FFCP PHASE1:Hg19::chr14:50065693..50065746,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:50065693..50065746,+
|short_description=p2@LRR1
|description=CAGE_peak_2_at_LRR1_5end
|association_with_transcript=23bp_to_ENST00000540712_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=122769 | |EntrezGene=122769 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19742 | |HGNC=19742 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P393 | |UniProt=Q6P393 | ||
|association_with_transcript=23bp_to_ENST00000540712_5end | |||
|cluster_id=chr14:50065693..50065746,+ | |||
|description=CAGE_peak_2_at_LRR1_5end | |||
|id=chr14:50065693..50065746,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.73e-17!682;CL:0000548!4.02e-16!679;CL:0000004!4.02e-16!679;CL:0000255!4.02e-16!679;CL:0000037!3.95e-14!172;CL:0000566!3.95e-14!172;CL:0002032!7.53e-14!165;CL:0000837!7.53e-14!165;CL:0000988!9.82e-14!182;CL:0000063!2.63e-13!578;CL:0000003!1.66e-12!722;CL:0000763!1.02e-10!112;CL:0000049!1.02e-10!112;CL:0000219!2.33e-08!390;CL:0000144!2.00e-07!625;CL:0002031!5.71e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.18e-13,168;CL:0002032,4.15e-13,161;CL:0000837,4.15e-13,161;CL:0000988,5.43e-13,177;CL:0000763,3.20e-10,108;CL:0000049,3.20e-10,108;CL:0000219,1.71e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.00e-33!235;DOID:14566!4.10e-32!239;DOID:2531!4.61e-23!51;DOID:0060083!4.61e-23!51;DOID:0050686!1.15e-18!137;DOID:1240!1.50e-18!39;DOID:8692!6.94e-14!31;DOID:0050687!2.56e-12!143;DOID:305!2.28e-10!106;DOID:0060058!9.12e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.51e-14;39!DOID:2531;3.22e-14;51!DOID:0060083;3.22e-14;51!DOID:8692;9.89e-14;31!DOID:0060058;8.93e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.15e-33,235;DOID:14566,6.60e-32,239;DOID:2531,2.86e-23,51;DOID:0060083,2.86e-23,51;DOID:1240,1.03e-18,39;DOID:0050686,2.18e-18,137;DOID:8692,5.29e-14,31;DOID:0050687,3.04e-12,143;DOID:305,3.71e-10,106;DOID:0060058,8.13e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.42e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.56e-07;9!UBERON:0001557;2.56e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.02e-07,9 | |||
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| ||
|short_description=p2@LRR1 | |||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p2@LRR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000540712_5end |
EntrezGene: | LRR1 |
HGNC: | 19742 |
UniProt: | Q6P393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.18e-13 | 168 |
hematopoietic oligopotent progenitor cell | 4.15e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.15e-13 | 161 |
hematopoietic cell | 5.43e-13 | 177 |
myeloid cell | 3.20e-10 | 108 |
common myeloid progenitor | 3.20e-10 | 108 |
motile cell | 1.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.15e-33 | 235 |
disease of cellular proliferation | 6.60e-32 | 239 |
hematologic cancer | 2.86e-23 | 51 |
immune system cancer | 2.86e-23 | 51 |
leukemia | 1.03e-18 | 39 |
organ system cancer | 2.18e-18 | 137 |
myeloid leukemia | 5.29e-14 | 31 |
cell type cancer | 3.04e-12 | 143 |
carcinoma | 3.71e-10 | 106 |
lymphoma | 8.13e-07 | 10 |