FFCP PHASE1:Hg19::chr2:216241247..216241253,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN21 | |UniProt=B4DN21 | ||
|association_with_transcript=68bp_to_AK297733_5end | |association_with_transcript=68bp_to_AK297733_5end | ||
|cluster_id=chr2:216241247..216241253,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_71_at_FN1_5end | |description=CAGE_peak_71_at_FN1_5end | ||
|id=chr2:216241247..216241253,- | |id=chr2:216241247..216241253,- | ||
|ontology_enrichment_celltype=CL:0000055!2.51e-23!180;CL:0000057!2.58e-21!75;CL:0002371!4.45e-12!591;CL:0002620!8.66e-12!23;CL:0000144!2.36e-10!625;CL:0000048!4.21e-09!430;CL:0000723!9.63e-09!436;CL:0000034!6.23e-08!444;CL:0000680!7.54e-08!57;CL:0000056!7.54e-08!57;CL:0000355!7.54e-08!57;CL:0002334!9.09e-08!12;CL:0000183!1.97e-07!59;CL:0000548!2.73e-07!679;CL:0000004!2.73e-07!679;CL:0000255!2.73e-07!679;CL:0000012!5.12e-07!682;CL:0000187!6.87e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.51e-23!180;CL:0000057!2.58e-21!75;CL:0002371!4.45e-12!591;CL:0002620!8.66e-12!23;CL:0000144!2.36e-10!625;CL:0000048!4.21e-09!430;CL:0000723!9.63e-09!436;CL:0000034!6.23e-08!444;CL:0000680!7.54e-08!57;CL:0000056!7.54e-08!57;CL:0000355!7.54e-08!57;CL:0002334!9.09e-08!12;CL:0000183!1.97e-07!59;CL:0000548!2.73e-07!679;CL:0000004!2.73e-07!679;CL:0000255!2.73e-07!679;CL:0000012!5.12e-07!682;CL:0000187!6.87e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002549;2.46e-08;2!CL:0002600;5.57e-08;2!CL:0002334;2.29e-07;12!CL:0002620;9.76e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.82e-13,76;CL:0002549,1.19e-08,2;CL:0002600,4.35e-08,2;CL:0002334,2.62e-07,12;CL:0002620,9.94e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.66e-07;5!DOID:450;4.66e-07;5!DOID:66;4.66e-07;5!DOID:423;4.66e-07;5!DOID:0080000;4.66e-07;5!DOID:11722;4.66e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.39e-07,5;DOID:450,4.39e-07,5;DOID:66,4.39e-07,5;DOID:423,4.39e-07,5;DOID:0080000,4.39e-07,5;DOID:11722,4.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.87e-09!83;UBERON:0002329!2.87e-09!83;UBERON:0003077!2.87e-09!83;UBERON:0003059!2.87e-09!83;UBERON:0007282!2.87e-09!83;UBERON:0009618!2.87e-09!83;UBERON:0007285!2.87e-09!83;UBERON:0002097!5.30e-09!40;UBERON:0004872!8.00e-09!84;UBERON:0002199!2.27e-08!45;UBERON:0002416!2.27e-08!45;UBERON:0004290!4.09e-08!70;UBERON:0003102!1.27e-07!95;UBERON:0000486!5.58e-07!82;UBERON:0002385!7.34e-07!63;UBERON:0001015!7.34e-07!63;UBERON:0000383!7.34e-07!63;UBERON:0001134!9.62e-07!61;UBERON:0002036!9.62e-07!61;UBERON:0003082!9.62e-07!61 | |ontology_enrichment_uberon=UBERON:0000914!2.87e-09!83;UBERON:0002329!2.87e-09!83;UBERON:0003077!2.87e-09!83;UBERON:0003059!2.87e-09!83;UBERON:0007282!2.87e-09!83;UBERON:0009618!2.87e-09!83;UBERON:0007285!2.87e-09!83;UBERON:0002097!5.30e-09!40;UBERON:0004872!8.00e-09!84;UBERON:0002199!2.27e-08!45;UBERON:0002416!2.27e-08!45;UBERON:0004290!4.09e-08!70;UBERON:0003102!1.27e-07!95;UBERON:0000486!5.58e-07!82;UBERON:0002385!7.34e-07!63;UBERON:0001015!7.34e-07!63;UBERON:0000383!7.34e-07!63;UBERON:0001134!9.62e-07!61;UBERON:0002036!9.62e-07!61;UBERON:0003082!9.62e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.06e-08;2!UBERON:0005629;2.46e-08;2!UBERON:0005358;2.46e-08;2!UBERON:0001886;2.46e-08;2!UBERON:0004086;2.46e-08;2!UBERON:0005282;2.46e-08;2!UBERON:0005281;2.46e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.87e-09,2;UBERON:0005629,1.19e-08,2;UBERON:0005358,1.19e-08,2;UBERON:0001886,1.19e-08,2;UBERON:0004086,1.19e-08,2;UBERON:0005282,1.19e-08,2;UBERON:0005281,1.19e-08,2;UBERON:0002097,6.13e-07,41 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.845726424575827,3.00219895059391,0,2.61701557230111,0,0,0,0,0,1.31064823278103,0.791300934685361,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.199441925932,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,4.7717156823066,22.3852040339212,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,1.98613771219828,3.15520282823695,0.709336764396714,0.560677600142307,3.20246987189115,0.24666754841716,0.622422070799533,0.269421344139376,0.163461903113459,1.96764655938411,2.88087962239999,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0.161872944368132,0.421352420106746,0,0,0.413303124703062,0,0.741800787835671,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0.751190294532984,0.453728732640084,1.79389635688862,1.2813443329114,2.11931901159562,0.600182192168805,0.824420233907511,1.28820270022815,1.11670113798954,0.675105328965065,0.876933046450788,2.52433774244115,0.460249493211497,0.646584227275248,1.77504796258307,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,1.00789276919316,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0.1466765716419,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,1.14861935834114,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0.713715955188647,0.473107245101804,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.737476674166813,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0,0,1.66435439510497,0.907170879989041,0.744323423456331,1.84154367945675,1.12264037773229,0.768834895534206,2.04682899626681,1.12597744800525,2.96836132889982,0.154209693802656,0.177561725313127,0.328508624055237,0,0.232420756919918,0,1.40354529212299,0,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.290033387828457,0.255679882248303,0,0.495854746082934,0.384380134730212,1.65896526242959,0.50578890427775,0.464845549297286,2.51849877464512,0,0,0,0,0.74129687641568,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,2.35484592059769,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0.141405431953713,1.13008116620243,0,0,0.438450885253763,1.73632660280006,1.31178950409327,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0.35667105148125,0,0,0.658589785919804,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,0.614321404198464,0,0,0.890469640183247,0,0,0.597743964753209,0,0,0,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,10.5270382711533,0.915975934018623,34.1142256651926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,3.24269895188163,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0.554805861502613,0.757612021100357,1.0062716070103,0,0.228840068396924,0.907385542579434,0.310874401165561,0.295710299979268,0,0.449803112163605,0.621051827505038,0.829412415681711,1.86089200190596,0.521745061811734,0,0.380805212168795,0.406870733204662,0.363697318405119,0.644463342254931,0.928067519756987,0.796191777397232,0,0,1.01024846629776,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0.786329709279482,0,0,0.212574920101683,0.247871528518004,0,1.27201740261367,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,1.3807198521202,0,0,3.42898616795984,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0.62164849248911,0.17071847709395,1.38251932362818,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,1.35941691750254,0,0,0,0,0.705789743431384,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.845726424575827,3.00219895059391,0,2.61701557230111,0,0,0,0,0,1.31064823278103,0.791300934685361,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.199441925932,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,4.7717156823066,22.3852040339212,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,1.98613771219828,3.15520282823695,0.709336764396714,0.560677600142307,3.20246987189115,0.24666754841716,0.622422070799533,0.269421344139376,0.163461903113459,1.96764655938411,2.88087962239999,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0.161872944368132,0.421352420106746,0,0,0.413303124703062,0,0.741800787835671,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0.751190294532984,0.453728732640084,1.79389635688862,1.2813443329114,2.11931901159562,0.600182192168805,0.824420233907511,1.28820270022815,1.11670113798954,0.675105328965065,0.876933046450788,2.52433774244115,0.460249493211497,0.646584227275248,1.77504796258307,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,1.00789276919316,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0.1466765716419,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,1.14861935834114,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0.713715955188647,0.473107245101804,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.737476674166813,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0,0,1.66435439510497,0.907170879989041,0.744323423456331,1.84154367945675,1.12264037773229,0.768834895534206,2.04682899626681,1.12597744800525,2.96836132889982,0.154209693802656,0.177561725313127,0.328508624055237,0,0.232420756919918,0,1.40354529212299,0,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.290033387828457,0.255679882248303,0,0.495854746082934,0.384380134730212,1.65896526242959,0.50578890427775,0.464845549297286,2.51849877464512,0,0,0,0,0.74129687641568,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,2.35484592059769,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0.141405431953713,1.13008116620243,0,0,0.438450885253763,1.73632660280006,1.31178950409327,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0.35667105148125,0,0,0.658589785919804,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,0.614321404198464,0,0,0.890469640183247,0,0,0.597743964753209,0,0,0,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,10.5270382711533,0.915975934018623,34.1142256651926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,3.24269895188163,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0.554805861502613,0.757612021100357,1.0062716070103,0,0.228840068396924,0.907385542579434,0.310874401165561,0.295710299979268,0,0.449803112163605,0.621051827505038,0.829412415681711,1.86089200190596,0.521745061811734,0,0.380805212168795,0.406870733204662,0.363697318405119,0.644463342254931,0.928067519756987,0.796191777397232,0,0,1.01024846629776,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0.786329709279482,0,0,0.212574920101683,0.247871528518004,0,1.27201740261367,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,1.3807198521202,0,0,3.42898616795984,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0.62164849248911,0.17071847709395,1.38251932362818,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,1.35941691750254,0,0,0,0,0.705789743431384,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p71@FN1 | |short_description=p71@FN1 | ||
}} | }} |
Latest revision as of 02:13, 20 September 2015
Short description: | p71@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_71_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 68bp_to_AK297733_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DN21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.82e-13 | 76 |
fibroblast of choroid plexus | 1.19e-08 | 2 |
smooth muscle cell of trachea | 4.35e-08 | 2 |
preadipocyte | 2.62e-07 | 12 |
skin fibroblast | 9.94e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.87e-09 | 2 |
vascular plexus | 1.19e-08 | 2 |
ventricle of nervous system | 1.19e-08 | 2 |
choroid plexus | 1.19e-08 | 2 |
brain ventricle | 1.19e-08 | 2 |
ventricular system of brain | 1.19e-08 | 2 |
ventricular system of central nervous system | 1.19e-08 | 2 |
skin of body | 6.13e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.39e-07 | 5 |
myotonic disease | 4.39e-07 | 5 |
muscle tissue disease | 4.39e-07 | 5 |
myopathy | 4.39e-07 | 5 |
muscular disease | 4.39e-07 | 5 |
myotonic dystrophy | 4.39e-07 | 5 |