FFCP PHASE1:Hg19::chr9:97766469..97766518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84909 | |EntrezGene=84909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1361 | |HGNC=1361 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU39 | |UniProt=B4DU39 | ||
|association_with_transcript=0bp_to_ENST00000433691_5end | |association_with_transcript=0bp_to_ENST00000433691_5end | ||
|cluster_id=chr9:97766469..97766518,+ | |||
|description=CAGE_peak_3_at_C9orf3_5end | |description=CAGE_peak_3_at_C9orf3_5end | ||
|id=chr9:97766469..97766518,+ | |id=chr9:97766469..97766518,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.10e-10!75;CL:0000055!3.29e-10!180;CL:0002076!1.99e-09!43;CL:0000220!1.90e-08!246;CL:0002321!3.67e-08!248;CL:0000066!1.01e-07!254 | |ontology_enrichment_celltype=CL:0000057!1.10e-10!75;CL:0000055!3.29e-10!180;CL:0002076!1.99e-09!43;CL:0000220!1.90e-08!246;CL:0002321!3.67e-08!248;CL:0000066!1.01e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.88e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.08e-11,76;CL:0002076,3.05e-09,42;CL:0002321,3.72e-08,250;CL:0000066,4.04e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.05e-16!347;UBERON:0000475!1.42e-15!365;UBERON:0004119!4.34e-15!169;UBERON:0000925!4.34e-15!169;UBERON:0006595!4.34e-15!169;UBERON:0001007!1.46e-13!155;UBERON:0001555!1.46e-13!155;UBERON:0007026!1.46e-13!155;UBERON:0003104!1.60e-13!238;UBERON:0009142!1.60e-13!238;UBERON:0000468!4.63e-13!659;UBERON:0000467!2.69e-11!625;UBERON:0002100!4.60e-11!216;UBERON:0000480!5.07e-11!626;UBERON:0003102!3.16e-10!95;UBERON:0000077!4.81e-10!130;UBERON:0000477!5.28e-10!286;UBERON:0000062!5.58e-10!511;UBERON:0004921!9.55e-10!129;UBERON:0004185!9.55e-10!129;UBERON:0004923!1.51e-09!57;UBERON:0000064!2.67e-09!219;UBERON:0001004!2.35e-07!72;UBERON:0004111!3.11e-07!241;UBERON:0000483!5.90e-07!309;UBERON:0000161!6.12e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.73e-15,160;UBERON:0000925,2.73e-15,160;UBERON:0006595,2.73e-15,160;UBERON:0001007,1.22e-13,145;UBERON:0001555,1.22e-13,145;UBERON:0007026,1.22e-13,145;UBERON:0003102,1.06e-10,99;UBERON:0004923,7.23e-10,66;UBERON:0004921,1.69e-09,118;UBERON:0002100,4.31e-09,199;UBERON:0001004,2.03e-07,74;UBERON:0000161,2.32e-07,36 | |||
|phase1_expression=6.54042165374004,5.56661362116556,6.06103937612676,10.007329835313,4.46961094427288,13.0850778615055,0,0.631719873426831,0.522371256399677,2.7030733015166,4.18680700783456,5.89791704751465,3.69273769519835,3.96052329472149,3.64537113300707,1.34465029290355,5.42425075221579,2.19093027116212,2.43966399395253,8.61847406537515,6.9360235023046,8.46327747990837,2.28988789704845,4.10623275218653,6.27713197974014,0.382067028739756,0.57470412614962,0.472264687882075,0,0,0.309632246632152,2.75826367343678,3.614471025339,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.768547918354051,0.390178042679635,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,3.83587685530591,6.86734389530676,9.5254203020819,8.83563765661025,9.54343136461319,11.6792368872633,8.88627281342238,5.98669373148923,6.85111328406383,8.12070268085818,2.91436230634034,4.44941331341315,1.29818957461873,0.870648686496336,1.06366368415092,0,0,0,2.78267370313387,0,1.73570250803797,1.69592382577203,2.09749718104953,1.6507082516404,0.626984899610432,4.90991842421725,2.84613010149368,3.68192674041137,1.61131726843659,3.80136052859256,3.1728067481262,4.41195696415042,1.62028389576352,3.57198913136319,3.36794058939255,3.15312145353302,0,2.84779697870439,0.366403487860815,0,0,8.28578699070815,4.47274756525787,8.61087479319142,19.1993312179167,22.0864197976587,8.86670955495893,7.28880880184999,3.20246987189115,7.4000264525148,6.22422070799533,2.42479209725439,3.26923806226917,3.17850598054356,0,1.40592859100278,1.24864030732128,0.570471821544449,0.298897361103602,1.17434498643765,2.5899671098901,1.12360645361799,4.08308342509786,2.45668634623536,2.6864703105699,2.37600571456411,7.66527480763526,2.73048408581408,2.87447256726495,3.36672227908132,2.00189631795143,2.49357703935765,7.46261955497424,11.0335606487647,7.06118876861005,2.26864366320042,16.862625754753,14.5219024396626,8.47727604638247,11.4034616512073,7.83199222212136,13.1396675423271,10.6086608109006,19.2405018755043,11.5950036141826,20.4471357137733,11.2300876343605,8.24394889775941,14.9104028856978,9.16844093871526,6.10418132317755,5.41130388857231,3.54569956768085,4.01526433544605,0.853815942907168,0.530119073285941,0.464775771478074,0.10366105501537,1.26160425437814,0.72995471815166,7.8224766164908,5.14592750554308,13.8134921352481,8.8229906326076,7.94067429836544,6.50687400219141,7.58631105351458,6.02527574708705,6.61763836394364,6.10062443458737,4.03360052488864,4.71909578560575,4.70931516300831,7.69494313892781,0.738155454624648,0,10.289350283285,11.7606969108434,2.53510069643662,4.91413608338813,1.77236972004421,0,5.04252598026766,2.40194934417936,1.31700342490351,2.24803506515239,1.40740561376283,4.35165692245089,0.325808305310325,2.07986957055916,2.88662684050547,2.08674728955138,4.57893907519705,1.15493158208859,1.85194205030644,1.52203321787679,1.58040879591855,4.29243081047436,0,0,0,4.68669169933885,5.87937448696008,4.82035330624114,1.88072897675981,1.74380363108377,1.53353071666084,0.492663237895943,0,0,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0.205654985406647,0,0,0.897048674762886,1.74384027533312,0.22001485746285,5.04159691455333,10.7296933755565,2.535908257668,9.83971031364021,9.36066932202295,2.57207374262142,0,1.8649552531127,5.00422977803516,4.34097284313154,1.64648067356154,1.30294473717494,3.55391948742546,2.37585561880029,8.13886318060882,9.58686804460323,7.19805536510811,0,0,0,4.55287225434007,8.04033550838797,9.98458335285029,5.50168965336801,6.98619496671304,9.49023105171447,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,2.57652132610194,0.500170521059677,0.813795071099207,8.94274704582471,5.70972764150918,6.30809660135739,7.37990914454093,7.22270639346525,6.82222512167955,1.03473071292505,1.32845119707087,5.53107505625109,3.90976265106373,1.76221041716467,1.37257369524342,0,0,0.106727557803444,6.06255142892519,4.99306318531491,2.11673205330776,7.44323423456331,22.5589100733452,9.5424432107245,5.12556597022804,7.16390148693385,4.50390979202101,7.42090332224955,1.07946785661859,2.84098760501003,1.64254312027618,1.55776328755086,2.09178681227927,3.50492403815704,5.21316822788541,7.18231713699991,4.59257792658427,3.64182336013434,4.58935452357984,1.80479845162965,1.00119938235739,4.70609861506113,2.92278449306521,1.89992932007176,0,2.04112446331819,2.15915916102139,0,3.79325012561394,4.01351819083883,1.52925763827023,2.49322802678617,2.91037181138832,0.657779629937804,0.784306353074702,1.28225062558195,3.28014645699706,0.650756789328606,5.564214628977,4.57847324091717,6.93079799332939,2.29706215198469,2.60024098414608,12.8547143875328,1.7400729292582,2.61882649094895,1.99554777143968,1.65403886981437,2.36324538710202,2.90033387828457,2.30111894023472,2.93805717634233,6.11554186835619,5.18913181885787,21.0560975616064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| ||
|short_description=p3@C9orf3 | |short_description=p3@C9orf3 | ||
}} | }} |
Latest revision as of 10:22, 18 September 2015
Short description: | p3@C9orf3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C9orf3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433691_5end |
EntrezGene: | C9orf3 |
HGNC: | 1361 |
UniProt: | B4DU39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.08e-11 | 76 |
endo-epithelial cell | 3.05e-09 | 42 |
embryonic cell | 3.72e-08 | 250 |
epithelial cell | 4.04e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.73e-15 | 160 |
endoderm | 2.73e-15 | 160 |
presumptive endoderm | 2.73e-15 | 160 |
digestive system | 1.22e-13 | 145 |
digestive tract | 1.22e-13 | 145 |
primitive gut | 1.22e-13 | 145 |
surface structure | 1.06e-10 | 99 |
organ component layer | 7.23e-10 | 66 |
subdivision of digestive tract | 1.69e-09 | 118 |
trunk | 4.31e-09 | 199 |
respiratory system | 2.03e-07 | 74 |
orifice | 2.32e-07 | 36 |