FFCP PHASE1:Hg19::chr2:233246589..233246598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=250 | |EntrezGene=250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=439 | |HGNC=439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_AF217992_5end | |association_with_transcript=117bp_to_AF217992_5end | ||
|cluster_id=chr2:233246589..233246598,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_12_at_ALPP_5end | |description=CAGE_peak_12_at_ALPP_5end | ||
|id=chr2:233246589..233246598,+ | |id=chr2:233246589..233246598,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.58e-16!3 | |ontology_enrichment_celltype=CL:0002541!2.58e-16!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.67e-48;29!UBERON:0003124;4.58e-23;1!UBERON:0006595;1.90e-10;86 | |||
|ontology_enrichment_disease=DOID:305!4.84e-12!106;DOID:0050687!1.54e-08!143 | |ontology_enrichment_disease=DOID:305!4.84e-12!106;DOID:0050687!1.54e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.95e-13,106;DOID:0050687,1.14e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.73e-105!9;UBERON:0001557!1.81e-49!19;UBERON:0008947!2.81e-24!38;UBERON:0003258!2.81e-24!38;UBERON:0000072!6.98e-20!46;UBERON:0000065!4.02e-17!53;UBERON:0000476!2.58e-16!3;UBERON:0000920!2.58e-16!3;UBERON:0003124!1.59e-15!7;UBERON:0001004!3.49e-15!72;UBERON:0001041!7.76e-11!98;UBERON:0004119!5.74e-10!169;UBERON:0000925!5.74e-10!169;UBERON:0006595!5.74e-10!169;UBERON:0000077!1.40e-09!130;UBERON:0004921!1.51e-09!129;UBERON:0004185!1.51e-09!129;UBERON:0001007!2.92e-09!155;UBERON:0001555!2.92e-09!155;UBERON:0007026!2.92e-09!155;UBERON:0000063!7.31e-09!97;UBERON:0000064!1.30e-08!219;UBERON:0005631!4.82e-08!14;UBERON:0000158!4.82e-08!14 | |ontology_enrichment_uberon=UBERON:0001737!2.73e-105!9;UBERON:0001557!1.81e-49!19;UBERON:0008947!2.81e-24!38;UBERON:0003258!2.81e-24!38;UBERON:0000072!6.98e-20!46;UBERON:0000065!4.02e-17!53;UBERON:0000476!2.58e-16!3;UBERON:0000920!2.58e-16!3;UBERON:0003124!1.59e-15!7;UBERON:0001004!3.49e-15!72;UBERON:0001041!7.76e-11!98;UBERON:0004119!5.74e-10!169;UBERON:0000925!5.74e-10!169;UBERON:0006595!5.74e-10!169;UBERON:0000077!1.40e-09!130;UBERON:0004921!1.51e-09!129;UBERON:0004185!1.51e-09!129;UBERON:0001007!2.92e-09!155;UBERON:0001555!2.92e-09!155;UBERON:0007026!2.92e-09!155;UBERON:0000063!7.31e-09!97;UBERON:0000064!1.30e-08!219;UBERON:0005631!4.82e-08!14;UBERON:0000158!4.82e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-154;9!UBERON:0001557;1.10e-154;9!UBERON:0000072;1.30e-34;37!UBERON:0000065;2.26e-31;44!UBERON:0001004;8.00e-16;65!UBERON:0001987;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.97e-155,9;UBERON:0001557,1.92e-73,19;UBERON:0008947,8.72e-37,38;UBERON:0003258,8.72e-37,38;UBERON:0000072,9.52e-30,47;UBERON:0000065,6.86e-26,54;UBERON:0001004,7.11e-19,74;UBERON:0001041,4.91e-16,87;UBERON:0004921,1.13e-11,118;UBERON:0004119,7.41e-11,160;UBERON:0000925,7.41e-11,160;UBERON:0006595,7.41e-11,160;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0001048,1.30e-08,160;UBERON:0001987,9.63e-07,4;UBERON:0004340,9.63e-07,4 | |||
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|short_description=p12@ALPP | |short_description=p12@ALPP | ||
}} | }} |
Latest revision as of 21:09, 15 September 2015
Short description: | p12@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 117bp_to_AF217992_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 9.97e-155 | 9 |
upper respiratory tract | 1.92e-73 | 19 |
respiratory primordium | 8.72e-37 | 38 |
endoderm of foregut | 8.72e-37 | 38 |
segment of respiratory tract | 9.52e-30 | 47 |
respiratory tract | 6.86e-26 | 54 |
respiratory system | 7.11e-19 | 74 |
foregut | 4.91e-16 | 87 |
subdivision of digestive tract | 1.13e-11 | 118 |
endoderm-derived structure | 7.41e-11 | 160 |
endoderm | 7.41e-11 | 160 |
presumptive endoderm | 7.41e-11 | 160 |
digestive system | 1.82e-09 | 145 |
digestive tract | 1.82e-09 | 145 |
primitive gut | 1.82e-09 | 145 |
primordium | 1.30e-08 | 160 |
placenta | 9.63e-07 | 4 |
allantois | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.95e-13 | 106 |
cell type cancer | 1.14e-09 | 143 |