FFCP PHASE1:Hg19::chr8:97506007..97506016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6383 | |EntrezGene=6383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10659 | |HGNC=10659 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESK6,Q6PIS6,F5H0S6 | |UniProt=E7ESK6,Q6PIS6,F5H0S6 | ||
|association_with_transcript=-24bp_to_ENST00000518385,ENST00000519587,ENST00000520233,ENST00000545117,ENST00000546193_5end | |association_with_transcript=-24bp_to_ENST00000518385,ENST00000519587,ENST00000520233,ENST00000545117,ENST00000546193_5end | ||
|cluster_id=chr8:97506007..97506016,+ | |||
|coexpression_cluster_id=C4784 | |||
|description=CAGE_peak_3_at_SDC2_5end | |description=CAGE_peak_3_at_SDC2_5end | ||
|id=chr8:97506007..97506016,+ | |id=chr8:97506007..97506016,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.72e-15!180;CL:0000057!3.65e-12!75;CL:0002620!3.35e-09!23;CL:0000136!9.90e-09!15 | |ontology_enrichment_celltype=CL:0000055!7.72e-15!180;CL:0000057!3.65e-12!75;CL:0002620!3.35e-09!23;CL:0000136!9.90e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.76e-10;23!CL:0000136;2.74e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.24e-12,76;CL:0002620,7.21e-10,23;CL:0000136,2.34e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.24e-12!659;UBERON:0000062!2.60e-09!511;UBERON:0000467!1.28e-08!625;UBERON:0000480!2.12e-08!626;UBERON:0002199!6.69e-08!45;UBERON:0002416!6.69e-08!45;UBERON:0000475!9.57e-08!365;UBERON:0002097!9.20e-07!40 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.11e-08,46;UBERON:0002416,2.11e-08,46;UBERON:0000479,2.34e-08,773;UBERON:0002097,3.59e-07,41 | |||
|phase1_expression=9.26559734279839,5.78071414505655,7.61153782118244,10.007329835313,6.70441641640932,9.59572376510406,5.06599756336621,5.68547886084148,3.91778442299758,0.982935746006035,0,1.74753097704138,2.90143676051299,3.46545788288131,2.98257638155124,0.672325146451775,3.61616716814386,0.730310090387373,3.90346239032406,7.51038454268406,3.4680117511523,2.82109249330279,4.86601178122796,2.87436292653057,5.77496142136093,0,0,0,0,0.383829398097213,1.85779347979291,0.919421224478927,0,0.369754010166788,0,0,0,0.553995408531877,1.20326668482085,0,0.447830948479849,1.29557466407592,1.28787783817093,1.89017710413434,1.13362783106643,0.727752183563449,2.78914844286822,0.822335776043652,0.619412741790207,2.8769239232215,0.256160706529101,0.236482229888585,4.13694816883942,1.29096936716765,0,3.20011977222428,1.63743690034707,0.674170453335254,3.67300670845083,1.28371610830437,0.639337125799041,1.64925650093358,0.199463657621632,0.426224750532694,3.19230162491442,0.56738522469114,0,1.7587406567972,0,0,4.23779651843358,0.736555271975129,0.632924774881769,0,0.212604299965044,0.838634582033504,1.01095768031846,0.600707571366025,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.06870148424473,11.2046137239216,18.048164782892,7.82171202388448,21.4727205703797,8.75942766544745,3.02511414925017,4.43458794925128,3.33772185633879,2.03017567021455,0,0,9.7364218096405,11.6666923990509,13.4287540124054,0,0,0,0,0.860234595106124,0,0,0,0.550236083880135,0.208994966536811,0.775250277507987,0.71153252537342,0.66944122552934,0.805658634218294,0,0,0,0,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,3.87780264148325,0,6.95760732373446,2.65924074495618,1.72131935057184,6.88407889797153,1.41867352879343,0.560677600142307,2.1349799145941,3.20667812942308,1.8672662123986,1.0776853765575,0.490385709340376,5.75158225050739,6.33793516927999,1.64025002283658,3.1216007683032,1.71141546463335,3.58676833324323,1.996386476944,2.10434827678571,2.52811452064047,1.42907919878425,0.245668634623536,2.6864703105699,4.75201142912821,4.94533858557114,0.910161361938026,4.31170885089743,1.34668891163253,1.25118519871964,0.277064115484183,4.82875382968922,4.29082914118628,6.15976041517047,2.49550802952046,12.7366641339092,11.3185416073841,6.99375273826554,10.2030972668697,4.74041634496819,11.5938243020533,11.1670113798954,11.6455669246474,5.74878330451072,7.32057945307932,5.52299391853796,6.30419621593366,18.1054892183473,6.95189477770718,7.46066606166146,0,0,0.286804595389004,0.487894824518382,0.927708378250397,0.348581828608555,2.07322110030741,1.00928340350251,1.45990943630332,3.12899064659632,6.43240938192885,5.52539685409922,6.96551892047969,4.33127689001751,3.66751080123516,3.87744787179634,3.37415441836875,3.74999507290139,2.83243277320128,4.27087114399974,3.7752766284846,3.72820783738158,3.46272441251751,0,0,2.057870056657,0,8.87285243752816,7.86261773342101,5.31710916013264,0,1.10689594688802,6.6911446016425,0.878002283269004,0,0.201057944823262,0.555530670951178,1.62904152655162,3.11980435583874,2.88662684050547,6.4921026786043,6.69229557144183,0.866198686566443,0.925971025153221,0.190254152234598,1.58040879591855,0.858486162094873,9.1100292252337,13.806251643215,12.3363864699644,0,0,0,0.626909658919938,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0,0.12624243342638,0.63497894292169,1.14596527667483,0,0,0.822619941626588,0,0.857479297891735,7.17638939810309,4.79556075716608,7.4805051537369,2.19761916788222,0,2.535908257668,2.6593811658487,1.04007436911366,1.28603687131071,0,1.8649552531127,2.7165818795048,4.88359444852299,3.29296134712308,3.90883421152482,0.710783897485092,0.791951872933429,1.80863626235752,1.74306691720059,1.09970290300263,0,1.00451418286425,4.21667878966063,16.5341150289192,22.9723871668228,1.42636905040718,3.4747513600219,1.02738161275192,1.25342674267927,0,0,0,0,2.7950408664471,0,1.54657762555539,1.00509759200609,0.637938751653163,0,2.99161459204025,0.414415513436035,4.17151071845076,3.00102312635806,4.34024037919577,6.86303843051664,4.10386674233472,5.20417969611984,3.63138386477411,4.51419149591578,2.27407504055985,6.2083842775503,10.627609576567,3.68738337083406,0.695068915744663,4.11182430671755,3.43143423810856,0.413536052245775,1.07857100409308,0,1.81876542867756,1.66435439510497,3.93107381328584,9.17998888929474,13.3511916760614,10.1037633995906,8.58532300013196,13.816095724801,6.91671860917512,4.45254199334973,2.92998418225046,2.30830242907065,3.53146770859379,1.55776328755086,2.44041794765914,1.0877350463246,0.601519410909855,0,0.459257792658427,0.182091168006717,1.04899531967539,3.15839729035188,2.23344477602803,2.35304930753057,1.46139224653261,3.58875538235777,1.13733384070897,0.510281115829547,3.45465465763423,0,1.62567862526312,1.50506932156456,3.05851527654046,0,3.1342465661105,0,0,2.82095137628028,1.96808787419823,1.95227036798582,5.87333766392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| ||
|short_description=p3@SDC2 | |short_description=p3@SDC2 | ||
}} | }} |
Latest revision as of 14:17, 19 September 2015
Short description: | p3@SDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SDC2_5end |
Coexpression cluster: | C4784_medulloblastoma_Multipotent_osteoclastoma_mesodermal_Dendritic_Macrophage_Chondrocyte |
Association with transcript: | -24bp_to_ENST00000518385, ENST00000519587, ENST00000520233, ENST00000545117, ENST00000546193_5end |
EntrezGene: | SDC2 |
HGNC: | 10659 |
UniProt: | E7ESK6Q6PIS6F5H0S6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.24e-12 | 76 |
skin fibroblast | 7.21e-10 | 23 |
fat cell | 2.34e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
integument | 2.11e-08 | 46 |
integumental system | 2.11e-08 | 46 |
tissue | 2.34e-08 | 773 |
skin of body | 3.59e-07 | 41 |