FFCP PHASE1:Hg19::chr2:202562774..202562794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt=E9PG92,F6Q0Y6 | |UniProt=E9PG92,F6Q0Y6 | ||
|association_with_transcript=0bp_to_ENST00000396886,ENST00000409143,uc002uyj.3,uc010zhr.1,uc010zhs.1,uc010zht.1_5end | |association_with_transcript=0bp_to_ENST00000396886,ENST00000409143,uc002uyj.3,uc010zhr.1,uc010zhs.1,uc010zht.1_5end | ||
|cluster_id=chr2:202562774..202562794,- | |||
|description=CAGE_peak_2_at_MPP4_5end | |description=CAGE_peak_2_at_MPP4_5end | ||
|id=chr2:202562774..202562794,- | |id=chr2:202562774..202562794,- | ||
|ontology_enrichment_celltype=CL:0000055!2.68e-38!180;CL:0000680!1.15e-23!57;CL:0000056!1.15e-23!57;CL:0000355!1.15e-23!57;CL:0000222!2.21e-22!119;CL:0000183!4.30e-22!59;CL:0000187!3.35e-21!54;CL:0000359!3.36e-19!32;CL:0000192!2.59e-18!42;CL:0000514!2.59e-18!42;CL:0000393!3.82e-18!60;CL:0000211!3.82e-18!60;CL:0002371!4.87e-17!591;CL:0000057!9.44e-17!75;CL:0000144!3.42e-15!625;CL:0000220!5.88e-13!246;CL:0002321!1.36e-12!248;CL:0002620!3.59e-12!23;CL:0000048!1.16e-11!430;CL:0000723!3.66e-11!436;CL:0000548!1.04e-10!679;CL:0000004!1.04e-10!679;CL:0000255!1.04e-10!679;CL:0000012!2.35e-10!682;CL:0000034!3.71e-10!444;CL:0002139!7.09e-10!24;CL:0002539!2.37e-09!10;CL:0000071!3.57e-08!18;CL:0002546!3.57e-08!18;CL:0000115!8.85e-08!35;CL:1000413!1.82e-07!9 | |ontology_enrichment_celltype=CL:0000055!2.68e-38!180;CL:0000680!1.15e-23!57;CL:0000056!1.15e-23!57;CL:0000355!1.15e-23!57;CL:0000222!2.21e-22!119;CL:0000183!4.30e-22!59;CL:0000187!3.35e-21!54;CL:0000359!3.36e-19!32;CL:0000192!2.59e-18!42;CL:0000514!2.59e-18!42;CL:0000393!3.82e-18!60;CL:0000211!3.82e-18!60;CL:0002371!4.87e-17!591;CL:0000057!9.44e-17!75;CL:0000144!3.42e-15!625;CL:0000220!5.88e-13!246;CL:0002321!1.36e-12!248;CL:0002620!3.59e-12!23;CL:0000048!1.16e-11!430;CL:0000723!3.66e-11!436;CL:0000548!1.04e-10!679;CL:0000004!1.04e-10!679;CL:0000255!1.04e-10!679;CL:0000012!2.35e-10!682;CL:0000034!3.71e-10!444;CL:0002139!7.09e-10!24;CL:0002539!2.37e-09!10;CL:0000071!3.57e-08!18;CL:0002546!3.57e-08!18;CL:0000115!8.85e-08!35;CL:1000413!1.82e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.99e-22;32!CL:0000192;1.28e-15;43!CL:0002539;2.67e-15;10!CL:0000187;3.11e-10;55!CL:0000393;3.53e-08;61!CL:0000211;3.53e-08;61!CL:1000413;6.07e-08;9!CL:0000056;1.25e-07;4!CL:0002620;3.00e-07;23!CL:0002139;3.93e-07;24!CL:0002594;4.20e-07;4!CL:0000071;6.80e-07;18!CL:0002544;6.99e-07;6!CL:0000708;7.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.09e-23,32;CL:0000680,2.80e-23,58;CL:0000056,2.80e-23,58;CL:0000355,2.80e-23,58;CL:0000192,3.00e-20,43;CL:0000514,3.00e-20,43;CL:0000187,1.07e-19,55;CL:0000222,2.24e-18,121;CL:0000393,7.61e-17,61;CL:0000211,7.61e-17,61;CL:0002539,1.94e-15,10;CL:0000048,7.54e-11,427;CL:0000723,2.24e-10,433;CL:0000034,9.08e-10,441;CL:0000057,7.52e-09,76;CL:1000413,4.68e-08,9;CL:0000515,1.63e-07,4;CL:0002594,1.86e-07,4;CL:0002321,2.60e-07,250;CL:0002620,3.41e-07,23;CL:0002139,3.50e-07,24;CL:0002544,4.86e-07,6;CL:0000071,5.24e-07,18;CL:0002546,5.24e-07,18;CL:0002556,5.26e-07,6;CL:0000708,7.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-15;43!CL:0000355;1.72e-11;58!CL:0000515;1.25e-07;4!CL:0002546;6.80e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!4.86e-07!14 | |ontology_enrichment_disease=DOID:2394!4.86e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.54e-30!83;UBERON:0002329!5.54e-30!83;UBERON:0003077!5.54e-30!83;UBERON:0003059!5.54e-30!83;UBERON:0007282!5.54e-30!83;UBERON:0009618!5.54e-30!83;UBERON:0007285!5.54e-30!83;UBERON:0002049!7.35e-28!79;UBERON:0007798!7.35e-28!79;UBERON:0001981!1.57e-24!60;UBERON:0007500!1.57e-24!60;UBERON:0004537!1.57e-24!60;UBERON:0006965!1.57e-24!60;UBERON:0004290!1.87e-24!70;UBERON:0000055!2.68e-24!69;UBERON:0001637!2.58e-23!42;UBERON:0003509!2.58e-23!42;UBERON:0004572!2.58e-23!42;UBERON:0004872!1.49e-22!84;UBERON:0000486!3.77e-21!82;UBERON:0001134!7.13e-21!61;UBERON:0002036!7.13e-21!61;UBERON:0003082!7.13e-21!61;UBERON:0004535!2.39e-20!110;UBERON:0002385!1.27e-19!63;UBERON:0001015!1.27e-19!63;UBERON:0000383!1.27e-19!63;UBERON:0001009!3.88e-19!113;UBERON:0005256!1.61e-18!143;UBERON:0000490!1.91e-18!138;UBERON:0004573!3.41e-17!33;UBERON:0004571!3.41e-17!33;UBERON:0003914!7.60e-15!118;UBERON:0000947!4.10e-13!21;UBERON:0010191!4.10e-13!21;UBERON:0002100!5.29e-12!216;UBERON:0000475!1.19e-10!365;UBERON:0004237!2.37e-09!10;UBERON:0004695!2.37e-09!10;UBERON:0002111!2.37e-09!10;UBERON:0004178!2.37e-09!10;UBERON:0002199!2.50e-09!45;UBERON:0002416!2.50e-09!45;UBERON:0000119!2.58e-09!312;UBERON:0002097!1.15e-08!40;UBERON:0003102!2.35e-08!95;UBERON:0000483!3.00e-08!309;UBERON:0001986!3.57e-08!18;UBERON:0004638!3.57e-08!18;UBERON:0004852!3.57e-08!18;UBERON:0001135!9.74e-08!15;UBERON:0003915!1.82e-07!9;UBERON:0004700!1.82e-07!9;UBERON:0001917!1.82e-07!9;UBERON:0003104!3.73e-07!238;UBERON:0009142!3.73e-07!238;UBERON:0000487!6.76e-07!22;UBERON:0000477!9.68e-07!286 | |ontology_enrichment_uberon=UBERON:0000914!5.54e-30!83;UBERON:0002329!5.54e-30!83;UBERON:0003077!5.54e-30!83;UBERON:0003059!5.54e-30!83;UBERON:0007282!5.54e-30!83;UBERON:0009618!5.54e-30!83;UBERON:0007285!5.54e-30!83;UBERON:0002049!7.35e-28!79;UBERON:0007798!7.35e-28!79;UBERON:0001981!1.57e-24!60;UBERON:0007500!1.57e-24!60;UBERON:0004537!1.57e-24!60;UBERON:0006965!1.57e-24!60;UBERON:0004290!1.87e-24!70;UBERON:0000055!2.68e-24!69;UBERON:0001637!2.58e-23!42;UBERON:0003509!2.58e-23!42;UBERON:0004572!2.58e-23!42;UBERON:0004872!1.49e-22!84;UBERON:0000486!3.77e-21!82;UBERON:0001134!7.13e-21!61;UBERON:0002036!7.13e-21!61;UBERON:0003082!7.13e-21!61;UBERON:0004535!2.39e-20!110;UBERON:0002385!1.27e-19!63;UBERON:0001015!1.27e-19!63;UBERON:0000383!1.27e-19!63;UBERON:0001009!3.88e-19!113;UBERON:0005256!1.61e-18!143;UBERON:0000490!1.91e-18!138;UBERON:0004573!3.41e-17!33;UBERON:0004571!3.41e-17!33;UBERON:0003914!7.60e-15!118;UBERON:0000947!4.10e-13!21;UBERON:0010191!4.10e-13!21;UBERON:0002100!5.29e-12!216;UBERON:0000475!1.19e-10!365;UBERON:0004237!2.37e-09!10;UBERON:0004695!2.37e-09!10;UBERON:0002111!2.37e-09!10;UBERON:0004178!2.37e-09!10;UBERON:0002199!2.50e-09!45;UBERON:0002416!2.50e-09!45;UBERON:0000119!2.58e-09!312;UBERON:0002097!1.15e-08!40;UBERON:0003102!2.35e-08!95;UBERON:0000483!3.00e-08!309;UBERON:0001986!3.57e-08!18;UBERON:0004638!3.57e-08!18;UBERON:0004852!3.57e-08!18;UBERON:0001135!9.74e-08!15;UBERON:0003915!1.82e-07!9;UBERON:0004700!1.82e-07!9;UBERON:0001917!1.82e-07!9;UBERON:0003104!3.73e-07!238;UBERON:0009142!3.73e-07!238;UBERON:0000487!6.76e-07!22;UBERON:0000477!9.68e-07!286 | ||
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| ||
|short_description=p2@MPP4 | |short_description=p2@MPP4 | ||
}} | }} |
Latest revision as of 13:51, 19 September 2015
Short description: | p2@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396886, ENST00000409143, uc002uyj.3, uc010zhr.1, uc010zhs.1, uc010zht.1_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | E9PG92F6Q0Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.09e-23 | 32 |
muscle precursor cell | 2.80e-23 | 58 |
myoblast | 2.80e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-23 | 58 |
smooth muscle cell | 3.00e-20 | 43 |
smooth muscle myoblast | 3.00e-20 | 43 |
muscle cell | 1.07e-19 | 55 |
mesodermal cell | 2.24e-18 | 121 |
electrically responsive cell | 7.61e-17 | 61 |
electrically active cell | 7.61e-17 | 61 |
aortic smooth muscle cell | 1.94e-15 | 10 |
multi fate stem cell | 7.54e-11 | 427 |
somatic stem cell | 2.24e-10 | 433 |
stem cell | 9.08e-10 | 441 |
fibroblast | 7.52e-09 | 76 |
endothelial cell of artery | 4.68e-08 | 9 |
skeletal muscle myoblast | 1.63e-07 | 4 |
smooth muscle cell of the umbilical artery | 1.86e-07 | 4 |
embryonic cell | 2.60e-07 | 250 |
skin fibroblast | 3.41e-07 | 23 |
endothelial cell of vascular tree | 3.50e-07 | 24 |
aortic endothelial cell | 4.86e-07 | 6 |
blood vessel endothelial cell | 5.24e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.24e-07 | 18 |
fibroblast of periodontium | 5.26e-07 | 6 |
leptomeningeal cell | 7.82e-07 | 3 |