FFCP PHASE1:Hg19::chr14:53162215..53162261,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:53162215..53162261,-
|short_description=p3@ERO1L
|description=CAGE_peak_3_at_ERO1L_5end
|association_with_transcript=0bp_to_ENST00000554251,ENST0000055622...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30001 | |EntrezGene=30001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13280 | |HGNC=13280 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5B3,G3V503 | |UniProt=G3V5B3,G3V503 | ||
|association_with_transcript=0bp_to_ENST00000554251,ENST00000556223_5end | |||
|cluster_id=chr14:53162215..53162261,- | |||
|coexpression_cluster_id=C3431 | |||
|description=CAGE_peak_3_at_ERO1L_5end | |||
|id=chr14:53162215..53162261,- | |||
|ontology_enrichment_celltype=CL:0002076!1.02e-09!43;CL:0000223!1.07e-09!59;CL:0000359!4.90e-08!32;CL:0000066!3.71e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.69e-08;42!CL:0000359;1.09e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.52e-10,42;CL:0000223,6.67e-10,58;CL:0000359,4.02e-08,32;CL:0000066,4.04e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.46e-07!14;DOID:120!1.58e-07!27;DOID:193!5.27e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.39e-07;14!DOID:120;2.04e-07;27!DOID:193;8.27e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.21e-07,14;DOID:120,2.03e-07,27;DOID:193,6.68e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.62e-14!169;UBERON:0000925!4.62e-14!169;UBERON:0006595!4.62e-14!169;UBERON:0001007!4.83e-11!155;UBERON:0001555!4.83e-11!155;UBERON:0007026!4.83e-11!155;UBERON:0000926!2.95e-10!448;UBERON:0004120!2.95e-10!448;UBERON:0006603!2.95e-10!448;UBERON:0004921!1.16e-09!129;UBERON:0004185!1.16e-09!129;UBERON:0003104!5.53e-09!238;UBERON:0009142!5.53e-09!238;UBERON:0000077!1.25e-08!130;UBERON:0005911!1.41e-08!82;UBERON:0001004!2.14e-08!72;UBERON:0000161!4.93e-08!35;UBERON:0003100!1.54e-07!41;UBERON:0002100!5.64e-07!216;UBERON:0003102!8.92e-07!95;UBERON:0003929!9.13e-07!54 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.66e-15,160;UBERON:0000925,1.66e-15,160;UBERON:0006595,1.66e-15,160;UBERON:0001007,1.62e-12,145;UBERON:0001555,1.62e-12,145;UBERON:0007026,1.62e-12,145;UBERON:0004921,1.61e-11,118;UBERON:0005911,7.53e-09,82;UBERON:0001004,5.43e-08,74;UBERON:0001041,6.14e-08,87;UBERON:0002100,7.61e-08,199;UBERON:0003102,8.78e-08,99;UBERON:0000161,1.07e-07,36;UBERON:0003100,2.22e-07,41;UBERON:0003929,5.35e-07,54 | |||
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| ||
|short_description=p3@ERO1L | |||
}} | }} |
Latest revision as of 06:50, 20 September 2015
Short description: | p3@ERO1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ERO1L_5end |
Coexpression cluster: | C3431_Small_Smooth_Prostate_esophagus_Urothelial_Gingival_renal |
Association with transcript: | 0bp_to_ENST00000554251, ENST00000556223_5end |
EntrezGene: | ERO1L |
HGNC: | 13280 |
UniProt: | G3V5B3G3V503 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.52e-10 | 42 |
endodermal cell | 6.67e-10 | 58 |
vascular associated smooth muscle cell | 4.02e-08 | 32 |
epithelial cell | 4.04e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.66e-15 | 160 |
endoderm | 1.66e-15 | 160 |
presumptive endoderm | 1.66e-15 | 160 |
digestive system | 1.62e-12 | 145 |
digestive tract | 1.62e-12 | 145 |
primitive gut | 1.62e-12 | 145 |
subdivision of digestive tract | 1.61e-11 | 118 |
endo-epithelium | 7.53e-09 | 82 |
respiratory system | 5.43e-08 | 74 |
foregut | 6.14e-08 | 87 |
trunk | 7.61e-08 | 199 |
surface structure | 8.78e-08 | 99 |
orifice | 1.07e-07 | 36 |
female organism | 2.22e-07 | 41 |
gut epithelium | 5.35e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.21e-07 | 14 |
female reproductive organ cancer | 2.03e-07 | 27 |
reproductive organ cancer | 6.68e-07 | 29 |