FFCP PHASE1:Hg19::chr8:1772085..1772129,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9639 | |EntrezGene=9639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14103 | |HGNC=14103 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000349830_5end | |association_with_transcript=-12bp_to_ENST00000349830_5end | ||
|cluster_id=chr8:1772085..1772129,+ | |||
|description=CAGE_peak_1_at_ARHGEF10_5end | |description=CAGE_peak_1_at_ARHGEF10_5end | ||
|id=chr8:1772085..1772129,+ | |id=chr8:1772085..1772129,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.29e-20!180;CL:0000222!1.34e-12!119;CL:0002321!1.58e-11!248;CL:0000220!7.03e-11!246;CL:0000057!1.05e-10!75;CL:0002139!6.67e-09!24;CL:0002078!1.74e-07!44;CL:0000071!8.29e-07!18;CL:0002546!8.29e-07!18 | |ontology_enrichment_celltype=CL:0000055!3.29e-20!180;CL:0000222!1.34e-12!119;CL:0002321!1.58e-11!248;CL:0000220!7.03e-11!246;CL:0000057!1.05e-10!75;CL:0002139!6.67e-09!24;CL:0002078!1.74e-07!44;CL:0000071!8.29e-07!18;CL:0002546!8.29e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.97e-09;24!CL:0000071;7.19e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.81e-13,121;CL:0002321,5.12e-12,250;CL:0000057,6.86e-11,76;CL:0002139,5.99e-09,24;CL:0002078,1.40e-07,45;CL:0000680,6.68e-07,58;CL:0000056,6.68e-07,58;CL:0000355,6.68e-07,58;CL:0000187,6.76e-07,55;CL:0000071,7.68e-07,18;CL:0002546,7.68e-07,18;CL:0000115,8.34e-07,36;CL:0000359,9.69e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;7.19e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.55e-26!365;UBERON:0000119!1.37e-25!312;UBERON:0000483!9.80e-25!309;UBERON:0000477!3.02e-24!286;UBERON:0004111!7.32e-24!241;UBERON:0000025!7.33e-21!194;UBERON:0000468!7.97e-21!659;UBERON:0002049!2.33e-18!79;UBERON:0007798!2.33e-18!79;UBERON:0000467!1.20e-17!625;UBERON:0000480!2.79e-17!626;UBERON:0004121!1.91e-16!169;UBERON:0000481!2.26e-16!347;UBERON:0000055!8.72e-16!69;UBERON:0004872!1.51e-15!84;UBERON:0000924!4.17e-15!173;UBERON:0006601!4.17e-15!173;UBERON:0001981!5.70e-15!60;UBERON:0007500!5.70e-15!60;UBERON:0004537!5.70e-15!60;UBERON:0006965!5.70e-15!60;UBERON:0003075!1.61e-14!86;UBERON:0007284!1.61e-14!86;UBERON:0000033!3.73e-14!123;UBERON:0000153!3.73e-13!129;UBERON:0007811!3.73e-13!129;UBERON:0000922!7.18e-13!612;UBERON:0002346!1.03e-12!90;UBERON:0001009!1.28e-12!113;UBERON:0007023!2.44e-12!115;UBERON:0004535!3.95e-12!110;UBERON:0000073!4.02e-12!94;UBERON:0001016!4.02e-12!94;UBERON:0005743!8.15e-12!86;UBERON:0001017!1.44e-11!82;UBERON:0000955!4.88e-11!69;UBERON:0006238!4.88e-11!69;UBERON:0002050!7.44e-11!605;UBERON:0005423!7.44e-11!605;UBERON:0001637!7.81e-11!42;UBERON:0003509!7.81e-11!42;UBERON:0004572!7.81e-11!42;UBERON:0003914!9.09e-11!118;UBERON:0000923!1.37e-10!604;UBERON:0005291!1.37e-10!604;UBERON:0006598!1.37e-10!604;UBERON:0002532!1.37e-10!604;UBERON:0001049!1.10e-09!57;UBERON:0005068!1.10e-09!57;UBERON:0006241!1.10e-09!57;UBERON:0007135!1.10e-09!57;UBERON:0002616!2.81e-09!59;UBERON:0004573!3.62e-09!33;UBERON:0004571!3.62e-09!33;UBERON:0002100!5.83e-09!216;UBERON:0003056!1.03e-08!61;UBERON:0000914!1.12e-08!83;UBERON:0002329!1.12e-08!83;UBERON:0003077!1.12e-08!83;UBERON:0003059!1.12e-08!83;UBERON:0007282!1.12e-08!83;UBERON:0009618!1.12e-08!83;UBERON:0007285!1.12e-08!83;UBERON:0000064!2.59e-08!219;UBERON:0005256!4.12e-08!143;UBERON:0000947!4.24e-08!21;UBERON:0010191!4.24e-08!21;UBERON:0002780!3.16e-07!41;UBERON:0001890!3.16e-07!41;UBERON:0006240!3.16e-07!41;UBERON:0003104!4.31e-07!238;UBERON:0009142!4.31e-07!238;UBERON:0000486!4.94e-07!82;UBERON:0003080!5.78e-07!42;UBERON:0004290!6.04e-07!70;UBERON:0000490!6.59e-07!138;UBERON:0001986!8.29e-07!18;UBERON:0004638!8.29e-07!18;UBERON:0004852!8.29e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.31e-08;33!UBERON:0004571;1.31e-08;33!UBERON:0001637;1.34e-08;42!UBERON:0003509;1.34e-08;42!UBERON:0004572;1.34e-08;42!UBERON:0000947;3.01e-08;21!UBERON:0010191;3.01e-08;21!UBERON:0007500;3.24e-08;56!UBERON:0001981;3.24e-08;56!UBERON:0004537;3.24e-08;56!UBERON:0000055;3.94e-08;65!UBERON:0002049;6.23e-07;75!UBERON:0007798;6.23e-07;75!UBERON:0004638;7.19e-07;18!UBERON:0001986;7.19e-07;18!UBERON:0004852;7.19e-07;18 | |||
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| ||
|short_description=p1@ARHGEF10 | |short_description=p1@ARHGEF10 | ||
}} | }} |
Latest revision as of 05:26, 17 September 2015
Short description: | p1@ARHGEF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF10_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000349830_5end |
EntrezGene: | ARHGEF10 |
HGNC: | 14103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.81e-13 | 121 |
embryonic cell | 5.12e-12 | 250 |
fibroblast | 6.86e-11 | 76 |
endothelial cell of vascular tree | 5.99e-09 | 24 |
meso-epithelial cell | 1.40e-07 | 45 |
muscle precursor cell | 6.68e-07 | 58 |
myoblast | 6.68e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.68e-07 | 58 |
muscle cell | 6.76e-07 | 55 |
blood vessel endothelial cell | 7.68e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.68e-07 | 18 |
endothelial cell | 8.34e-07 | 36 |
vascular associated smooth muscle cell | 9.69e-07 | 32 |