FFCP PHASE1:Hg19::chr2:201473952..201473998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=316 | |EntrezGene=316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=553 | |HGNC=553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485106_5end | |association_with_transcript=0bp_to_ENST00000485106_5end | ||
|cluster_id=chr2:201473952..201473998,+ | |||
|description=CAGE_peak_2_at_AOX1_5end | |description=CAGE_peak_2_at_AOX1_5end | ||
|id=chr2:201473952..201473998,+ | |id=chr2:201473952..201473998,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.94e-31!180;CL:0000057!3.98e-20!75;CL:0000548!9.49e-19!679;CL:0000004!9.49e-19!679;CL:0000255!9.49e-19!679;CL:0000012!3.64e-18!682;CL:0000680!4.14e-17!57;CL:0000056!4.14e-17!57;CL:0000355!4.14e-17!57;CL:0000144!1.79e-16!625;CL:0000220!5.20e-16!246;CL:0002321!1.65e-15!248;CL:0000187!2.86e-15!54;CL:0002371!4.78e-15!591;CL:0000192!4.61e-14!42;CL:0000514!4.61e-14!42;CL:0000222!6.10e-14!119;CL:0000359!6.28e-14!32;CL:0000183!5.45e-13!59;CL:0002620!6.23e-13!23;CL:0000393!6.29e-12!60;CL:0000211!6.29e-12!60;CL:0000003!1.09e-11!722;CL:0000723!5.05e-07!436;CL:0002539!6.90e-07!10 | |ontology_enrichment_celltype=CL:0000055!3.94e-31!180;CL:0000057!3.98e-20!75;CL:0000548!9.49e-19!679;CL:0000004!9.49e-19!679;CL:0000255!9.49e-19!679;CL:0000012!3.64e-18!682;CL:0000680!4.14e-17!57;CL:0000056!4.14e-17!57;CL:0000355!4.14e-17!57;CL:0000144!1.79e-16!625;CL:0000220!5.20e-16!246;CL:0002321!1.65e-15!248;CL:0000187!2.86e-15!54;CL:0002371!4.78e-15!591;CL:0000192!4.61e-14!42;CL:0000514!4.61e-14!42;CL:0000222!6.10e-14!119;CL:0000359!6.28e-14!32;CL:0000183!5.45e-13!59;CL:0002620!6.23e-13!23;CL:0000393!6.29e-12!60;CL:0000211!6.29e-12!60;CL:0000003!1.09e-11!722;CL:0000723!5.05e-07!436;CL:0002539!6.90e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.25e-14;23!CL:0000359;3.70e-14;32!CL:0000192;4.12e-11;43!CL:0000187;1.16e-08;55!CL:0002539;1.20e-08;10!CL:0000057;4.64e-08;73!CL:0002551;2.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.08e-18,76;CL:0000680,4.80e-16,58;CL:0000056,4.80e-16,58;CL:0000355,4.80e-16,58;CL:0000359,7.21e-15,32;CL:0002620,3.07e-14,23;CL:0000187,7.19e-14,55;CL:0000192,3.15e-13,43;CL:0000514,3.15e-13,43;CL:0000393,2.46e-11,61;CL:0000211,2.46e-11,61;CL:0000222,3.97e-11,121;CL:0002321,5.94e-11,250;CL:0002539,1.05e-08,10;CL:0000723,2.79e-08,433;CL:0000034,1.60e-07,441;CL:0000048,1.65e-07,427;CL:0002551,2.88e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;4.12e-11;43!CL:0000355;5.84e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!1.11e-08!14 | |ontology_enrichment_disease=DOID:2394!1.11e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.84e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.18e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.45e-25!83;UBERON:0002329!8.45e-25!83;UBERON:0003077!8.45e-25!83;UBERON:0003059!8.45e-25!83;UBERON:0007282!8.45e-25!83;UBERON:0009618!8.45e-25!83;UBERON:0007285!8.45e-25!83;UBERON:0000486!1.00e-21!82;UBERON:0004290!1.97e-20!70;UBERON:0003102!2.88e-17!95;UBERON:0005256!7.76e-16!143;UBERON:0001637!1.62e-15!42;UBERON:0003509!1.62e-15!42;UBERON:0004572!1.62e-15!42;UBERON:0001134!3.58e-15!61;UBERON:0002036!3.58e-15!61;UBERON:0003082!3.58e-15!61;UBERON:0002385!4.65e-14!63;UBERON:0001015!4.65e-14!63;UBERON:0000383!4.65e-14!63;UBERON:0002199!6.33e-14!45;UBERON:0002416!6.33e-14!45;UBERON:0002097!9.17e-14!40;UBERON:0004573!1.34e-13!33;UBERON:0004571!1.34e-13!33;UBERON:0000490!6.84e-11!138;UBERON:0002100!2.19e-10!216;UBERON:0001981!4.01e-10!60;UBERON:0007500!4.01e-10!60;UBERON:0004537!4.01e-10!60;UBERON:0006965!4.01e-10!60;UBERON:0004872!1.84e-09!84;UBERON:0000055!3.02e-09!69;UBERON:0002049!1.64e-08!79;UBERON:0007798!1.64e-08!79;UBERON:0000475!1.72e-08!365;UBERON:0003104!5.45e-08!238;UBERON:0009142!5.45e-08!238;UBERON:0000947!1.28e-07!21;UBERON:0010191!1.28e-07!21;UBERON:0002067!1.96e-07!9;UBERON:0004016!1.96e-07!9;UBERON:0010083!1.96e-07!9;UBERON:0004237!6.90e-07!10;UBERON:0004695!6.90e-07!10;UBERON:0002111!6.90e-07!10;UBERON:0004178!6.90e-07!10 | |ontology_enrichment_uberon=UBERON:0000914!8.45e-25!83;UBERON:0002329!8.45e-25!83;UBERON:0003077!8.45e-25!83;UBERON:0003059!8.45e-25!83;UBERON:0007282!8.45e-25!83;UBERON:0009618!8.45e-25!83;UBERON:0007285!8.45e-25!83;UBERON:0000486!1.00e-21!82;UBERON:0004290!1.97e-20!70;UBERON:0003102!2.88e-17!95;UBERON:0005256!7.76e-16!143;UBERON:0001637!1.62e-15!42;UBERON:0003509!1.62e-15!42;UBERON:0004572!1.62e-15!42;UBERON:0001134!3.58e-15!61;UBERON:0002036!3.58e-15!61;UBERON:0003082!3.58e-15!61;UBERON:0002385!4.65e-14!63;UBERON:0001015!4.65e-14!63;UBERON:0000383!4.65e-14!63;UBERON:0002199!6.33e-14!45;UBERON:0002416!6.33e-14!45;UBERON:0002097!9.17e-14!40;UBERON:0004573!1.34e-13!33;UBERON:0004571!1.34e-13!33;UBERON:0000490!6.84e-11!138;UBERON:0002100!2.19e-10!216;UBERON:0001981!4.01e-10!60;UBERON:0007500!4.01e-10!60;UBERON:0004537!4.01e-10!60;UBERON:0006965!4.01e-10!60;UBERON:0004872!1.84e-09!84;UBERON:0000055!3.02e-09!69;UBERON:0002049!1.64e-08!79;UBERON:0007798!1.64e-08!79;UBERON:0000475!1.72e-08!365;UBERON:0003104!5.45e-08!238;UBERON:0009142!5.45e-08!238;UBERON:0000947!1.28e-07!21;UBERON:0010191!1.28e-07!21;UBERON:0002067!1.96e-07!9;UBERON:0004016!1.96e-07!9;UBERON:0010083!1.96e-07!9;UBERON:0004237!6.90e-07!10;UBERON:0004695!6.90e-07!10;UBERON:0002111!6.90e-07!10;UBERON:0004178!6.90e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.21e-14;41!UBERON:0004573;2.11e-12;33!UBERON:0004571;2.11e-12;33!UBERON:0002199;3.16e-11;46!UBERON:0002416;3.16e-11;46!UBERON:0003102;9.56e-10;50!UBERON:0002067;1.95e-09;9!UBERON:0001637;2.66e-09;42!UBERON:0003509;2.66e-09;42!UBERON:0004572;2.66e-09;42!UBERON:0004237;1.20e-08;10!UBERON:0004695;1.20e-08;10!UBERON:0002111;1.20e-08;10!UBERON:0004178;1.20e-08;10!UBERON:0002385;1.51e-08;31!UBERON:0001015;1.51e-08;31!UBERON:0000383;1.51e-08;31!UBERON:0000947;6.02e-07;21!UBERON:0010191;6.02e-07;21!UBERON:0001135;8.59e-07;15 | |||
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| ||
|short_description=p2@AOX1 | |short_description=p2@AOX1 | ||
}} | }} |
Latest revision as of 10:42, 19 September 2015
Short description: | p2@AOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000485106_5end |
EntrezGene: | AOX1 |
HGNC: | 553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.08e-18 | 76 |
muscle precursor cell | 4.80e-16 | 58 |
myoblast | 4.80e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.80e-16 | 58 |
vascular associated smooth muscle cell | 7.21e-15 | 32 |
skin fibroblast | 3.07e-14 | 23 |
muscle cell | 7.19e-14 | 55 |
smooth muscle cell | 3.15e-13 | 43 |
smooth muscle myoblast | 3.15e-13 | 43 |
electrically responsive cell | 2.46e-11 | 61 |
electrically active cell | 2.46e-11 | 61 |
mesodermal cell | 3.97e-11 | 121 |
embryonic cell | 5.94e-11 | 250 |
aortic smooth muscle cell | 1.05e-08 | 10 |
somatic stem cell | 2.79e-08 | 433 |
stem cell | 1.60e-07 | 441 |
multi fate stem cell | 1.65e-07 | 427 |
fibroblast of dermis | 2.88e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.18e-11 | 14 |