FFCP PHASE1:Hg19::chr14:67878829..67878909,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:67878829..67878909,-
|short_description=p1@PLEK2
|description=CAGE_peak_1_at_PLEK2_5end
|association_with_transcript=0bp_to_ENST00000557388_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26499 | |EntrezGene=26499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19238 | |HGNC=19238 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557388_5end | |||
|cluster_id=chr14:67878829..67878909,- | |||
|coexpression_cluster_id=C1188 | |||
|description=CAGE_peak_1_at_PLEK2_5end | |||
|id=chr14:67878829..67878909,- | |||
|ontology_enrichment_celltype=CL:0000066!1.37e-27!254;CL:0000220!2.31e-14!246;CL:0002321!7.86e-14!248;CL:0002076!8.53e-13!43;CL:0000359!6.07e-11!32;CL:0000223!5.83e-10!59;CL:0000076!9.28e-10!62;CL:0000192!1.49e-09!42;CL:0000514!1.49e-09!42;CL:0000183!3.13e-09!59;CL:0000222!4.20e-09!119;CL:0000680!7.88e-09!57;CL:0000056!7.88e-09!57;CL:0000355!7.88e-09!57;CL:0000187!1.04e-08!54;CL:0002368!4.95e-07!13;CL:0002251!9.57e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.48e-11;42!CL:0000359;1.26e-10;32!CL:0002368;1.04e-07;13!CL:0002251;2.22e-07;20!CL:1000449;3.05e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.81e-26,253;CL:0002076,6.38e-14,42;CL:0002321,6.59e-13,250;CL:0000359,2.39e-11,32;CL:0000223,6.35e-11,58;CL:0000076,1.43e-09,63;CL:0000192,4.12e-09,43;CL:0000514,4.12e-09,43;CL:0000222,2.13e-08,121;CL:0000680,5.53e-08,58;CL:0000056,5.53e-08,58;CL:0000355,5.53e-08,58;CL:0000187,7.92e-08,55;CL:0002368,1.11e-07,13;CL:0002251,2.22e-07,20;CL:1000449,2.87e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.55e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.32e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.78e-21!238;UBERON:0009142!1.78e-21!238;UBERON:0000926!2.75e-20!448;UBERON:0004120!2.75e-20!448;UBERON:0006603!2.75e-20!448;UBERON:0004119!2.89e-18!169;UBERON:0000925!2.89e-18!169;UBERON:0006595!2.89e-18!169;UBERON:0000468!1.09e-17!659;UBERON:0000467!1.77e-16!625;UBERON:0002100!3.19e-16!216;UBERON:0000480!3.46e-16!626;UBERON:0002050!4.10e-16!605;UBERON:0005423!4.10e-16!605;UBERON:0000923!4.89e-16!604;UBERON:0005291!4.89e-16!604;UBERON:0006598!4.89e-16!604;UBERON:0002532!4.89e-16!604;UBERON:0003914!7.39e-16!118;UBERON:0000922!1.10e-15!612;UBERON:0000481!2.37e-15!347;UBERON:0005256!4.13e-15!143;UBERON:0000490!8.19e-15!138;UBERON:0001007!5.66e-14!155;UBERON:0001555!5.66e-14!155;UBERON:0007026!5.66e-14!155;UBERON:0001637!3.92e-12!42;UBERON:0003509!3.92e-12!42;UBERON:0004572!3.92e-12!42;UBERON:0000119!5.83e-12!312;UBERON:0000483!2.11e-11!309;UBERON:0000486!2.41e-11!82;UBERON:0004921!5.01e-11!129;UBERON:0004185!5.01e-11!129;UBERON:0001981!6.98e-11!60;UBERON:0007500!6.98e-11!60;UBERON:0004537!6.98e-11!60;UBERON:0006965!6.98e-11!60;UBERON:0004872!2.12e-10!84;UBERON:0001048!2.30e-10!168;UBERON:0000077!3.86e-10!130;UBERON:0004535!4.03e-10!110;UBERON:0000466!9.65e-10!126;UBERON:0005911!2.82e-09!82;UBERON:0001009!2.82e-09!113;UBERON:0002049!3.73e-09!79;UBERON:0007798!3.73e-09!79;UBERON:0000055!4.27e-09!69;UBERON:0000464!4.29e-09!104;UBERON:0004290!8.06e-09!70;UBERON:0004573!8.83e-09!33;UBERON:0004571!8.83e-09!33;UBERON:0000914!1.37e-08!83;UBERON:0002329!1.37e-08!83;UBERON:0003077!1.37e-08!83;UBERON:0003059!1.37e-08!83;UBERON:0007282!1.37e-08!83;UBERON:0009618!1.37e-08!83;UBERON:0007285!1.37e-08!83;UBERON:0001041!6.62e-08!98;UBERON:0000475!9.39e-08!365;UBERON:0002385!1.28e-07!63;UBERON:0001015!1.28e-07!63;UBERON:0000383!1.28e-07!63;UBERON:0001134!1.62e-07!61;UBERON:0002036!1.62e-07!61;UBERON:0003082!1.62e-07!61;UBERON:0001004!3.22e-07!72;UBERON:0000477!9.80e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.65e-09;42!UBERON:0003509;2.65e-09;42!UBERON:0004572;2.65e-09;42!UBERON:0004573;2.93e-08;33!UBERON:0004571;2.93e-08;33!UBERON:0003914;8.96e-08;74!UBERON:0007500;2.53e-07;56!UBERON:0001981;2.53e-07;56!UBERON:0004537;2.53e-07;56!UBERON:0006555;3.05e-07;15!UBERON:0004819;3.05e-07;15!UBERON:0001285;3.05e-07;15!UBERON:0007684;3.05e-07;15!UBERON:0000025;4.39e-07;93 | |||
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| ||
|short_description=p1@PLEK2 | |||
}} | }} |
Latest revision as of 04:46, 25 September 2015
Short description: | p1@PLEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEK2_5end |
Coexpression cluster: | C1188_Urothelial_Gingival_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Prostate |
Association with transcript: | 0bp_to_ENST00000557388_5end |
EntrezGene: | PLEK2 |
HGNC: | 19238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.81e-26 | 253 |
endo-epithelial cell | 6.38e-14 | 42 |
embryonic cell | 6.59e-13 | 250 |
vascular associated smooth muscle cell | 2.39e-11 | 32 |
endodermal cell | 6.35e-11 | 58 |
squamous epithelial cell | 1.43e-09 | 63 |
smooth muscle cell | 4.12e-09 | 43 |
smooth muscle myoblast | 4.12e-09 | 43 |
mesodermal cell | 2.13e-08 | 121 |
muscle precursor cell | 5.53e-08 | 58 |
myoblast | 5.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.53e-08 | 58 |
muscle cell | 7.92e-08 | 55 |
respiratory epithelial cell | 1.11e-07 | 13 |
epithelial cell of alimentary canal | 2.22e-07 | 20 |
epithelial cell of nephron | 2.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.32e-07 | 106 |