FFCP PHASE1:Hg19::chr8:8204819..8204835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:8204819..8204835,- | |||
|coexpression_cluster_id=C4776 | |||
|description=CAGE_peak_at_chr8:8204819..8204835,- | |description=CAGE_peak_at_chr8:8204819..8204835,- | ||
|id=chr8:8204819..8204835,- | |id=chr8:8204819..8204835,- | ||
|ontology_enrichment_celltype=CL:0000115!8.42e-21!35;CL:0002139!1.34e-17!24;CL:0002078!6.06e-15!44;CL:0000071!4.27e-14!18;CL:0002546!4.27e-14!18;CL:0000037!6.57e-13!172;CL:0000566!6.57e-13!172;CL:0000988!2.30e-11!182;CL:0002087!6.68e-11!119;CL:0002032!7.55e-11!165;CL:0000837!7.55e-11!165;CL:0000738!9.87e-11!140;CL:0002031!2.28e-10!124;CL:1000413!6.82e-09!9;CL:0000791!3.01e-08!18;CL:0000789!3.01e-08!18;CL:0002420!3.01e-08!18;CL:0002419!3.01e-08!18;CL:0000790!3.01e-08!18;CL:0000213!4.88e-08!57;CL:0000215!4.88e-08!57 | |ontology_enrichment_celltype=CL:0000115!8.42e-21!35;CL:0002139!1.34e-17!24;CL:0002078!6.06e-15!44;CL:0000071!4.27e-14!18;CL:0002546!4.27e-14!18;CL:0000037!6.57e-13!172;CL:0000566!6.57e-13!172;CL:0000988!2.30e-11!182;CL:0002087!6.68e-11!119;CL:0002032!7.55e-11!165;CL:0000837!7.55e-11!165;CL:0000738!9.87e-11!140;CL:0002031!2.28e-10!124;CL:1000413!6.82e-09!9;CL:0000791!3.01e-08!18;CL:0000789!3.01e-08!18;CL:0002420!3.01e-08!18;CL:0002419!3.01e-08!18;CL:0000790!3.01e-08!18;CL:0000213!4.88e-08!57;CL:0000215!4.88e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.62e-32;36!CL:0002139;5.09e-26;24!CL:0000071;1.27e-25;18!CL:0002078;4.94e-17;45!CL:1000413;6.83e-17;9!CL:0000213;3.09e-12;58!CL:0000215;3.09e-12;58!CL:0002544;4.27e-12;6!CL:0000235;4.98e-09;6!CL:0002543;2.30e-08;6!CL:0000784;6.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.39e-36,36;CL:0002078,1.83e-27,45;CL:0002139,4.06e-26,24;CL:0000071,1.06e-25,18;CL:0002546,1.06e-25,18;CL:0000213,2.31e-19,58;CL:0000215,2.31e-19,58;CL:1000413,7.22e-17,9;CL:0002544,4.53e-12,6;CL:0000235,5.02e-09,6;CL:0002543,1.85e-08,6;CL:0000037,2.80e-08,168;CL:0000988,2.29e-07,177;CL:0000763,7.42e-07,108;CL:0000049,7.42e-07,108;CL:0000784,8.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.27e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.12e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.20e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-23!115;UBERON:0001986!4.27e-14!18;UBERON:0004638!4.27e-14!18;UBERON:0004852!4.27e-14!18;UBERON:0002193!9.48e-13!112;UBERON:0000487!3.33e-11!22;UBERON:0003081!1.84e-10!216;UBERON:0001049!2.46e-10!57;UBERON:0005068!2.46e-10!57;UBERON:0006241!2.46e-10!57;UBERON:0007135!2.46e-10!57;UBERON:0002390!5.36e-10!102;UBERON:0003061!5.36e-10!102;UBERON:0006914!5.24e-09!25;UBERON:0003915!6.82e-09!9;UBERON:0004700!6.82e-09!9;UBERON:0001917!6.82e-09!9;UBERON:0002616!2.13e-08!59;UBERON:0002405!9.41e-08!115;UBERON:0003080!1.62e-07!42;UBERON:0002780!3.88e-07!41;UBERON:0001890!3.88e-07!41;UBERON:0006240!3.88e-07!41;UBERON:0000955!8.44e-07!69;UBERON:0006238!8.44e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.27e-25;18!UBERON:0001986;1.27e-25;18!UBERON:0004852;1.27e-25;18!UBERON:0000487;4.39e-20;22!UBERON:0006914;4.17e-17;25!UBERON:0003915;6.83e-17;9!UBERON:0004700;6.83e-17;9!UBERON:0001917;6.83e-17;9!UBERON:0000490;6.37e-11;33!UBERON:0000178;4.96e-08;15!UBERON:0000179;4.96e-08;15!UBERON:0000463;4.96e-08;15!UBERON:0001638;2.38e-07;9!UBERON:0003920;2.38e-07;9!UBERON:0004582;2.38e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.06e-25,18;UBERON:0001986,1.06e-25,18;UBERON:0004852,1.06e-25,18;UBERON:0000487,3.81e-20,22;UBERON:0006914,3.69e-17,25;UBERON:0003915,7.22e-17,9;UBERON:0004700,7.22e-17,9;UBERON:0001917,7.22e-17,9;UBERON:0003081,2.26e-12,203;UBERON:0002193,3.22e-10,108;UBERON:0004535,2.80e-09,109;UBERON:0001009,8.14e-09,112;UBERON:0002390,1.96e-08,98;UBERON:0003061,1.96e-08,98;UBERON:0000055,2.26e-08,68;UBERON:0000178,4.03e-08,15;UBERON:0000179,4.03e-08,15;UBERON:0000463,4.03e-08,15;UBERON:0001638,1.74e-07,9;UBERON:0003920,1.74e-07,9;UBERON:0004582,1.74e-07,9;UBERON:0007500,2.29e-07,59;UBERON:0001981,2.29e-07,59;UBERON:0004537,2.29e-07,59;UBERON:0006965,2.29e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.542270404062111,0.142169232487422,0,0,0,0,4.47830948479849,1.94336199611388,2.83333124397605,0.436194716338694,0,1.21292030593908,0,0,0,0,0,0.47296445977717,0.344745680736619,1.93645405075148,0,0,0,0.224723484445085,0,0.320929027076094,0,1.31940520074686,0.797854630486527,0.852449501065388,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.211255286311942,0,0.419317291016752,0.44931452458598,0.750884464207532,0.803627933485401,0.570025487482497,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.790152254325231,0.196709770113833,1.96505381374582,0.205601498999509,0.668745981562712,2.60737813306872,0.946895611469467,5.84480185223734,1.22551502573691,0.589211814949674,0,0.270803863765016,0.384273959177026,0.520237390239513,0.986627427622057,1.38175008892924,1.15921234294021,5.48660283699624,3.74557159325598,6.27213142829861,2.15287751125376,0.766440987203842,0.34362744548263,1.77113784413652,0.95569624297229,1.30216690771284,2.85135613334512,2.40920190524436,3.58362511232371,6.24653632761729,2.13099526839615,0.821127996921047,0,0,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.458426764241994,0,0,6.81549526674835,11.3184329244524,10.6366368415092,3.10037811596945,5.14795419702115,2.60020250930695,3.37896092523399,4.30117297553062,5.55424802572151,5.08777147731609,3.35599548967925,1.37559020970034,3.76190939766259,3.10100111003195,0.71153252537342,5.69025041699939,7.25092770796465,0.760272105718513,15.3759096255347,1.47065232138347,3.24056779152704,2.76829157680647,2.02076435363553,3.94140181691628,0,6.6448596169769,2.93122790288652,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.808264032418128,0.326923806226917,0.302714855289863,0,0,0,2.2818872861778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,1.40241773803446,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,1.52203321787679,0,0,6.64785916435973,0.936017060556951,5.05345951781676,0,0,0,0,0,0,0.985326475791887,0.264145302039678,0.414656231081544,0.720599767084807,0.12624243342638,0.190493682876507,0,1.17217447210047,0,0,1.20137223137567,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0,4.86495122564762,3.51579964002488,4.21667878966063,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.50999940573032,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,1.53084334748864,2.37507507712353,6.16909010761157,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,1.01489521846434,0,2.27858874869665,2.62054953003568,1.64544909234478,1.94541993357815,1.62009431171434,3.96562588147135,0,0,0,0,1.15415370381156,0,0.478278818186467,0.199579371432817,0.766021480529467,2.32840940996271,2.59697552219644,0.561594356226918,9.81409119842727,0.313359791546046,0,0.338583555603207,2.24823305145179,9.28278653078819,3.40676990152261,1.37402137902306,3.6868891717015,5.36822658941798,4.17122854279771,1.9538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0,0,3.5810065915881,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0.885741385813839,0.723578631752448,1.52581736317083,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,3.45356564069054,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.943615861729479,3.21031058919516,1.87411556580271,0.364909578431332,0,0,0,1.20990716048664,0.30607276163049,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,1.9166753044879,0,0,0.262887354279314,0.279282401272254,0.916641696046735,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0.0824158583811665,0,0,0.338693328263138,0,1.22583065500418,0,0,0,0,0,0.728994679896296,0,0.472834243795189,0.314727528809989,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.19009341568421,0,0,0.320362237703084,0,0.414239055347196,6.94632430536731,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.876336514945499,0.573409195690071,2.10765197920019,0.683060432355218,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,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| ||
|short_description=p@chr8:8204819..8204835,- | |short_description=p@chr8:8204819..8204835,- | ||
}} | }} |
Latest revision as of 20:06, 31 July 2015
Short description: | p@chr8:8204819..8204835, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:8204819..8204835, - |
Coexpression cluster: | C4776_Endothelial_Dendritic_CD4_acute_Renal_Hepatic_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.39e-36 | 36 |
meso-epithelial cell | 1.83e-27 | 45 |
endothelial cell of vascular tree | 4.06e-26 | 24 |
blood vessel endothelial cell | 1.06e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.06e-25 | 18 |
lining cell | 2.31e-19 | 58 |
barrier cell | 2.31e-19 | 58 |
endothelial cell of artery | 7.22e-17 | 9 |
aortic endothelial cell | 4.53e-12 | 6 |
macrophage | 5.02e-09 | 6 |
vein endothelial cell | 1.85e-08 | 6 |
hematopoietic stem cell | 2.80e-08 | 168 |
hematopoietic cell | 2.29e-07 | 177 |
myeloid cell | 7.42e-07 | 108 |
common myeloid progenitor | 7.42e-07 | 108 |
plasmacytoid dendritic cell | 8.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.06e-25 | 18 |
endothelium | 1.06e-25 | 18 |
cardiovascular system endothelium | 1.06e-25 | 18 |
simple squamous epithelium | 3.81e-20 | 22 |
squamous epithelium | 3.69e-17 | 25 |
endothelial tube | 7.22e-17 | 9 |
arterial system endothelium | 7.22e-17 | 9 |
endothelium of artery | 7.22e-17 | 9 |
lateral plate mesoderm | 2.26e-12 | 203 |
hemolymphoid system | 3.22e-10 | 108 |
cardiovascular system | 2.80e-09 | 109 |
circulatory system | 8.14e-09 | 112 |
hematopoietic system | 1.96e-08 | 98 |
blood island | 1.96e-08 | 98 |
vessel | 2.26e-08 | 68 |
blood | 4.03e-08 | 15 |
haemolymphatic fluid | 4.03e-08 | 15 |
organism substance | 4.03e-08 | 15 |
vein | 1.74e-07 | 9 |
venous blood vessel | 1.74e-07 | 9 |
venous system | 1.74e-07 | 9 |
epithelial tube open at both ends | 2.29e-07 | 59 |
blood vessel | 2.29e-07 | 59 |
blood vasculature | 2.29e-07 | 59 |
vascular cord | 2.29e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.20e-08 | 31 |