FFCP PHASE1:Hg19::chr2:236578261..236578264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116987 | |EntrezGene=116987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16922 | |HGNC=16922 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUN2 | |UniProt=E7EUN2 | ||
|association_with_transcript=13bp_to_ENST00000409538_5end | |association_with_transcript=13bp_to_ENST00000409538_5end | ||
|cluster_id=chr2:236578261..236578264,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_12_at_AGAP1_5end | |description=CAGE_peak_12_at_AGAP1_5end | ||
|id=chr2:236578261..236578264,+ | |id=chr2:236578261..236578264,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.96e-60;5!CL:0000163;1.17e-33;9!CL:0000151;4.28e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.37e-60,5;CL:0002028,7.37e-60,5;CL:0000163,9.92e-34,9;CL:0000151,4.73e-09,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.17e-15!57;UBERON:0005068!4.17e-15!57;UBERON:0006241!4.17e-15!57;UBERON:0007135!4.17e-15!57;UBERON:0001017!8.21e-15!82;UBERON:0005743!9.40e-15!86;UBERON:0000955!3.88e-14!69;UBERON:0006238!3.88e-14!69;UBERON:0001893!2.26e-13!34;UBERON:0002020!2.47e-13!34;UBERON:0003528!2.47e-13!34;UBERON:0000073!3.22e-13!94;UBERON:0001016!3.22e-13!94;UBERON:0002616!4.97e-13!59;UBERON:0002780!6.36e-13!41;UBERON:0001890!6.36e-13!41;UBERON:0006240!6.36e-13!41;UBERON:0002619!6.72e-13!22;UBERON:0003080!1.79e-12!42;UBERON:0001950!2.56e-12!20;UBERON:0002791!2.77e-12!33;UBERON:0002346!1.29e-11!90;UBERON:0001869!1.40e-11!32;UBERON:0000956!6.45e-11!25;UBERON:0000203!6.45e-11!25;UBERON:0003075!9.70e-11!86;UBERON:0007284!9.70e-11!86;UBERON:0007023!1.05e-10!115;UBERON:0003056!1.39e-10!61;UBERON:0000153!7.85e-09!129;UBERON:0007811!7.85e-09!129;UBERON:0000033!2.48e-08!123;UBERON:0001871!3.24e-07!7;UBERON:0000200!4.98e-07!6;UBERON:0000924!5.43e-07!173;UBERON:0006601!5.43e-07!173 | |ontology_enrichment_uberon=UBERON:0001049!4.17e-15!57;UBERON:0005068!4.17e-15!57;UBERON:0006241!4.17e-15!57;UBERON:0007135!4.17e-15!57;UBERON:0001017!8.21e-15!82;UBERON:0005743!9.40e-15!86;UBERON:0000955!3.88e-14!69;UBERON:0006238!3.88e-14!69;UBERON:0001893!2.26e-13!34;UBERON:0002020!2.47e-13!34;UBERON:0003528!2.47e-13!34;UBERON:0000073!3.22e-13!94;UBERON:0001016!3.22e-13!94;UBERON:0002616!4.97e-13!59;UBERON:0002780!6.36e-13!41;UBERON:0001890!6.36e-13!41;UBERON:0006240!6.36e-13!41;UBERON:0002619!6.72e-13!22;UBERON:0003080!1.79e-12!42;UBERON:0001950!2.56e-12!20;UBERON:0002791!2.77e-12!33;UBERON:0002346!1.29e-11!90;UBERON:0001869!1.40e-11!32;UBERON:0000956!6.45e-11!25;UBERON:0000203!6.45e-11!25;UBERON:0003075!9.70e-11!86;UBERON:0007284!9.70e-11!86;UBERON:0007023!1.05e-10!115;UBERON:0003056!1.39e-10!61;UBERON:0000153!7.85e-09!129;UBERON:0007811!7.85e-09!129;UBERON:0000033!2.48e-08!123;UBERON:0001871!3.24e-07!7;UBERON:0000200!4.98e-07!6;UBERON:0000924!5.43e-07!173;UBERON:0006601!5.43e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.07e-17;2!UBERON:0002114;2.19e-12;2!UBERON:0002108;5.92e-08;4!UBERON:0000200;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.27e-17,2;UBERON:0002114,2.31e-12,2;UBERON:0002108,6.13e-08,4;UBERON:0000200,9.49e-07,6 | |||
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| ||
|short_description=p12@AGAP1 | |short_description=p12@AGAP1 | ||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p12@AGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AGAP1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 13bp_to_ENST00000409538_5end |
EntrezGene: | AGAP1 |
HGNC: | 16922 |
UniProt: | E7EUN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.37e-60 | 5 |
basophil mast progenitor cell | 7.37e-60 | 5 |
endocrine cell | 9.92e-34 | 9 |
secretory cell | 4.73e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.27e-17 | 2 |
duodenum | 2.31e-12 | 2 |
small intestine | 6.13e-08 | 4 |
gyrus | 9.49e-07 | 6 |