FFCP PHASE1:Hg19::chr2:201474053..201474088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=316 | |EntrezGene=316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=553 | |HGNC=553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_ENST00000485106_5end | |association_with_transcript=87bp_to_ENST00000485106_5end | ||
|cluster_id=chr2:201474053..201474088,+ | |||
|description=CAGE_peak_3_at_AOX1_5end | |description=CAGE_peak_3_at_AOX1_5end | ||
|id=chr2:201474053..201474088,+ | |id=chr2:201474053..201474088,+ | ||
|ontology_enrichment_celltype=CL:0000057!6.51e-19!75;CL:0000055!1.96e-17!180;CL:0002620!4.64e-13!23;CL:0000136!2.10e-08!15 | |ontology_enrichment_celltype=CL:0000057!6.51e-19!75;CL:0000055!1.96e-17!180;CL:0002620!4.64e-13!23;CL:0000136!2.10e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-17;23!CL:0002551;2.63e-12;6!CL:0000680;1.78e-10;7!CL:0000136;2.57e-09;13!CL:0000515;9.39e-08;3!CL:0000057;2.67e-07;73!CL:0002615;3.07e-07;3!CL:0000188;5.57e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.51e-17,23;CL:0000057,2.93e-16,76;CL:0002551,3.03e-12,6;CL:0000048,1.12e-10,427;CL:0000723,2.97e-10,433;CL:0000136,8.80e-10,15;CL:0000034,1.04e-09,441;CL:0002320,3.39e-07,361;CL:0000134,3.45e-07,354;CL:0002615,3.68e-07,3;CL:0000188,4.87e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.18e-11!95;UBERON:0002199!8.29e-10!45;UBERON:0002416!8.29e-10!45;UBERON:0002097!4.87e-09!40;UBERON:0000914!1.33e-08!83;UBERON:0002329!1.33e-08!83;UBERON:0003077!1.33e-08!83;UBERON:0003059!1.33e-08!83;UBERON:0007282!1.33e-08!83;UBERON:0009618!1.33e-08!83;UBERON:0007285!1.33e-08!83;UBERON:0000486!5.19e-08!82;UBERON:0004290!2.17e-07!70 | |ontology_enrichment_uberon=UBERON:0003102!4.18e-11!95;UBERON:0002199!8.29e-10!45;UBERON:0002416!8.29e-10!45;UBERON:0002097!4.87e-09!40;UBERON:0000914!1.33e-08!83;UBERON:0002329!1.33e-08!83;UBERON:0003077!1.33e-08!83;UBERON:0003059!1.33e-08!83;UBERON:0007282!1.33e-08!83;UBERON:0009618!1.33e-08!83;UBERON:0007285!1.33e-08!83;UBERON:0000486!5.19e-08!82;UBERON:0004290!2.17e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.43e-14;9!UBERON:0000042;4.43e-14;9!UBERON:0003688;5.03e-12;6!UBERON:0002358;5.03e-12;6!UBERON:0003684;5.03e-12;6!UBERON:0001178;5.03e-12;6!UBERON:0002097;1.36e-10;41!UBERON:0002067;2.42e-10;9!UBERON:0002199;5.30e-10;46!UBERON:0002416;5.30e-10;46!UBERON:0001134;1.29e-08;16!UBERON:0002036;1.29e-08;16!UBERON:0003102;4.19e-08;50!UBERON:0001013;1.87e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.93e-14,46;UBERON:0002416,1.93e-14,46;UBERON:0002097,1.74e-13,41;UBERON:0003688,4.67e-12,6;UBERON:0002358,4.67e-12,6;UBERON:0003684,4.67e-12,6;UBERON:0001178,4.67e-12,6;UBERON:0002067,2.77e-10,9;UBERON:0004016,2.77e-10,9;UBERON:0010083,2.77e-10,9;UBERON:0004457,3.85e-10,12;UBERON:0000042,3.85e-10,12;UBERON:0003102,2.49e-09,99;UBERON:0000486,4.72e-09,83;UBERON:0002329,1.70e-08,71;UBERON:0003059,1.70e-08,71;UBERON:0007282,1.70e-08,71;UBERON:0004290,1.70e-08,71;UBERON:0009618,1.70e-08,71;UBERON:0003077,2.69e-08,72;UBERON:0007285,2.69e-08,72;UBERON:0007524,4.18e-08,73;UBERON:0002384,4.44e-08,371;UBERON:0001013,9.20e-08,14;UBERON:0007503,3.17e-07,78 | |||
|phase1_expression=2.72517568905835,6.85121676451146,4.36958652697511,5.00366491765652,3.12872766099101,4.36169262050184,0,4.42203911398782,2.35067065379855,0,0,0,0,0.866364470720326,0,0,1.20538905604795,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,1.44575660953827,2.50668955317945,2.02785126545153,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.01304409331664,1.58891016975863,0,0,0.560677600142307,0,0.24666754841716,0.933633106199299,0.538842688278752,0.163461903113459,0.302714855289863,0,0,2.18512053781224,5.13424639390004,3.58676833324323,2.23125547423153,4.04682360920329,3.23036855415172,4.49139176760765,0.859840221182376,0.826606249406124,0,0.741800787835671,0,0,0.841680569770331,1.37630371859161,4.98715407871529,0,1.5324389789951,1.80285670687916,0.567160915800105,0.89694817844431,3.20336083227851,3.17897851739343,0,1.13357782162283,1.28820270022815,1.30281799432113,0.506328996723799,0,1.26216887122057,5.33889412125336,0.484938170456436,0.355009592516614,1.0075209822764,1.01736355386293,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,1.28648187638577,0,18.5747171212792,9.38443326170461,0.354920400119532,0,0.241011029883482,0.441175890929576,0,0.474541238222193,0.134831308160164,0.588664395376038,0,0,0,0,0,8.87285243752816,5.89696330006576,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.721832238805369,0,0,0,0,0,0,0,0,0.503946384596579,0,0.447792613514241,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.560655421726804,0,4.2536205776151,0.129271715757778,0,2.535908257668,0.26593811658487,3.12022310734098,0.257207374262142,0,0.799266537048298,0,0,0.823240336780769,1.95441710576241,0.355391948742546,2.37585561880029,8.741741934728,6.10073421020206,4.59875759437462,0,0,0,1.67737398844108,0,0,21.8619773068045,10.0683398049688,6.44619467663624,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,1.35632511849868,1.03985430765404,1.07057393278297,0.473107245101804,0.819989904948992,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,1.24053903909388,0.767309866440312,0.280660094433074,2.05022638809122,3.58195074346692,1.60853921143608,1.48418066444991,0,0.710246901252508,0.164254312027618,0.519254429183621,0.232420756919918,0,0.601519410909855,0.184161977871793,0.229628896329213,0,0,0,0.308061348417659,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.412164046590889,0,0,0.574265537996172,0,3.21367859688319,0.096670718292122,1.54048617114644,1.22802939780904,3.85942402956686,1.50388342815583,2.32026710262766,2.04543905798642,0,0.330569830721956,0.384380134730212,1.02090169995667,0.10115778085555,0,0.94443704049192,0.6970372701606,1.23213432070436,0.532306030317022,0,0.18532421910392,1.71749864090389,0,0.949138274156178,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0,0,2.92456187557541,0,0.272999822815972,0,1.13008116620243,0,5.30751180192976,4.82295973779139,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,13.2997810237528,8.23237232399755,0.379473173765715,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.597743964753209,0.276283915531148,0,0.409074730008619,0,2.17727711363265,0,0,0,0.0986434056369336,0,32.2297271419447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0.34945333648406,0.171986032471617,0.580537987734511,0.292357268344742,0.739039113478883,0.0969890164884194,0,0,0.274083849293502,0.397429223405979,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.472834243795189,0.104909176269996,0,0,0,0.714695326373367,0,0,2.71499800876856,0.864221491201268,0.653174720218818,0,0,0,0,0.732761168390412,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.74627401443437,0.467426619694449,0,3.4092540949516,5.53449383855665,11.567545880755,0.228840068396924,1.05861646634267,0.310874401165561,0.147855149989634,1.27437413730962,0.449803112163605,0.310525913752519,1.24411862352257,0.265841714557995,0,0.450772826991655,2.66563648518157,1.22061219961398,0.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|phase1_expression=2.72517568905835,6.85121676451146,4.36958652697511,5.00366491765652,3.12872766099101,4.36169262050184,0,4.42203911398782,2.35067065379855,0,0,0,0,0.866364470720326,0,0,1.20538905604795,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,1.44575660953827,2.50668955317945,2.02785126545153,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.01304409331664,1.58891016975863,0,0,0.560677600142307,0,0.24666754841716,0.933633106199299,0.538842688278752,0.163461903113459,0.302714855289863,0,0,2.18512053781224,5.13424639390004,3.58676833324323,2.23125547423153,4.04682360920329,3.23036855415172,4.49139176760765,0.859840221182376,0.826606249406124,0,0.741800787835671,0,0,0.841680569770331,1.37630371859161,4.98715407871529,0,1.5324389789951,1.80285670687916,0.567160915800105,0.89694817844431,3.20336083227851,3.17897851739343,0,1.13357782162283,1.28820270022815,1.30281799432113,0.506328996723799,0,1.26216887122057,5.33889412125336,0.484938170456436,0.355009592516614,1.0075209822764,1.01736355386293,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,1.28648187638577,0,18.5747171212792,9.38443326170461,0.354920400119532,0,0.241011029883482,0.441175890929576,0,0.474541238222193,0.134831308160164,0.588664395376038,0,0,0,0,0,8.87285243752816,5.89696330006576,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.721832238805369,0,0,0,0,0,0,0,0,0.503946384596579,0,0.447792613514241,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.560655421726804,0,4.2536205776151,0.129271715757778,0,2.535908257668,0.26593811658487,3.12022310734098,0.257207374262142,0,0.799266537048298,0,0,0.823240336780769,1.95441710576241,0.355391948742546,2.37585561880029,8.741741934728,6.10073421020206,4.59875759437462,0,0,0,1.67737398844108,0,0,21.8619773068045,10.0683398049688,6.44619467663624,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,1.35632511849868,1.03985430765404,1.07057393278297,0.473107245101804,0.819989904948992,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,1.24053903909388,0.767309866440312,0.280660094433074,2.05022638809122,3.58195074346692,1.60853921143608,1.48418066444991,0,0.710246901252508,0.164254312027618,0.519254429183621,0.232420756919918,0,0.601519410909855,0.184161977871793,0.229628896329213,0,0,0,0.308061348417659,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.412164046590889,0,0,0.574265537996172,0,3.21367859688319,0.096670718292122,1.54048617114644,1.22802939780904,3.85942402956686,1.50388342815583,2.32026710262766,2.04543905798642,0,0.330569830721956,0.384380134730212,1.02090169995667,0.10115778085555,0,0.94443704049192,0.6970372701606,1.23213432070436,0.532306030317022,0,0.18532421910392,1.71749864090389,0,0.949138274156178,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0,0,2.92456187557541,0,0.272999822815972,0,1.13008116620243,0,5.30751180192976,4.82295973779139,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,13.2997810237528,8.23237232399755,0.379473173765715,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.597743964753209,0.276283915531148,0,0.409074730008619,0,2.17727711363265,0,0,0,0.0986434056369336,0,32.2297271419447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0.34945333648406,0.171986032471617,0.580537987734511,0.292357268344742,0.739039113478883,0.0969890164884194,0,0,0.274083849293502,0.397429223405979,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.472834243795189,0.104909176269996,0,0,0,0.714695326373367,0,0,2.71499800876856,0.864221491201268,0.653174720218818,0,0,0,0,0.732761168390412,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.74627401443437,0.467426619694449,0,3.4092540949516,5.53449383855665,11.567545880755,0.228840068396924,1.05861646634267,0.310874401165561,0.147855149989634,1.27437413730962,0.449803112163605,0.310525913752519,1.24411862352257,0.265841714557995,0,0.450772826991655,2.66563648518157,1.22061219961398,0.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| ||
|short_description=p3@AOX1 | |short_description=p3@AOX1 | ||
}} | }} |
Latest revision as of 10:44, 19 September 2015
Short description: | p3@AOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_ENST00000485106_5end |
EntrezGene: | AOX1 |
HGNC: | 553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.51e-17 | 23 |
fibroblast | 2.93e-16 | 76 |
fibroblast of dermis | 3.03e-12 | 6 |
multi fate stem cell | 1.12e-10 | 427 |
somatic stem cell | 2.97e-10 | 433 |
fat cell | 8.80e-10 | 15 |
stem cell | 1.04e-09 | 441 |
connective tissue cell | 3.39e-07 | 361 |
mesenchymal cell | 3.45e-07 | 354 |
adipocyte of omentum tissue | 3.68e-07 | 3 |
cell of skeletal muscle | 4.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
integument | 1.93e-14 | 46 |
integumental system | 1.93e-14 | 46 |
skin of body | 1.74e-13 | 41 |
omentum | 4.67e-12 | 6 |
peritoneum | 4.67e-12 | 6 |
abdominal cavity | 4.67e-12 | 6 |
visceral peritoneum | 4.67e-12 | 6 |
dermis | 2.77e-10 | 9 |
dermatome | 2.77e-10 | 9 |
future dermis | 2.77e-10 | 9 |
cavity lining | 3.85e-10 | 12 |
serous membrane | 3.85e-10 | 12 |
surface structure | 2.49e-09 | 99 |
multilaminar epithelium | 4.72e-09 | 83 |
somite | 1.70e-08 | 71 |
presomitic mesoderm | 1.70e-08 | 71 |
presumptive segmental plate | 1.70e-08 | 71 |
dermomyotome | 1.70e-08 | 71 |
trunk paraxial mesoderm | 1.70e-08 | 71 |
paraxial mesoderm | 2.69e-08 | 72 |
presumptive paraxial mesoderm | 2.69e-08 | 72 |
dense mesenchyme tissue | 4.18e-08 | 73 |
connective tissue | 4.44e-08 | 371 |
adipose tissue | 9.20e-08 | 14 |
epithelial vesicle | 3.17e-07 | 78 |