FFCP PHASE1:Hg19::chr9:123165508..123165509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55755 | |EntrezGene=55755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |HGNC=18672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=430bp_to_ENST00000484546_5end | |association_with_transcript=430bp_to_ENST00000484546_5end | ||
|cluster_id=chr9:123165508..123165509,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_20_at_CDK5RAP2_5end | |description=CAGE_peak_20_at_CDK5RAP2_5end | ||
|id=chr9:123165508..123165509,- | |id=chr9:123165508..123165509,- | ||
|ontology_enrichment_celltype=CL:0002564!1.24e-12!3 | |ontology_enrichment_celltype=CL:0002564!1.24e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.15e-26;1!CL:0000159;6.43e-14;2!CL:0002363;1.07e-13;2!CL:0002575;1.07e-13;2!CL:0002564;1.41e-09;3!CL:0000669;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.16e-26,1;CL:0000159,6.43e-14,2;CL:0002575,8.28e-14,2;CL:0002363,1.21e-13,2;CL:0000008,1.21e-13,2;CL:0002564,1.81e-09,3;CL:0000669,1.49e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000008;1.07e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.15e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002242!1.24e-12!3;UBERON:0003068!1.24e-12!3;UBERON:0002328!1.24e-12!3;UBERON:0004880!1.24e-12!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.92e-26;1!UBERON:0003566;1.07e-13;2!UBERON:0001777;1.07e-13;2!UBERON:0002242;1.41e-09;3!UBERON:0004765;2.99e-09;26!UBERON:0002371;3.13e-09;12!UBERON:0003891;1.69e-07;4!UBERON:0000964;1.69e-07;4!UBERON:0010409;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.93e-26,1;UBERON:0003566,1.21e-13,2;UBERON:0001777,1.21e-13,2;UBERON:0002242,1.81e-09,3;UBERON:0003068,1.81e-09,3;UBERON:0002328,1.81e-09,3;UBERON:0004880,1.81e-09,3;UBERON:0003891,1.80e-07,4;UBERON:0000964,1.80e-07,4;UBERON:0010409,1.80e-07,4;UBERON:0004348,1.80e-07,4;UBERON:0005427,1.80e-07,4 | |||
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| ||
|short_description=p20@CDK5RAP2 | |short_description=p20@CDK5RAP2 | ||
}} | }} |
Latest revision as of 19:12, 24 September 2015
Short description: | p20@CDK5RAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CDK5RAP2_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 430bp_to_ENST00000484546_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.16e-26 | 1 |
seromucus secreting cell | 6.43e-14 | 2 |
central nervous system pericyte | 8.28e-14 | 2 |
keratocyte | 1.21e-13 | 2 |
migratory cranial neural crest cell | 1.21e-13 | 2 |
nucleus pulposus cell of intervertebral disc | 1.81e-09 | 3 |
pericyte cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.93e-26 | 1 |
head connective tissue | 1.21e-13 | 2 |
substantia propria of cornea | 1.21e-13 | 2 |
nucleus pulposus | 1.81e-09 | 3 |
axial mesoderm | 1.81e-09 | 3 |
notochord | 1.81e-09 | 3 |
chordamesoderm | 1.81e-09 | 3 |
stroma | 1.80e-07 | 4 |
cornea | 1.80e-07 | 4 |
eye surface | 1.80e-07 | 4 |
optic eminence | 1.80e-07 | 4 |
corneal primordium | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.16e-26 | 1 |