FFCP PHASE1:Hg19::chr9:130517507..130517518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |EntrezGene=10044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |HGNC=16884 | ||
|TSSclassifier=strong | |||
|UniProt=E9PG48,A8K5S8 | |UniProt=E9PG48,A8K5S8 | ||
|association_with_transcript=42bp_to_ENST00000373274,NM_001142534,uc010mxo.2_5end | |association_with_transcript=42bp_to_ENST00000373274,NM_001142534,uc010mxo.2_5end | ||
|cluster_id=chr9:130517507..130517518,- | |||
|description=CAGE_peak_13_at_SH2D3C_5end | |description=CAGE_peak_13_at_SH2D3C_5end | ||
|id=chr9:130517507..130517518,- | |id=chr9:130517507..130517518,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.57e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.25e-16;3!UBERON:0006601;1.66e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.44e-13;1!DOID:4549;7.44e-13;1!DOID:5861;7.44e-13;1!DOID:6496;7.44e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-13,1;DOID:4549,7.03e-13,1;DOID:5861,7.03e-13,1;DOID:6496,7.03e-13,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.87e-33,20;UBERON:0001869,6.84e-32,32;UBERON:0001893,5.30e-30,34;UBERON:0002619,8.02e-30,22;UBERON:0001016,1.19e-28,89;UBERON:0001017,5.75e-28,81;UBERON:0000073,1.11e-27,53;UBERON:0002616,1.11e-27,53;UBERON:0000956,2.70e-26,25;UBERON:0000203,2.70e-26,25;UBERON:0001049,3.83e-26,56;UBERON:0005068,3.83e-26,56;UBERON:0006241,3.83e-26,56;UBERON:0007135,3.83e-26,56;UBERON:0002791,7.05e-26,32;UBERON:0000955,8.39e-25,68;UBERON:0006238,8.39e-25,68;UBERON:0002780,8.39e-25,41;UBERON:0001890,8.39e-25,41;UBERON:0003080,8.39e-25,41;UBERON:0006240,8.39e-25,41;UBERON:0003528,2.42e-24,34;UBERON:0002020,2.42e-24,34;UBERON:0003075,1.89e-17,82;UBERON:0007284,1.89e-17,82;UBERON:0000200,4.37e-17,6;UBERON:0002346,1.43e-16,86;UBERON:0003056,2.13e-16,61;UBERON:0001870,7.27e-16,3;UBERON:0007023,1.53e-14,114;UBERON:0004121,3.67e-14,171;UBERON:0000924,3.67e-14,171;UBERON:0006601,3.67e-14,171;UBERON:0010371,1.91e-13,104;UBERON:0002902,1.25e-12,1;UBERON:0009899,1.25e-12,1;UBERON:0002581,1.57e-12,1;UBERON:0002022,2.75e-12,1;UBERON:0007190,3.85e-12,1;UBERON:0001882,4.81e-12,1;UBERON:0005403,4.81e-12,1;UBERON:0011216,2.46e-10,223;UBERON:0010314,2.96e-10,132;UBERON:0001872,8.13e-10,5;UBERON:0000349,1.44e-09,5;UBERON:0002037,1.87e-08,6;UBERON:0006215,1.87e-08,6;UBERON:0001871,3.35e-07,6;UBERON:0002702,8.06e-07,2 | |||
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| ||
|short_description=p13@SH2D3C | |short_description=p13@SH2D3C | ||
}} | }} |
Latest revision as of 05:03, 25 September 2015
Short description: | p13@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SH2D3C_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000373274, NM_001142534, uc010mxo.2_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | E9PG48A8K5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-13 | 1 |
extraosseous chondrosarcoma | 7.03e-13 | 1 |
myxoid chondrosarcoma | 7.03e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-13 | 1 |