FFCP PHASE1:Hg19::chr2:46605165..46605191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:46605165..46605191,+ | |||
|coexpression_cluster_id=C2700 | |||
|description=CAGE_peak_at_chr2:46605165..46605191,+ | |description=CAGE_peak_at_chr2:46605165..46605191,+ | ||
|id=chr2:46605165..46605191,+ | |id=chr2:46605165..46605191,+ | ||
|ontology_enrichment_celltype=CL:0000213!1.53e-08!57;CL:0000215!1.53e-08!57;CL:0000115!1.63e-08!35;CL:0002139!1.94e-07!24;CL:0000222!3.51e-07!119;CL:0002078!3.88e-07!44 | |ontology_enrichment_celltype=CL:0000213!1.53e-08!57;CL:0000215!1.53e-08!57;CL:0000115!1.63e-08!35;CL:0002139!1.94e-07!24;CL:0000222!3.51e-07!119;CL:0002078!3.88e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.48e-08;24!CL:0000115;3.75e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.48e-08,36;CL:0002139,7.75e-08,24;CL:0002078,1.35e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.83e-14!659;UBERON:0000467!2.32e-13!625;UBERON:0000480!3.65e-13!626;UBERON:0000477!8.74e-13!286;UBERON:0000483!4.37e-12!309;UBERON:0000119!7.84e-12!312;UBERON:0004111!6.77e-11!241;UBERON:0000475!1.48e-09!365;UBERON:0007023!1.35e-08!115;UBERON:0002050!1.60e-08!605;UBERON:0005423!1.60e-08!605;UBERON:0000923!2.61e-08!604;UBERON:0005291!2.61e-08!604;UBERON:0006598!2.61e-08!604;UBERON:0002532!2.61e-08!604;UBERON:0000481!3.11e-08!347;UBERON:0000922!3.26e-08!612;UBERON:0000490!5.05e-08!138;UBERON:0004119!1.36e-07!169;UBERON:0000925!1.36e-07!169;UBERON:0006595!1.36e-07!169;UBERON:0003914!1.85e-07!118;UBERON:0000062!2.07e-07!511;UBERON:0000025!5.59e-07!194;UBERON:0002049!7.42e-07!79;UBERON:0007798!7.42e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.14e-07;7!UBERON:0004457;2.90e-07;9!UBERON:0000042;2.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,6.89e-09,66;UBERON:0003124,7.09e-08,7;UBERON:0005631,1.46e-07,14;UBERON:0000158,1.46e-07,14;UBERON:0003513,1.85e-07,7;UBERON:0000055,5.10e-07,68 | |||
|phase1_expression=0.54503513781167,2.99740733447376,1.26858963686374,1.0007329835313,3.12872766099101,2.61701557230111,2.53299878168311,1.89515962028049,1.30592814099919,0.245733936501509,0.697801167972428,0.655324116390517,1.58260186937072,0.495065411840187,0.662794751455832,0.672325146451775,0,0.730310090387373,1.46379839637152,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,2.1686349143074,0.50133791063589,3.0417768981773,0,0.486634870302636,0.378139268656271,0.443458794925128,0.790513071238134,1.44076983047484,0,1.85392221392215,0,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,3.77549492588915,4.12677062910101,1.46296476575767,2.06733407335463,0.71153252537342,1.33888245105868,2.41697590265488,1.52054421143703,6.10155143870424,0.735326160691737,4.86085168729056,0.982297011124877,0.673588117878509,0.450445921933289,0,0,0.732806975721629,0,0,0,0.496971951695318,0.633152558322899,0.397227542439656,0.286836620748814,0.709336764396714,0.560677600142307,0,1.2333377420858,0.311211035399766,2.42479209725439,1.14423332179421,0.302714855289863,0,0.234321431833797,2.18512053781224,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.491337269247072,0.206651562351531,4.75201142912821,9.39614331258516,0,0,0,0.250237039743928,0,0,1.83892677479412,3.15499923703853,0.226864366320042,1.07633781413317,1.49490172172997,0.423863802319124,0.300091096084402,0.412210116953756,0,0.558350568994769,0,0.779496041289589,0.757301322732344,0.736399189138395,0.161646056818812,0.355009592516614,0.403008392910561,0.508681776931463,0.193260853163297,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0.354920400119532,0.842923450390509,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,1.53898862778556,2.21446636387394,2.80483547606892,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0.491953754172454,1.54411029268673,0.98775256867763,0,0.301586917234893,0.833296006426766,1.3032332212413,0,1.44331342025273,0.115930404975077,0.234817388471643,1.29929802984966,1.85194205030644,2.28304982681518,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.626909658919938,0.581267877027924,0.383382679165211,0,0.264145302039678,0.207328115540772,0,0.12624243342638,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,2.12750493267896,0,0,0,0,1.71573592389777,0,0,0.325736184293735,1.06617584622764,0,0.602878754119172,0,0.699810938274399,0,0.502257091432126,0,0.479249710983165,3.44585807502342,0,0.723906533337896,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,2.49565033836969,5.88815663030634,2.52323864054295,0.702848489956279,0,0,0,0,0.184369168541703,1.04260337361699,0,0.343143423810856,0,0,0,0,1.66435439510497,2.41912234663744,0.496215615637554,0,1.96462066103151,0.640695746278505,1.02341449813341,1.93024705372329,0,0.771048469013278,0.532685175939381,0.657017248110473,0,0.232420756919918,0.483437798366489,1.40354529212299,0.920809889358963,0.34444334449382,2.73136752010076,4.85160335349869,0,0.15403067420883,0,1.46139224653261,0.105551628892876,0,2.04112446331819,0.863663664408557,3.08454505380579,0,0,0,0,0.671624264166535,0,0,0,0,1.30151357865721,2.47298427954533,0,0.082509499920588,0,1.95018073810956,0,0.290012154876366,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,1.4875642382488,1.15314040419064,0.127612712494584,1.71968227454435,1.85938219718914,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0.632758849437452,1.90630193923825,0.767693373934002,0,0,0,0.179872457583315,0.823611089208164,0.824686816419805,0,1.58510321173008,0,0.48763373908959,0,3.16950440270266,1.09199929126389,2.2624869112594,0,1.10273068709225,1.32687795048244,2.19225442626881,1.15755106853338,0,0,0,0,0,0.196498082026242,0.35667105148125,0,2.53329162357197,2.63435914367922,0.379473173765715,0,0.288666338176536,0.670302275535787,0,4.9896214411693,0.43050537267123,1.68471475667626,0,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,4.10222901961303,0,0,0.568272293612826,0.23874448473769,2.07875276582847,0.307160702099232,0,0.281338832821026,0.779160935160341,0.494411622680279,0.211125408127993,2.19172787076177,0.276283915531148,1.0077309914171,0.102268682502155,0,0,0.0898683511473268,1.25314822272926,0,1.28236427328014,0,0,2.90799823828566,1.20598527610407,0,0,0,0.724999575434793,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| ||
|short_description=p@chr2:46605165..46605191,+ | |short_description=p@chr2:46605165..46605191,+ | ||
}} | }} |
Latest revision as of 10:28, 29 July 2015
Short description: | p@chr2:46605165..46605191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46605165..46605191, + |
Coexpression cluster: | C2700_chorionic_lung_Fibroblast_Olfactory_Renal_Endothelial_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.48e-08 | 36 |
endothelial cell of vascular tree | 7.75e-08 | 24 |
meso-epithelial cell | 1.35e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 6.89e-09 | 66 |
chorion | 7.09e-08 | 7 |
extraembryonic membrane | 1.46e-07 | 14 |
membranous layer | 1.46e-07 | 14 |
trunk blood vessel | 1.85e-07 | 7 |
vessel | 5.10e-07 | 68 |