FFCP PHASE1:Hg19::chr2:26257462..26257473,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10890 | |EntrezGene=10890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9759 | |HGNC=9759 | ||
|TSSclassifier=strong | |||
|UniProt=P61026 | |UniProt=P61026 | ||
|association_with_transcript=483bp_to_ENST00000264710_5end | |association_with_transcript=483bp_to_ENST00000264710_5end | ||
|cluster_id=chr2:26257462..26257473,+ | |||
|description=CAGE_peak_9_at_RAB10_5end | |description=CAGE_peak_9_at_RAB10_5end | ||
|id=chr2:26257462..26257473,+ | |id=chr2:26257462..26257473,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.05e-14!42;CL:0000860!1.00e-13!45;CL:0002009!6.95e-12!65;CL:0002194!4.52e-11!63;CL:0000576!4.52e-11!63;CL:0000040!4.52e-11!63;CL:0000559!4.52e-11!63;CL:0000839!5.13e-11!70;CL:0000557!1.75e-10!71;CL:0000766!1.10e-09!76;CL:0000763!2.10e-09!112;CL:0000049!2.10e-09!112 | |ontology_enrichment_celltype=CL:0002057!5.05e-14!42;CL:0000860!1.00e-13!45;CL:0002009!6.95e-12!65;CL:0002194!4.52e-11!63;CL:0000576!4.52e-11!63;CL:0000040!4.52e-11!63;CL:0000559!4.52e-11!63;CL:0000839!5.13e-11!70;CL:0000557!1.75e-10!71;CL:0000766!1.10e-09!76;CL:0000763!2.10e-09!112;CL:0000049!2.10e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.00e-13;33!CL:0002057;3.00e-13;33!CL:0002540;9.42e-13;6!CL:0000214;3.59e-11;3!CL:0000473;2.07e-08;39!CL:0000234;2.07e-08;39!CL:0000153;2.43e-08;9!CL:0000447;2.43e-08;9!CL:0002092;7.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,9.10e-13,6;CL:0000214,3.25e-11,3;CL:0000860,1.24e-10,42;CL:0002057,1.24e-10,42;CL:0000473,3.59e-09,48;CL:0000234,3.59e-09,48;CL:0000153,2.38e-08,9;CL:0000447,2.38e-08,9;CL:0002092,7.57e-08,10;CL:0002194,4.01e-07,59;CL:0000576,4.01e-07,59;CL:0000040,4.01e-07,59;CL:0000559,4.01e-07,59;CL:0002009,7.37e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.88e-14!102;UBERON:0003061!8.88e-14!102;UBERON:0002193!3.63e-12!112;UBERON:0002371!1.21e-10!80;UBERON:0004765!6.36e-10!101;UBERON:0001434!6.36e-10!101;UBERON:0001474!4.32e-09!86;UBERON:0002405!5.40e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.59e-11;3!UBERON:0007616;3.59e-11;3!UBERON:0002217;3.59e-11;3!UBERON:0002018;3.59e-11;3!UBERON:0004457;3.29e-08;9!UBERON:0000042;3.29e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.25e-11,3;UBERON:0007616,3.25e-11,3;UBERON:0002217,3.25e-11,3;UBERON:0002018,3.25e-11,3;UBERON:0002390,7.05e-11,98;UBERON:0003061,7.05e-11,98;UBERON:0001434,1.24e-10,100;UBERON:0002371,2.39e-10,76;UBERON:0002193,1.15e-09,108;UBERON:0001474,1.83e-09,82;UBERON:0004765,1.81e-08,90;UBERON:0002405,3.86e-08,93 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.572471974262113,0,0.251085279189606,0.152826811495903,0.164201178899891,0,0,0.767658796194425,0.464448369948228,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.401088894940283,0.651032612147555,0.223915474239924,0,0.257575567634187,0.290796477559129,0.755751887377619,0,0.929716147622738,0.822335776043652,0.929119112685311,1.7261543539329,1.0246428261164,0.47296445977717,0.344745680736619,0,0,1.69418105588344,1.09162460023138,1.34834090667051,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,1.13477044938228,2.4912889959823,0.251248665256743,0,0.65156653411535,1.81619850790011,0.368277635987565,0.632924774881769,0.211255286311942,0.425208599930087,0.419317291016752,0.112328631146495,0,0.48217676009124,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,2.1686349143074,0.50133791063589,0.724232594804119,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0.870648686496336,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0.484938170456436,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.441175890929576,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.716243852959582,0.112085143993527,0,0,0,0.508189248444927,0,0,0,1.27587750330633,0.749007023947182,0,0,0.24538298343828,0,0,0,0.178428988797162,0.315404830067869,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,1.02341449813341,0,0,0.154209693802656,0.177561725313127,0.492762936082855,0,0.464841513839837,0.362578348774867,0.200506470303285,0.276242966807689,0,0.364182336013434,0.393373244878272,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0.495854746082934,0.192190067365106,0,0.2023155617111,0.464845549297286,0.31481234683064,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,1.47775344708365,1.31717957183961,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,0,0.213648142254946,0,0,0.371606350251437,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.338583555603207,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0.260427761085233,0.262379999988587,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.123563938946503,0.104421949505455,0,0.802577647298789,0.468528891450678,0,0,0,0.789168805698781,0,0,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0,0,0,0.19351266257817,0.146178634172371,0,0.872901148395775,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0.164831716762333,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0.643012593860077,0,0,0.224973891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| ||
|short_description=p9@RAB10 | |short_description=p9@RAB10 | ||
}} | }} |
Latest revision as of 14:37, 16 September 2015
Short description: | p9@RAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RAB10_5end |
Coexpression cluster: | NA |
Association with transcript: | 483bp_to_ENST00000264710_5end |
EntrezGene: | RAB10 |
HGNC: | 9759 |
UniProt: | P61026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 9.10e-13 | 6 |
synovial cell | 3.25e-11 | 3 |
classical monocyte | 1.24e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-10 | 42 |
defensive cell | 3.59e-09 | 48 |
phagocyte | 3.59e-09 | 48 |
GAG secreting cell | 2.38e-08 | 9 |
carbohydrate secreting cell | 2.38e-08 | 9 |
bone marrow cell | 7.57e-08 | 10 |
monopoietic cell | 4.01e-07 | 59 |
monocyte | 4.01e-07 | 59 |
monoblast | 4.01e-07 | 59 |
promonocyte | 4.01e-07 | 59 |
macrophage dendritic cell progenitor | 7.37e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.25e-11 | 3 |
layer of synovial tissue | 3.25e-11 | 3 |
synovial joint | 3.25e-11 | 3 |
synovial membrane of synovial joint | 3.25e-11 | 3 |
hematopoietic system | 7.05e-11 | 98 |
blood island | 7.05e-11 | 98 |
skeletal system | 1.24e-10 | 100 |
bone marrow | 2.39e-10 | 76 |
hemolymphoid system | 1.15e-09 | 108 |
bone element | 1.83e-09 | 82 |
skeletal element | 1.81e-08 | 90 |
immune system | 3.86e-08 | 93 |