FFCP PHASE1:Hg19::chr2:219575631..219575648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9654 | |EntrezGene=9654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28976 | |HGNC=28976 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3I1 | |UniProt=C9J3I1 | ||
|association_with_transcript=0bp_to_ENST00000437755_5end | |association_with_transcript=0bp_to_ENST00000437755_5end | ||
|cluster_id=chr2:219575631..219575648,+ | |||
|description=CAGE_peak_3_at_TTLL4_5end | |description=CAGE_peak_3_at_TTLL4_5end | ||
|id=chr2:219575631..219575648,+ | |id=chr2:219575631..219575648,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.65e-11!94;UBERON:0001016!6.65e-11!94;UBERON:0005743!2.14e-10!86;UBERON:0002346!1.34e-09!90;UBERON:0001017!7.59e-09!82;UBERON:0003075!8.48e-09!86;UBERON:0007284!8.48e-09!86;UBERON:0000955!1.81e-08!69;UBERON:0006238!1.81e-08!69;UBERON:0000924!4.14e-08!173;UBERON:0006601!4.14e-08!173;UBERON:0001049!8.72e-08!57;UBERON:0005068!8.72e-08!57;UBERON:0006241!8.72e-08!57;UBERON:0007135!8.72e-08!57;UBERON:0004121!1.84e-07!169;UBERON:0002616!1.98e-07!59 | |ontology_enrichment_uberon=UBERON:0000073!6.65e-11!94;UBERON:0001016!6.65e-11!94;UBERON:0005743!2.14e-10!86;UBERON:0002346!1.34e-09!90;UBERON:0001017!7.59e-09!82;UBERON:0003075!8.48e-09!86;UBERON:0007284!8.48e-09!86;UBERON:0000955!1.81e-08!69;UBERON:0006238!1.81e-08!69;UBERON:0000924!4.14e-08!173;UBERON:0006601!4.14e-08!173;UBERON:0001049!8.72e-08!57;UBERON:0005068!8.72e-08!57;UBERON:0006241!8.72e-08!57;UBERON:0007135!8.72e-08!57;UBERON:0004121!1.84e-07!169;UBERON:0002616!1.98e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000125;6.23e-09;9!UBERON:0002308;6.23e-09;9!UBERON:0009663;1.33e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.19e-11,86;UBERON:0001016,2.02e-11,89;UBERON:0003075,3.38e-11,82;UBERON:0007284,3.38e-11,82;UBERON:0004121,3.56e-11,171;UBERON:0000924,3.56e-11,171;UBERON:0006601,3.56e-11,171;UBERON:0001017,9.99e-11,81;UBERON:0010371,1.36e-10,104;UBERON:0000955,2.26e-10,68;UBERON:0006238,2.26e-10,68;UBERON:0000125,1.09e-09,9;UBERON:0002308,1.09e-09,9;UBERON:0001049,1.13e-08,56;UBERON:0005068,1.13e-08,56;UBERON:0006241,1.13e-08,56;UBERON:0007135,1.13e-08,56;UBERON:0009663,5.24e-08,7;UBERON:0000073,2.62e-07,53;UBERON:0002616,2.62e-07,53;UBERON:0000966,2.76e-07,6;UBERON:0005388,2.76e-07,6;UBERON:0001802,2.76e-07,6;UBERON:0003056,5.26e-07,61;UBERON:0002298,9.21e-07,6 | |||
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| ||
|short_description=p3@TTLL4 | |short_description=p3@TTLL4 | ||
}} | }} |
Latest revision as of 18:14, 24 September 2015
Short description: | p3@TTLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000437755_5end |
EntrezGene: | TTLL4 |
HGNC: | 28976 |
UniProt: | C9J3I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.19e-11 | 86 |
nervous system | 2.02e-11 | 89 |
neural plate | 3.38e-11 | 82 |
presumptive neural plate | 3.38e-11 | 82 |
ectoderm-derived structure | 3.56e-11 | 171 |
ectoderm | 3.56e-11 | 171 |
presumptive ectoderm | 3.56e-11 | 171 |
central nervous system | 9.99e-11 | 81 |
ecto-epithelium | 1.36e-10 | 104 |
brain | 2.26e-10 | 68 |
future brain | 2.26e-10 | 68 |
neural nucleus | 1.09e-09 | 9 |
nucleus of brain | 1.09e-09 | 9 |
neural tube | 1.13e-08 | 56 |
neural rod | 1.13e-08 | 56 |
future spinal cord | 1.13e-08 | 56 |
neural keel | 1.13e-08 | 56 |
telencephalic nucleus | 5.24e-08 | 7 |
regional part of nervous system | 2.62e-07 | 53 |
regional part of brain | 2.62e-07 | 53 |
retina | 2.76e-07 | 6 |
photoreceptor array | 2.76e-07 | 6 |
posterior segment of eyeball | 2.76e-07 | 6 |
pre-chordal neural plate | 5.26e-07 | 61 |
brainstem | 9.21e-07 | 6 |