890,3.59e-28,41;UBERON:0003080,3.59e-28,41;UBERON:0006240,3.59e-28,41;UBERON:0001893,2.24e-27,34;UBERON:0001017,1.10e-26,81;UBERON:0000073,4.74e-26,53;UBERON:0002616,4.74e-26,53;UBERON:0001869,7.44e-26,32;UBERON:0002619,4.68e-25,22;UBERON:0001016,2.13e-23,89;UBERON:0000955,3.81e-23,68;UBERON:0006238,3.81e-23,68;UBERON:0000956,8.21e-22,25;UBERON:0000203,8.21e-22,25;UBERON:0001950,1.70e-19,20;UBERON:0003075,1.09e-18,82;UBERON:0007284,1.09e-18,82;UBERON:0002346,1.46e-17,86;UBERON:0003056,1.59e-17,61;UBERON:0007023,3.66e-16,114;UBERON:0002420,3.43e-15,9;UBERON:0007245,3.43e-15,9;UBERON:0010009,3.43e-15,9;UBERON:0010011,3.43e-15,9;UBERON:0000454,3.43e-15,9;UBERON:0010371,5.96e-15,104;UBERON:0000349,4.67e-13,5;UBERON:0010314,9.32e-12,132;UBERON:0011216,3.38e-11,223;UBERON:0004121,4.15e-11,171;UBERON:0000924,4.15e-11,171;UBERON:0006601,4.15e-11,171;UBERON:0000125,9.46e-11,9;UBERON:0002308,9.46e-11,9;UBERON:0000025,1.86e-10,192;UBERON:0009663,4.62e-09,7;UBERON:0001876,4.90e-09,2;UBERON:0001954,5.51e-09,2;UBERON:0003022,5.51e-09,2;UBERON:0002421,5.51e-09,2;UBERON:0002600,5.51e-09,2;UBERON:0001871,5.94e-09,6;UBERON:0004111,1.10e-07,240 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.427114777637135,0.635795703478686,0.300091096084402,1.03052529238439,0.515281080091258,0.930584281657949,0.506328996723799,0.389748020644795,1.00973509697646,0.920498986422993,0.484938170456436,0.355009592516614,0.503760491138201,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,2.94848165003288,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,1.01637849688985,0,0,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,0,0,0,1.60586089917446,0.946214490203608,0.234282829985426,1.20378439891088,0,1.03473071292505,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.256278298511402,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,1.30012049207304,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0.178064071293475,0.330569830721956,0.192190067365106,0,0.30347334256665,0.464845549297286,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.74129687641568,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,1.58510321173008,0,0,0.731140468893853,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0.608731130888112,0.6196469961995,0.563391205064483,0,0,0.35667105148125,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,1.31801321087491,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.53204949538923,0,0,0,0,0.276283915531148,0,1.73856760253663,0,0.311039587661807,0,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,3.54296554325536,0.964771509003264,0,0.331737779793674,0,0.438770794307945,0,0,0.307801034015188,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0.789168805698781,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,1.39283751102933,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.590564889088493,0,3.18091875923721,2.31545790389679,0,0.137539436597234,0.415440338029185,0,0,1.33649024647654,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,1.36310417428337,0,1.31897010310274,0,3.87848869084652,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.44052529803926,0.500763722825999,1.72022758707021,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,1.10961172300523,0.189403005275089,1.50940741051545,0.889811221596536,0.228840068396924,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,2.24901556081802,0,0.829412415681711,0.53168342911599,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,1.19428766609585,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.639471856518258,0.431299245586727,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0,0.899209151350433,1.41696576325585,0.478901577171454,2.46139637088906,0.756215088665154,0.829887029570615,2.09918339321406,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,0,0.810451015420736,2.34323429584154,0.826747186004736,1.26831620387814,0.546974809018219,0,0,0,0,1.60710550763486,0.672567444437648,0.606965604236632,0,0,0,0,0.611727596791485,0.855046056317038,0,0,0.078493092850514,1.57115589916002,0,1.82631744101899,0,0,0.500335809236594,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,3.14093547383912,2.37637120261669,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,1.43339583151451,0,1.08786384305464,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,3.31667775783512,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.427114777637135,0.635795703478686,0.300091096084402,1.03052529238439,0.515281080091258,0.930584281657949,0.506328996723799,0.389748020644795,1.00973509697646,0.920498986422993,0.484938170456436,0.355009592516614,0.503760491138201,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,2.94848165003288,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,1.01637849688985,0,0,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,0,0,0,1.60586089917446,0.946214490203608,0.234282829985426,1.20378439891088,0,1.03473071292505,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.256278298511402,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,1.30012049207304,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0.178064071293475,0.330569830721956,0.192190067365106,0,0.30347334256665,0.464845549297286,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.74129687641568,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,1.58510321173008,0,0,0.731140468893853,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0.608731130888112,0.6196469961995,0.563391205064483,0,0,0.35667105148125,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,1.31801321087491,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.53204949538923,0,0,0,0,0.276283915531148,0,1.73856760253663,0,0.311039587661807,0,0,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,3.54296554325536,0.964771509003264,0,0.331737779793674,0,0.438770794307945,0,0,0.307801034015188,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0.789168805698781,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,1.39283751102933,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.590564889088493,0,3.18091875923721,2.31545790389679,0,0.137539436597234,0.415440338029185,0,0,1.33649024647654,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,1.36310417428337,0,1.31897010310274,0,3.87848869084652,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.44052529803926,0.500763722825999,1.72022758707021,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,1.10961172300523,0.189403005275089,1.50940741051545,0.889811221596536,0.228840068396924,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,2.24901556081802,0,0.829412415681711,0.53168342911599,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,1.19428766609585,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.639471856518258,0.431299245586727,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0,0.899209151350433,1.41696576325585,0.478901577171454,2.46139637088906,0.756215088665154,0.829887029570615,2.09918339321406,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,0,0.810451015420736,2.34323429584154,0.826747186004736,1.26831620387814,0.546974809018219,0,0,0,0,1.60710550763486,0.672567444437648,0.606965604236632,0,0,0,0,0.611727596791485,0.855046056317038,0,0,0.078493092850514,1.57115589916002,0,1.82631744101899,0,0,0.500335809236594,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,3.14093547383912,2.37637120261669,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,1.43339583151451,0,1.08786384305464,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,3.31667775783512,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p8@GRIA3 | |short_description=p8@GRIA3 | ||
}} | }} |
Latest revision as of 07:12, 19 September 2015
Short description: | p8@GRIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -200bp_to_ENST00000371266_5end |
EntrezGene: | GRIA3 |
HGNC: | 4573 |
UniProt: | Q4TT43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data