FFCP PHASE1:Hg19::chr14:23504087..23504118,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23504087..23504118,-
|short_description=p1@PSMB5
|description=CAGE_peak_1_at_PSMB5_5end
|association_with_transcript=0bp_to_ENST00000334454,ENST0000046092...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5693 | |EntrezGene=5693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9542 | |HGNC=9542 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3K3 | |UniProt=G3V3K3 | ||
|association_with_transcript=0bp_to_ENST00000334454,ENST00000460922,ENST00000493471_5end | |||
|cluster_id=chr14:23504087..23504118,- | |||
|coexpression_cluster_id=C3414 | |||
|description=CAGE_peak_1_at_PSMB5_5end | |||
|id=chr14:23504087..23504118,- | |||
|ontology_enrichment_celltype=CL:0002321!7.18e-33!248;CL:0000220!1.24e-32!246;CL:0000055!9.30e-31!180;CL:0000222!7.33e-27!119;CL:0000548!9.43e-24!679;CL:0000004!9.43e-24!679;CL:0000255!9.43e-24!679;CL:0000012!1.18e-22!682;CL:0000183!8.08e-22!59;CL:0000680!3.09e-20!57;CL:0000056!3.09e-20!57;CL:0000355!3.09e-20!57;CL:0000393!4.18e-20!60;CL:0000211!4.18e-20!60;CL:0000187!1.60e-19!54;CL:0000192!2.21e-17!42;CL:0000514!2.21e-17!42;CL:0000066!1.60e-16!254;CL:0000144!1.85e-16!625;CL:0000359!8.15e-15!32;CL:0002371!1.04e-13!591;CL:0000003!4.07e-11!722;CL:0002078!4.52e-09!44;CL:0000057!5.24e-09!75;CL:0000115!9.30e-09!35;CL:0000213!9.59e-08!57;CL:0000215!9.59e-08!57;CL:0002139!1.58e-07!24;CL:1000449!1.62e-07!16;CL:0000071!2.72e-07!18;CL:0002546!2.72e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.82e-14;32!CL:0000192;2.03e-12;43!CL:0000187;2.90e-11;55!CL:0000393;6.89e-10;61!CL:0000211;6.89e-10;61!CL:0000115;5.21e-08;36!CL:1000449;1.32e-07;15!CL:0002139;1.58e-07;24!CL:0000071;2.70e-07;18!CL:0002078;6.73e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.59e-33,250;CL:0000222,1.84e-27,121;CL:0000680,3.35e-20,58;CL:0000056,3.35e-20,58;CL:0000355,3.35e-20,58;CL:0000393,4.41e-20,61;CL:0000211,4.41e-20,61;CL:0000187,1.75e-19,55;CL:0000192,2.58e-17,43;CL:0000514,2.58e-17,43;CL:0000066,1.98e-16,253;CL:0000359,8.15e-15,32;CL:0002078,1.52e-09,45;CL:0000115,2.95e-09,36;CL:0000057,6.11e-09,76;CL:0000213,3.71e-08,58;CL:0000215,3.71e-08,58;CL:1000449,1.31e-07,15;CL:0002139,1.58e-07,24;CL:0000071,2.72e-07,18;CL:0002546,2.72e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;2.03e-12;43!CL:0000355;6.79e-11;58!CL:0000222;1.09e-07;121!CL:0002546;2.70e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.55e-24!143;UBERON:0003914!5.91e-24!118;UBERON:0000914!1.22e-23!83;UBERON:0002329!1.22e-23!83;UBERON:0003077!1.22e-23!83;UBERON:0003059!1.22e-23!83;UBERON:0007282!1.22e-23!83;UBERON:0009618!1.22e-23!83;UBERON:0007285!1.22e-23!83;UBERON:0004290!4.41e-22!70;UBERON:0000486!1.10e-21!82;UBERON:0002100!2.72e-21!216;UBERON:0000490!3.69e-21!138;UBERON:0002049!1.04e-20!79;UBERON:0007798!1.04e-20!79;UBERON:0001134!1.03e-19!61;UBERON:0002036!1.03e-19!61;UBERON:0003082!1.03e-19!61;UBERON:0003104!4.19e-18!238;UBERON:0009142!4.19e-18!238;UBERON:0002385!4.82e-18!63;UBERON:0001015!4.82e-18!63;UBERON:0000383!4.82e-18!63;UBERON:0000119!5.38e-18!312;UBERON:0004872!1.51e-17!84;UBERON:0000483!1.57e-17!309;UBERON:0000055!2.73e-17!69;UBERON:0001637!9.54e-17!42;UBERON:0003509!9.54e-17!42;UBERON:0004572!9.54e-17!42;UBERON:0001981!1.49e-16!60;UBERON:0007500!1.49e-16!60;UBERON:0004537!1.49e-16!60;UBERON:0006965!1.49e-16!60;UBERON:0000475!1.19e-15!365;UBERON:0000481!5.77e-15!347;UBERON:0004535!1.66e-13!110;UBERON:0001009!3.11e-13!113;UBERON:0004573!2.34e-12!33;UBERON:0004571!2.34e-12!33;UBERON:0000477!1.84e-11!286;UBERON:0000025!5.38e-10!194;UBERON:0004111!4.05e-09!241;UBERON:0000468!4.90e-09!659;UBERON:0009569!1.04e-08!113;UBERON:0004211!1.62e-07!16;UBERON:0001285!1.62e-07!16;UBERON:0007684!1.62e-07!16;UBERON:0003220!1.62e-07!16;UBERON:0004208!1.62e-07!16;UBERON:0000487!2.39e-07!22;UBERON:0001986!2.72e-07!18;UBERON:0004638!2.72e-07!18;UBERON:0004852!2.72e-07!18;UBERON:0006914!4.48e-07!25;UBERON:0006555!8.30e-07!17;UBERON:0005103!8.30e-07!17;UBERON:0000083!8.30e-07!17;UBERON:0009201!8.30e-07!17;UBERON:0004819!8.30e-07!17;UBERON:0006553!8.30e-07!17;UBERON:0003074!8.30e-07!17;UBERON:0003060!8.30e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.00e-12;42!UBERON:0003509;5.00e-12;42!UBERON:0004572;5.00e-12;42!UBERON:0004573;3.62e-11;33!UBERON:0004571;3.62e-11;33!UBERON:0003914;4.48e-11;74!UBERON:0007500;6.51e-11;56!UBERON:0001981;6.51e-11;56!UBERON:0004537;6.51e-11;56!UBERON:0002049;1.72e-09;75!UBERON:0007798;1.72e-09;75!UBERON:0000055;4.60e-09;65!UBERON:0006555;1.32e-07;15!UBERON:0004819;1.32e-07;15!UBERON:0001285;1.32e-07;15!UBERON:0007684;1.32e-07;15!UBERON:0000490;1.45e-07;33!UBERON:0000487;2.38e-07;22!UBERON:0004638;2.70e-07;18!UBERON:0001986;2.70e-07;18!UBERON:0004852;2.70e-07;18!UBERON:0000025;3.20e-07;93!UBERON:0006914;4.45e-07;25!UBERON:0000353;7.12e-07;15 | |||
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4767648 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|short_description=p1@PSMB5 | |||
}} | }} |
Latest revision as of 08:37, 19 September 2015
Short description: | p1@PSMB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMB5_5end |
Coexpression cluster: | C3414_Smooth_Alveolar_Mallassezderived_mucinous_Placental_Bronchial_hepatocellular |
Association with transcript: | 0bp_to_ENST00000334454, ENST00000460922, ENST00000493471_5end |
EntrezGene: | PSMB5 |
HGNC: | 9542 |
UniProt: | G3V3K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.59e-33 | 250 |
mesodermal cell | 1.84e-27 | 121 |
muscle precursor cell | 3.35e-20 | 58 |
myoblast | 3.35e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.35e-20 | 58 |
electrically responsive cell | 4.41e-20 | 61 |
electrically active cell | 4.41e-20 | 61 |
muscle cell | 1.75e-19 | 55 |
smooth muscle cell | 2.58e-17 | 43 |
smooth muscle myoblast | 2.58e-17 | 43 |
epithelial cell | 1.98e-16 | 253 |
vascular associated smooth muscle cell | 8.15e-15 | 32 |
meso-epithelial cell | 1.52e-09 | 45 |
endothelial cell | 2.95e-09 | 36 |
fibroblast | 6.11e-09 | 76 |
lining cell | 3.71e-08 | 58 |
barrier cell | 3.71e-08 | 58 |
epithelial cell of nephron | 1.31e-07 | 15 |
endothelial cell of vascular tree | 1.58e-07 | 24 |
blood vessel endothelial cell | 2.72e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.72e-07 | 18 |