FFCP PHASE1:Hg19::chr2:204400501..204400507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65059 | |EntrezGene=65059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14436 | |HGNC=14436 | ||
|TSSclassifier=strong | |||
|UniProt=Q70E73 | |UniProt=Q70E73 | ||
|association_with_transcript=-368bp_to_ENST00000319170_5end | |association_with_transcript=-368bp_to_ENST00000319170_5end | ||
|cluster_id=chr2:204400501..204400507,- | |||
|description=CAGE_peak_9_at_RAPH1_5end | |description=CAGE_peak_9_at_RAPH1_5end | ||
|id=chr2:204400501..204400507,- | |id=chr2:204400501..204400507,- | ||
|ontology_enrichment_celltype=CL:0002139!3.71e-13!24;CL:0000071!4.78e-12!18;CL:0002546!4.78e-12!18;CL:0000213!2.37e-08!57;CL:0000215!2.37e-08!57;CL:0000115!2.23e-07!35;CL:1000413!7.98e-07!9 | |ontology_enrichment_celltype=CL:0002139!3.71e-13!24;CL:0000071!4.78e-12!18;CL:0002546!4.78e-12!18;CL:0000213!2.37e-08!57;CL:0000215!2.37e-08!57;CL:0000115!2.23e-07!35;CL:1000413!7.98e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.03e-15;18!CL:0002139;1.50e-14;24!CL:0001014;1.07e-13;2!CL:0001016;1.07e-13;2!CL:0002144;1.05e-08;3!CL:0000115;8.85e-08;36!CL:0000511;3.84e-07;1!CL:0002625;3.84e-07;1!CL:0000216;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.04e-15,18;CL:0002546,2.04e-15,18;CL:0002139,8.73e-15,24;CL:0001014,1.08e-13,2;CL:0001016,1.08e-13,2;CL:0000115,1.84e-09,36;CL:0002144,9.40e-09,3;CL:0000511,2.37e-07,1;CL:0002625,2.37e-07,1;CL:0000216,2.37e-07,1;CL:0002078,2.47e-07,45;CL:0000213,7.04e-07,58;CL:0000215,7.04e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.03e-15;18!UBERON:0004872;5.01e-08;7!UBERON:0008801;3.84e-07;1!UBERON:0004140;3.84e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.78e-12!18;UBERON:0004638!4.78e-12!18;UBERON:0004852!4.78e-12!18;UBERON:0000487!1.04e-11!22;UBERON:0006914!1.84e-10!25;UBERON:0004872!1.02e-07!84;UBERON:0000468!2.12e-07!659;UBERON:0000025!2.26e-07!194;UBERON:0004111!3.35e-07!241;UBERON:0000477!7.88e-07!286;UBERON:0003915!7.98e-07!9;UBERON:0004700!7.98e-07!9;UBERON:0001917!7.98e-07!9 | |ontology_enrichment_uberon=UBERON:0001986!4.78e-12!18;UBERON:0004638!4.78e-12!18;UBERON:0004852!4.78e-12!18;UBERON:0000487!1.04e-11!22;UBERON:0006914!1.84e-10!25;UBERON:0004872!1.02e-07!84;UBERON:0000468!2.12e-07!659;UBERON:0000025!2.26e-07!194;UBERON:0004111!3.35e-07!241;UBERON:0000477!7.88e-07!286;UBERON:0003915!7.98e-07!9;UBERON:0004700!7.98e-07!9;UBERON:0001917!7.98e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;5.60e-16;22!UBERON:0004638;3.03e-15;18!UBERON:0001986;3.03e-15;18!UBERON:0004852;3.03e-15;18!UBERON:0006914;6.38e-14;25!UBERON:0000490;6.08e-13;33!UBERON:0002106;1.05e-08;3!UBERON:0010523;1.05e-08;3!UBERON:0001915;1.05e-08;3!UBERON:0001982;1.05e-08;3!UBERON:0001831;3.84e-07;1!UBERON:0001136;3.84e-07;1!UBERON:0001343;3.84e-07;1!UBERON:0004910;3.84e-07;1!UBERON:0004813;3.84e-07;1!UBERON:0001567;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,3.29e-16,22;UBERON:0004638,2.04e-15,18;UBERON:0001986,2.04e-15,18;UBERON:0004852,2.04e-15,18;UBERON:0006914,4.01e-14,25;UBERON:0010523,9.40e-09,3;UBERON:0001915,9.40e-09,3;UBERON:0001982,9.40e-09,3;UBERON:0002106,1.24e-08,3;UBERON:0004854,1.24e-08,3;UBERON:0009034,1.24e-08,3;UBERON:0002095,1.24e-08,3;UBERON:0004782,1.24e-08,3;UBERON:0003281,1.24e-08,3;UBERON:0009664,1.24e-08,3;UBERON:0002296,1.24e-08,3;UBERON:0005602,1.24e-08,3;UBERON:0001179,1.24e-08,3;UBERON:0006293,1.24e-08,3;UBERON:0004872,6.15e-08,83;UBERON:0001136,2.37e-07,1;UBERON:0001343,2.37e-07,1;UBERON:0004910,2.37e-07,1;UBERON:0005154,2.37e-07,1;UBERON:0005295,2.37e-07,1;UBERON:0004813,2.37e-07,1;UBERON:0005297,2.37e-07,1;UBERON:0005294,2.37e-07,1;UBERON:0010141,2.37e-07,1;UBERON:0005891,2.37e-07,1;UBERON:0001831,5.84e-07,1;UBERON:0001567,5.84e-07,1;UBERON:0008801,5.84e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.973269740605272,0.567208902984407,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,2.26123176769604,0.838998872419812,0,1.25396979922086,0.516833518338658,0,0,1.20848795132744,1.52054421143703,0.732186172644509,0.735326160691737,1.62028389576352,0.446498641420399,0,0.450445921933289,1.53316637465883,2.84779697870439,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0.794455084879313,0,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0.269421344139376,0.490385709340376,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,1.15424147083917,0,0,0,0,11.4079531339648,0.982827216677626,2.36315962672562,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0.721832238805369,1.85194205030644,0.570762456703795,0,3.43394464837949,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.899756920638513,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0,0,0.246381468041427,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0.247528499761764,0,0,1.6068392984416,0,0.154048617114644,0,0,0.322260734604821,0,0,0.267096106940212,0,0,0.382838137483752,0.10115778085555,0,0.94443704049192,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0.235624804691373,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0.398495976502139,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.174919999992391,0.724999575434793,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.83758992864123,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.485560759068186,0.789168805698781,0,0,0.31593289814244,0.300646838828985,0,0,0,0.313932918407225,0,0,0.138674673013139,0.347119476670262,0,0,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.617792886840502,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0.343609788497747,0,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0,0,1.2764859772478,0,0,0.393915911536118,0.247247575143499,0.404421263125109,0,0,0,0,0.482259445395058,0.412618309791701,0.415440338029185,7.19916452964801,4.6428117273477,0.0607495566580247,0,0.157611414598396,0.419636705079985,0.105600336519406,0.179287339332845,0.191915197319445,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0.339936274560377,1.02586563574658,3.97520666736664,0.129282956361551,0.13223260174269,0.684347351537318,0,0.106787412567695,1.41483874589699,0,0,0,0,0,1.08803560673895,1.5041393641362,0.919036730290385,0.327872630709804,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,2.28483127301277,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0.489473409012935,0.179088841081487,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.779441235357554,0.398594520940089,0.163565394255844,0,0.491545817507439,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,0,0.159633859057151,0,0.252071696221718,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| ||
|short_description=p9@RAPH1 | |short_description=p9@RAPH1 | ||
}} | }} |
Latest revision as of 15:58, 19 September 2015
Short description: | p9@RAPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RAPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -368bp_to_ENST00000319170_5end |
EntrezGene: | RAPH1 |
HGNC: | 14436 |
UniProt: | Q70E73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.04e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.04e-15 | 18 |
endothelial cell of vascular tree | 8.73e-15 | 24 |
CD1a-positive Langerhans cell | 1.08e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.08e-13 | 2 |
endothelial cell | 1.84e-09 | 36 |
capillary endothelial cell | 9.40e-09 | 3 |
androgen binding protein secreting cell | 2.37e-07 | 1 |
seminiferous tubule epithelial cell | 2.37e-07 | 1 |
Sertoli cell | 2.37e-07 | 1 |
meso-epithelial cell | 2.47e-07 | 45 |
lining cell | 7.04e-07 | 58 |
barrier cell | 7.04e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 3.29e-16 | 22 |
blood vessel endothelium | 2.04e-15 | 18 |
endothelium | 2.04e-15 | 18 |
cardiovascular system endothelium | 2.04e-15 | 18 |
squamous epithelium | 4.01e-14 | 25 |
microcirculatory vessel | 9.40e-09 | 3 |
endothelium of capillary | 9.40e-09 | 3 |
capillary | 9.40e-09 | 3 |
spleen | 1.24e-08 | 3 |
gastrointestinal system mesentery | 1.24e-08 | 3 |
stomach region | 1.24e-08 | 3 |
mesentery | 1.24e-08 | 3 |
gastrointestinal system serosa | 1.24e-08 | 3 |
mesentery of stomach | 1.24e-08 | 3 |
gut mesentery | 1.24e-08 | 3 |
dorsal mesentery | 1.24e-08 | 3 |
dorsal mesogastrium | 1.24e-08 | 3 |
peritoneal cavity | 1.24e-08 | 3 |
spleen primordium | 1.24e-08 | 3 |
splanchnic layer of lateral plate mesoderm | 6.15e-08 | 83 |
mesothelium | 2.37e-07 | 1 |
seminiferous tubule of testis | 2.37e-07 | 1 |
epithelium of male gonad | 2.37e-07 | 1 |
epithelial cord | 2.37e-07 | 1 |
sex cord | 2.37e-07 | 1 |
seminiferous tubule epithelium | 2.37e-07 | 1 |
testis sex cord | 2.37e-07 | 1 |
genital ridge | 2.37e-07 | 1 |
primitive sex cord of indifferent gonad | 2.37e-07 | 1 |
coelomic epithelium | 2.37e-07 | 1 |
parotid gland | 5.84e-07 | 1 |
cheek | 5.84e-07 | 1 |
parotid gland primordium | 5.84e-07 | 1 |