FFCP PHASE1:Hg19::chr9:93564254..93564264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6850 | |EntrezGene=6850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11491 | |HGNC=11491 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000476708_5end | |association_with_transcript=10bp_to_ENST00000476708_5end | ||
|cluster_id=chr9:93564254..93564264,+ | |||
|description=CAGE_peak_5_at_SYK_5end | |description=CAGE_peak_5_at_SYK_5end | ||
|id=chr9:93564254..93564264,+ | |id=chr9:93564254..93564264,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.29e-21!24;CL:0000826!4.29e-21!24;CL:0000236!1.53e-10!14;CL:0002076!2.23e-08!43;CL:0000542!2.40e-08!53;CL:0000051!2.40e-08!53;CL:0000838!9.77e-08!52;CL:0002368!9.39e-07!13 | |ontology_enrichment_celltype=CL:0000945!4.29e-21!24;CL:0000826!4.29e-21!24;CL:0000236!1.53e-10!14;CL:0002076!2.23e-08!43;CL:0000542!2.40e-08!53;CL:0000051!2.40e-08!53;CL:0000838!9.77e-08!52;CL:0002368!9.39e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.15e-13;3!CL:0000945;3.19e-13;24!CL:0000094;5.77e-11;8!CL:0002032;2.62e-10;1!CL:0002252;2.62e-10;1!CL:0000557;2.62e-10;1!CL:0000081;4.14e-08;11!CL:0000236;9.52e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.62e-13,24;CL:0000826,2.62e-13,24;CL:0000775,3.79e-13,3;CL:0000094,6.50e-11,8;CL:0002252,2.50e-10,1;CL:0000081,4.51e-08,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.13e-10;1!DOID:1357;1.13e-10;1!DOID:3151;2.62e-10;1!DOID:3149;2.62e-10;1!DOID:0060058;6.76e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.84e-11,1;DOID:1357,9.84e-11,1;DOID:3151,4.75e-10,1;DOID:3149,4.75e-10,1;DOID:0060058,6.50e-09,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.43e-20;2!UBERON:0005058;6.43e-20;2!UBERON:0009113;6.43e-20;2!UBERON:0001764;1.13e-10;1!UBERON:0001825;1.13e-10;1!UBERON:0002372;2.62e-10;1!UBERON:0001961;2.62e-10;1!UBERON:0001744;2.62e-10;1!UBERON:0001042;2.62e-10;1!UBERON:0001735;2.62e-10;1!UBERON:0004177;1.63e-08;5!UBERON:0005057;1.63e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.84e-11,1;UBERON:0001825,9.84e-11,1;UBERON:0002372,1.73e-10,1;UBERON:0001961,1.73e-10,1;UBERON:0001744,1.73e-10,1;UBERON:0001735,1.73e-10,1;UBERON:0002370,1.99e-10,4;UBERON:0005058,1.99e-10,4;UBERON:0009113,1.99e-10,4;UBERON:0003295,1.99e-10,4;UBERON:0005562,1.99e-10,4;UBERON:0001042,5.53e-09,10;UBERON:0009145,5.53e-09,10;UBERON:0006562,3.28e-08,11;UBERON:0003351,3.14e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.157421562627358,0,0,0,0.919421224478927,0.90361775633475,0,2.16908161624845,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,1.70692089026603,0.400395987036012,0.574752439954483,0,1.90810750907073,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0.26591592103773,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,3.74503511973591,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0.399158742865633,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.369254416383208,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.783939179315021,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0.160753148465019,0.137539436597234,0,0,0,0,1.0063040627978,0.157611414598396,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,1.38328142328561,4.38453354171225,1.27668251554036,0,0,0,0,2.98402782875445,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.353909170043221,0,0.577628330751691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.196300467230486,0,0,0,0,0,0.701818390386317,0.198950775161368,0,1.35535298446752,0,0.754814217833368,0.154348316215889,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0.178553938605658,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.36757959813938,0.250707539292375,0.227336094654718,0,0,0,0.852935927603924,0,4.77957932786445,3.1037357147929,0,0.381882949668989,0.606351566874658,0.435433495793923,0,1.6164492723501,0.502055437748735,0,0.162806537221949,0,0,0,0,0,0,0,1.00636896795513,0.641136984606466 | 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| ||
|short_description=p5@SYK | |short_description=p5@SYK | ||
}} | }} |
Latest revision as of 06:06, 18 September 2015
Short description: | p5@SYK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYK_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000476708_5end |
EntrezGene: | SYK |
HGNC: | 11491 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.62e-13 | 24 |
pro-B cell | 2.62e-13 | 24 |
neutrophil | 3.79e-13 | 3 |
granulocyte | 6.50e-11 | 8 |
epithelial cell of esophagus | 2.50e-10 | 1 |
blood cell | 4.51e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.84e-11 | 1 |
paranasal sinus | 9.84e-11 | 1 |
tonsil | 1.73e-10 | 1 |
mucosa-associated lymphoid tissue | 1.73e-10 | 1 |
lymphoid tissue | 1.73e-10 | 1 |
tonsillar ring | 1.73e-10 | 1 |
thymus | 1.99e-10 | 4 |
hemolymphoid system gland | 1.99e-10 | 4 |
thymic region | 1.99e-10 | 4 |
pharyngeal gland | 1.99e-10 | 4 |
thymus primordium | 1.99e-10 | 4 |
chordate pharynx | 5.53e-09 | 10 |
pharyngeal region of foregut | 5.53e-09 | 10 |
pharynx | 3.28e-08 | 11 |
pharyngeal epithelium | 3.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.84e-11 | 1 |
maxillary sinus cancer | 9.84e-11 | 1 |
skin squamous cell carcinoma | 4.75e-10 | 1 |
keratoacanthoma | 4.75e-10 | 1 |
lymphoma | 6.50e-09 | 10 |