FFCP PHASE1:Hg19::chr14:52158329..52158333,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52158329..52158333,+
|short_description=p@chr14:52158329..52158333,+
|description=CAGE_peak_at_chr14:52158329..52158333,+
|association_with_transcript=NA
...") |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:52158329..52158333,+ | |||
|description=CAGE_peak_at_chr14:52158329..52158333,+ | |||
|id=chr14:52158329..52158333,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.23e-11;23!CL:0002568;3.93e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.16e-11,23;CL:0002568,4.18e-07,1;CL:0000511,6.60e-07,1;CL:0002625,6.60e-07,1;CL:0000216,6.60e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.93e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.55e-18;5!DOID:450;7.55e-18;5!DOID:66;7.55e-18;5!DOID:423;7.55e-18;5!DOID:0080000;7.55e-18;5!DOID:11722;7.55e-18;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.38e-18,5;DOID:450,5.38e-18,5;DOID:66,5.38e-18,5;DOID:423,5.38e-18,5;DOID:0080000,5.38e-18,5;DOID:11722,5.38e-18,5;DOID:3571,9.25e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.90e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.51e-07,41;UBERON:0001136,6.60e-07,1;UBERON:0001343,6.60e-07,1;UBERON:0004910,6.60e-07,1;UBERON:0005154,6.60e-07,1;UBERON:0005295,6.60e-07,1;UBERON:0004813,6.60e-07,1;UBERON:0005297,6.60e-07,1;UBERON:0005294,6.60e-07,1;UBERON:0010141,6.60e-07,1;UBERON:0005891,6.60e-07,1 | |||
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| ||
|short_description=p@chr14:52158329..52158333,+ | |||
}} | }} |
Latest revision as of 21:01, 24 July 2015
Short description: | p@chr14:52158329..52158333, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:52158329..52158333, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.16e-11 | 23 |
mesenchymal stem cell of Wharton's jelly | 4.18e-07 | 1 |
androgen binding protein secreting cell | 6.60e-07 | 1 |
seminiferous tubule epithelial cell | 6.60e-07 | 1 |
Sertoli cell | 6.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.51e-07 | 41 |
mesothelium | 6.60e-07 | 1 |
seminiferous tubule of testis | 6.60e-07 | 1 |
epithelium of male gonad | 6.60e-07 | 1 |
epithelial cord | 6.60e-07 | 1 |
sex cord | 6.60e-07 | 1 |
seminiferous tubule epithelium | 6.60e-07 | 1 |
testis sex cord | 6.60e-07 | 1 |
genital ridge | 6.60e-07 | 1 |
primitive sex cord of indifferent gonad | 6.60e-07 | 1 |
coelomic epithelium | 6.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.38e-18 | 5 |
myotonic disease | 5.38e-18 | 5 |
muscle tissue disease | 5.38e-18 | 5 |
myopathy | 5.38e-18 | 5 |
muscular disease | 5.38e-18 | 5 |
myotonic dystrophy | 5.38e-18 | 5 |
liver cancer | 9.25e-07 | 1 |