FFCP PHASE1:Hg19::chr2:220363579..220363641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29926 | |EntrezGene=29926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22923 | |HGNC=22923 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IJ6,C9JAH0,F8WD54,C9J255 | |UniProt=Q96IJ6,C9JAH0,F8WD54,C9J255 | ||
|association_with_transcript=0bp_to_ENST00000313597,ENST00000341142,ENST00000358215,ENST00000373908,ENST00000373917,ENST00000435316,ENST00000443704,ENST00000455657,ENST00000480506,NM_013335,NM_205847,uc002vlr.2,uc002vls.2,uc002vlt.2,uc002vlu.2,uc002vlv.2,uc002vlw.2,uc002vlx.2_5end | |association_with_transcript=0bp_to_ENST00000313597,ENST00000341142,ENST00000358215,ENST00000373908,ENST00000373917,ENST00000435316,ENST00000443704,ENST00000455657,ENST00000480506,NM_013335,NM_205847,uc002vlr.2,uc002vls.2,uc002vlt.2,uc002vlu.2,uc002vlv.2,uc002vlw.2,uc002vlx.2_5end | ||
|cluster_id=chr2:220363579..220363641,+ | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_1_at_GMPPA_5end | |description=CAGE_peak_1_at_GMPPA_5end | ||
|id=chr2:220363579..220363641,+ | |id=chr2:220363579..220363641,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.65e-30!180;CL:0002371!9.41e-22!591;CL:0000548!1.03e-20!679;CL:0000004!1.03e-20!679;CL:0000255!1.03e-20!679;CL:0000012!1.03e-19!682;CL:0000144!3.08e-19!625;CL:0000183!4.91e-19!59;CL:0000680!1.13e-17!57;CL:0000056!1.13e-17!57;CL:0000355!1.13e-17!57;CL:0000187!4.05e-17!54;CL:0000192!1.41e-16!42;CL:0000514!1.41e-16!42;CL:0000057!5.58e-16!75;CL:0000003!1.29e-15!722;CL:0000222!2.89e-14!119;CL:0000393!6.67e-14!60;CL:0000211!6.67e-14!60;CL:0000359!1.09e-13!32;CL:0000220!1.53e-13!246;CL:0002321!3.81e-13!248;CL:0000048!4.11e-08!430;CL:0000723!4.22e-08!436;CL:0000034!2.92e-07!444 | |ontology_enrichment_celltype=CL:0000055!7.65e-30!180;CL:0002371!9.41e-22!591;CL:0000548!1.03e-20!679;CL:0000004!1.03e-20!679;CL:0000255!1.03e-20!679;CL:0000012!1.03e-19!682;CL:0000144!3.08e-19!625;CL:0000183!4.91e-19!59;CL:0000680!1.13e-17!57;CL:0000056!1.13e-17!57;CL:0000355!1.13e-17!57;CL:0000187!4.05e-17!54;CL:0000192!1.41e-16!42;CL:0000514!1.41e-16!42;CL:0000057!5.58e-16!75;CL:0000003!1.29e-15!722;CL:0000222!2.89e-14!119;CL:0000393!6.67e-14!60;CL:0000211!6.67e-14!60;CL:0000359!1.09e-13!32;CL:0000220!1.53e-13!246;CL:0002321!3.81e-13!248;CL:0000048!4.11e-08!430;CL:0000723!4.22e-08!436;CL:0000034!2.92e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.53e-13;32!CL:0000192;5.85e-12;43!CL:0000187;1.48e-09;55!CL:0000134;6.50e-09;55!CL:0000393;9.38e-08;61!CL:0000211;9.38e-08;61!CL:0000723;1.46e-07;61!CL:0000048;1.92e-07;58!CL:0000057;4.64e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.62e-17,58;CL:0000056,1.62e-17,58;CL:0000355,1.62e-17,58;CL:0000187,5.90e-17,55;CL:0000192,2.34e-16,43;CL:0000514,2.34e-16,43;CL:0000057,8.30e-16,76;CL:0000222,3.07e-14,121;CL:0000393,8.43e-14,61;CL:0000211,8.43e-14,61;CL:0000359,1.09e-13,32;CL:0002321,3.37e-13,250;CL:0000048,1.28e-08,427;CL:0000723,1.32e-08,433;CL:0000034,9.87e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;5.85e-12;43!CL:0000355;1.47e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.83e-22!143;UBERON:0000914!1.37e-17!83;UBERON:0002329!1.37e-17!83;UBERON:0003077!1.37e-17!83;UBERON:0003059!1.37e-17!83;UBERON:0007282!1.37e-17!83;UBERON:0009618!1.37e-17!83;UBERON:0007285!1.37e-17!83;UBERON:0004290!1.48e-16!70;UBERON:0002100!1.88e-16!216;UBERON:0000486!2.26e-16!82;UBERON:0003914!5.83e-15!118;UBERON:0001134!1.14e-14!61;UBERON:0002036!1.14e-14!61;UBERON:0003082!1.14e-14!61;UBERON:0002385!4.15e-14!63;UBERON:0001015!4.15e-14!63;UBERON:0000383!4.15e-14!63;UBERON:0003104!1.20e-13!238;UBERON:0009142!1.20e-13!238;UBERON:0000490!4.94e-13!138;UBERON:0000475!6.98e-13!365;UBERON:0001637!1.22e-11!42;UBERON:0003509!1.22e-11!42;UBERON:0004572!1.22e-11!42;UBERON:0004872!8.00e-11!84;UBERON:0000119!2.24e-10!312;UBERON:0002049!5.77e-10!79;UBERON:0007798!5.77e-10!79;UBERON:0000483!5.97e-10!309;UBERON:0000481!2.48e-09!347;UBERON:0004573!2.51e-09!33;UBERON:0004571!2.51e-09!33;UBERON:0002199!4.46e-09!45;UBERON:0002416!4.46e-09!45;UBERON:0001981!2.08e-08!60;UBERON:0007500!2.08e-08!60;UBERON:0004537!2.08e-08!60;UBERON:0006965!2.08e-08!60;UBERON:0004535!3.56e-08!110;UBERON:0000055!3.78e-08!69;UBERON:0000926!1.01e-07!448;UBERON:0004120!1.01e-07!448;UBERON:0006603!1.01e-07!448;UBERON:0001009!1.34e-07!113;UBERON:0003102!1.66e-07!95;UBERON:0002097!1.76e-07!40;UBERON:0009569!2.73e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.55e-08;33!UBERON:0004571;2.55e-08;33!UBERON:0001637;4.52e-08;42!UBERON:0003509;4.52e-08;42!UBERON:0004572;4.52e-08;42!UBERON:0003102;3.87e-07;50 | |||
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|short_description=p1@GMPPA | |short_description=p1@GMPPA | ||
}} | }} |
Latest revision as of 21:36, 24 September 2015
Short description: | p1@GMPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GMPPA_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000313597, ENST00000341142, ENST00000358215, ENST00000373908, ENST00000373917, ENST00000435316, ENST00000443704, ENST00000455657, ENST00000480506, NM_013335, NM_205847, uc002vlr.2, uc002vls.2, uc002vlt.2, uc002vlu.2, uc002vlv.2, uc002vlw.2, uc002vlx.2_5end |
EntrezGene: | GMPPA |
HGNC: | 22923 |
UniProt: | Q96IJ6C9JAH0F8WD54C9J255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.62e-17 | 58 |
myoblast | 1.62e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.62e-17 | 58 |
muscle cell | 5.90e-17 | 55 |
smooth muscle cell | 2.34e-16 | 43 |
smooth muscle myoblast | 2.34e-16 | 43 |
fibroblast | 8.30e-16 | 76 |
mesodermal cell | 3.07e-14 | 121 |
electrically responsive cell | 8.43e-14 | 61 |
electrically active cell | 8.43e-14 | 61 |
vascular associated smooth muscle cell | 1.09e-13 | 32 |
embryonic cell | 3.37e-13 | 250 |
multi fate stem cell | 1.28e-08 | 427 |
somatic stem cell | 1.32e-08 | 433 |
stem cell | 9.87e-08 | 441 |