FFCP PHASE1:Hg19::chr2:234601924..234601944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54578 | |EntrezGene=54578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |HGNC=12538 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-366bp_to_ENST00000484784_5end | |association_with_transcript=-366bp_to_ENST00000484784_5end | ||
|cluster_id=chr2:234601924..234601944,+ | |||
|coexpression_cluster_id=C1504 | |||
|description=CAGE_peak_9_at_UGT1A6_5end | |description=CAGE_peak_9_at_UGT1A6_5end | ||
|id=chr2:234601924..234601944,+ | |id=chr2:234601924..234601944,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.60e-10!254;CL:0000223!6.78e-10!59;CL:1001319!3.01e-07!1;CL:1000600!3.01e-07!1;CL:0000313!4.57e-07!1 | |ontology_enrichment_celltype=CL:0000066!3.60e-10!254;CL:0000223!6.78e-10!59;CL:1001319!3.01e-07!1;CL:1000600!3.01e-07!1;CL:0000313!4.57e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:1001319;1.78e-16;1!CL:1000600;1.78e-16;1!CL:0000182;4.51e-12;12!CL:1000415;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,3.07e-16,1;CL:1000600,3.07e-16,1;CL:0000182,5.06e-12,12;CL:0000223,2.50e-09,58;CL:1000415,5.49e-09,2;CL:0000066,1.39e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.84e-11;13!UBERON:0001041;1.81e-08;30 | |||
|ontology_enrichment_disease=DOID:305!7.56e-18!106;DOID:0050687!1.37e-13!143;DOID:1749!2.14e-10!14;DOID:162!3.02e-08!235;DOID:14566!5.62e-08!239;DOID:299!6.94e-08!25;DOID:5662!1.65e-07!1;DOID:2152!4.57e-07!1;DOID:3151!4.85e-07!1;DOID:3149!4.85e-07!1;DOID:0050619!8.18e-07!1;DOID:1357!8.18e-07!1 | |ontology_enrichment_disease=DOID:305!7.56e-18!106;DOID:0050687!1.37e-13!143;DOID:1749!2.14e-10!14;DOID:162!3.02e-08!235;DOID:14566!5.62e-08!239;DOID:299!6.94e-08!25;DOID:5662!1.65e-07!1;DOID:2152!4.57e-07!1;DOID:3151!4.85e-07!1;DOID:3149!4.85e-07!1;DOID:0050619!8.18e-07!1;DOID:1357!8.18e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5662;7.57e-17;1!DOID:3493;6.67e-09;2!DOID:7;9.57e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.47e-17,1;DOID:305,1.77e-16,106;DOID:0050687,5.99e-12,143;DOID:7,6.45e-10,39;DOID:3493,5.08e-09,2;DOID:162,8.70e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001255!1.92e-12!2;UBERON:0001556!1.92e-12!2;UBERON:0004119!3.26e-08!169;UBERON:0000925!3.26e-08!169;UBERON:0006595!3.26e-08!169;UBERON:0004645!3.01e-07!1;UBERON:0001256!3.01e-07!1;UBERON:0001259!3.01e-07!1;UBERON:0000997!4.31e-07!1;UBERON:0005056!4.31e-07!1;UBERON:0004911!4.57e-07!1;UBERON:0001764!8.18e-07!1;UBERON:0001825!8.18e-07!1 | |ontology_enrichment_uberon=UBERON:0001255!1.92e-12!2;UBERON:0001556!1.92e-12!2;UBERON:0004119!3.26e-08!169;UBERON:0000925!3.26e-08!169;UBERON:0006595!3.26e-08!169;UBERON:0004645!3.01e-07!1;UBERON:0001256!3.01e-07!1;UBERON:0001259!3.01e-07!1;UBERON:0000997!4.31e-07!1;UBERON:0005056!4.31e-07!1;UBERON:0004911!4.57e-07!1;UBERON:0001764!8.18e-07!1;UBERON:0001825!8.18e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.78e-16;1!UBERON:0001256;1.78e-16;1!UBERON:0001259;1.78e-16;1!UBERON:0002423;2.64e-15;25!UBERON:0002294;1.02e-09;7!UBERON:0001173;1.02e-09;7!UBERON:0006562;3.57e-09;2!UBERON:0001255;6.67e-09;2!UBERON:0001556;6.67e-09;2!UBERON:0002107;7.81e-08;19!UBERON:0006925;7.81e-08;19!UBERON:0005172;4.07e-07;52!UBERON:0005173;4.07e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.07e-16,1;UBERON:0001256,3.07e-16,1;UBERON:0001259,3.07e-16,1;UBERON:0009497,2.76e-15,25;UBERON:0000015,2.76e-15,25;UBERON:0002423,2.76e-15,25;UBERON:0006235,2.76e-15,25;UBERON:0004161,2.76e-15,25;UBERON:0008835,2.09e-11,22;UBERON:0003894,2.09e-11,22;UBERON:0009854,6.37e-11,23;UBERON:0007499,4.52e-10,25;UBERON:0009856,1.08e-09,26;UBERON:0001255,8.74e-09,2;UBERON:0001556,8.74e-09,2;UBERON:0005911,1.27e-08,82;UBERON:0002107,8.38e-08,19;UBERON:0006925,8.38e-08,19;UBERON:0008836,8.38e-08,19;UBERON:0002294,8.90e-08,9;UBERON:0001173,8.90e-08,9;UBERON:0004912,8.90e-08,9;UBERON:0001007,1.19e-07,145;UBERON:0001555,1.19e-07,145;UBERON:0007026,1.19e-07,145;UBERON:0003929,4.49e-07,54;UBERON:0005172,4.67e-07,54;UBERON:0005173,4.67e-07,54;UBERON:0005177,6.85e-07,101;UBERON:0004119,7.50e-07,160;UBERON:0000925,7.50e-07,160;UBERON:0006595,7.50e-07,160 | |||
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|short_description=p9@UGT1A6 | |short_description=p9@UGT1A6 | ||
}} | }} |
Latest revision as of 23:32, 15 September 2015
Short description: | p9@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_UGT1A6_5end |
Coexpression cluster: | C1504_signet_endometrial_bile_hepatoma_kidney_mesothelioma_liver |
Association with transcript: | -366bp_to_ENST00000484784_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.07e-16 | 1 |
lower urinary tract cell | 3.07e-16 | 1 |
hepatocyte | 5.06e-12 | 12 |
endodermal cell | 2.50e-09 | 58 |
epithelial cell of gall bladder | 5.49e-09 | 2 |
epithelial cell | 1.39e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.07e-16 | 1 |
wall of urinary bladder | 3.07e-16 | 1 |
mucosa of urinary bladder | 3.07e-16 | 1 |
epithelium of foregut-midgut junction | 2.76e-15 | 25 |
anatomical boundary | 2.76e-15 | 25 |
hepatobiliary system | 2.76e-15 | 25 |
foregut-midgut junction | 2.76e-15 | 25 |
septum transversum | 2.76e-15 | 25 |
hepatic diverticulum | 2.09e-11 | 22 |
liver primordium | 2.09e-11 | 22 |
digestive tract diverticulum | 6.37e-11 | 23 |
epithelial sac | 4.52e-10 | 25 |
sac | 1.08e-09 | 26 |
urinary bladder | 8.74e-09 | 2 |
lower urinary tract | 8.74e-09 | 2 |
endo-epithelium | 1.27e-08 | 82 |
liver | 8.38e-08 | 19 |
digestive gland | 8.38e-08 | 19 |
liver bud | 8.38e-08 | 19 |
biliary system | 8.90e-08 | 9 |
biliary tree | 8.90e-08 | 9 |
biliary bud | 8.90e-08 | 9 |
digestive system | 1.19e-07 | 145 |
digestive tract | 1.19e-07 | 145 |
primitive gut | 1.19e-07 | 145 |
gut epithelium | 4.49e-07 | 54 |
abdomen element | 4.67e-07 | 54 |
abdominal segment element | 4.67e-07 | 54 |
trunk region element | 6.85e-07 | 101 |
endoderm-derived structure | 7.50e-07 | 160 |
endoderm | 7.50e-07 | 160 |
presumptive endoderm | 7.50e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.47e-17 | 1 |
carcinoma | 1.77e-16 | 106 |
cell type cancer | 5.99e-12 | 143 |
disease of anatomical entity | 6.45e-10 | 39 |
signet ring cell adenocarcinoma | 5.08e-09 | 2 |
cancer | 8.70e-07 | 235 |