FFCP PHASE1:Hg19::chr2:236578261..236578264,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116987 | |EntrezGene=116987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16922 | |HGNC=16922 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUN2 | |UniProt=E7EUN2 | ||
|association_with_transcript=13bp_to_ENST00000409538_5end | |association_with_transcript=13bp_to_ENST00000409538_5end | ||
|cluster_id=chr2:236578261..236578264,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_12_at_AGAP1_5end | |description=CAGE_peak_12_at_AGAP1_5end | ||
|id=chr2:236578261..236578264,+ | |id=chr2:236578261..236578264,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.96e-60;5!CL:0000163;1.17e-33;9!CL:0000151;4.28e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.37e-60,5;CL:0002028,7.37e-60,5;CL:0000163,9.92e-34,9;CL:0000151,4.73e-09,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.17e-15!57;UBERON:0005068!4.17e-15!57;UBERON:0006241!4.17e-15!57;UBERON:0007135!4.17e-15!57;UBERON:0001017!8.21e-15!82;UBERON:0005743!9.40e-15!86;UBERON:0000955!3.88e-14!69;UBERON:0006238!3.88e-14!69;UBERON:0001893!2.26e-13!34;UBERON:0002020!2.47e-13!34;UBERON:0003528!2.47e-13!34;UBERON:0000073!3.22e-13!94;UBERON:0001016!3.22e-13!94;UBERON:0002616!4.97e-13!59;UBERON:0002780!6.36e-13!41;UBERON:0001890!6.36e-13!41;UBERON:0006240!6.36e-13!41;UBERON:0002619!6.72e-13!22;UBERON:0003080!1.79e-12!42;UBERON:0001950!2.56e-12!20;UBERON:0002791!2.77e-12!33;UBERON:0002346!1.29e-11!90;UBERON:0001869!1.40e-11!32;UBERON:0000956!6.45e-11!25;UBERON:0000203!6.45e-11!25;UBERON:0003075!9.70e-11!86;UBERON:0007284!9.70e-11!86;UBERON:0007023!1.05e-10!115;UBERON:0003056!1.39e-10!61;UBERON:0000153!7.85e-09!129;UBERON:0007811!7.85e-09!129;UBERON:0000033!2.48e-08!123;UBERON:0001871!3.24e-07!7;UBERON:0000200!4.98e-07!6;UBERON:0000924!5.43e-07!173;UBERON:0006601!5.43e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.07e-17;2!UBERON:0002114;2.19e-12;2!UBERON:0002108;5.92e-08;4!UBERON:0000200;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.27e-17,2;UBERON:0002114,2.31e-12,2;UBERON:0002108,6.13e-08,4;UBERON:0000200,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.704387472105808,3.93923419527467,1.58531948758658,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0.508189248444927,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0,0,0.247127877893006,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0.329663433524666,0.0674035438541849,0,0,0,0.953423842781029,0,0.275078873194468,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.500763722825999,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0.478901577171454,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0,0,0.357382720883282,0.316027223465453,0.116241425368125,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0.150962843566674,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.320182037633146,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.704387472105808,3.93923419527467,1.58531948758658,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0.508189248444927,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0,0,0.247127877893006,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0.329663433524666,0.0674035438541849,0,0,0,0.953423842781029,0,0.275078873194468,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.500763722825999,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0.478901577171454,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0,0,0.357382720883282,0.316027223465453,0.116241425368125,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0.150962843566674,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.320182037633146,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p12@AGAP1 | |short_description=p12@AGAP1 | ||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p12@AGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AGAP1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 13bp_to_ENST00000409538_5end |
EntrezGene: | AGAP1 |
HGNC: | 16922 |
UniProt: | E7EUN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.37e-60 | 5 |
basophil mast progenitor cell | 7.37e-60 | 5 |
endocrine cell | 9.92e-34 | 9 |
secretory cell | 4.73e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.27e-17 | 2 |
duodenum | 2.31e-12 | 2 |
small intestine | 6.13e-08 | 4 |
gyrus | 9.49e-07 | 6 |