FFCP PHASE1:Hg19::chr8:144822777..144822788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:144822777..144822788,- | |||
|description=CAGE_peak_at_chr8:144822777..144822788,- | |description=CAGE_peak_at_chr8:144822777..144822788,- | ||
|id=chr8:144822777..144822788,- | |id=chr8:144822777..144822788,- | ||
|ontology_enrichment_celltype=CL:0000066!4.55e-15!254;CL:0002076!1.05e-11!43;CL:0000223!1.52e-10!59;CL:0002251!4.65e-08!21;CL:0002322!4.47e-07!5;CL:0002150!7.64e-07!3;CL:0000861!7.64e-07!3 | |ontology_enrichment_celltype=CL:0000066!4.55e-15!254;CL:0002076!1.05e-11!43;CL:0000223!1.52e-10!59;CL:0002251!4.65e-08!21;CL:0002322!4.47e-07!5;CL:0002150!7.64e-07!3;CL:0000861!7.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;9.43e-11;3!CL:0000082;5.75e-07;19!CL:0000312;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.20e-10,3;CL:0000312,6.04e-07,5;CL:0000082,6.19e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.83e-26!106;DOID:1749!5.62e-20!14;DOID:0050687!2.46e-18!143;DOID:162!6.46e-09!235;DOID:14566!1.72e-08!239;DOID:0050615!3.79e-08!16;DOID:299!6.40e-07!25;DOID:1324!8.22e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.91e-15;2!DOID:1324;1.39e-08;15!DOID:0050615;4.19e-08;16!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.74e-15,2;DOID:1324,1.53e-08,15;DOID:0050615,4.58e-08,16;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.09e-11!169;UBERON:0000925!8.09e-11!169;UBERON:0006595!8.09e-11!169;UBERON:0000344!5.63e-10!12;UBERON:0001007!8.54e-09!155;UBERON:0001555!8.54e-09!155;UBERON:0007026!8.54e-09!155;UBERON:0003343!1.11e-08!4;UBERON:0004785!1.11e-08!4;UBERON:0005911!4.54e-07!82;UBERON:0004921!6.06e-07!129;UBERON:0004185!6.06e-07!129;UBERON:0003729!6.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0002114;9.43e-11;2!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0009856;2.18e-08;4!UBERON:0004802;5.75e-07;19!UBERON:0000115;5.75e-07;19!UBERON:0002108;5.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.74e-15,2;UBERON:0002173,2.74e-15,2;UBERON:0002186,2.74e-15,2;UBERON:0002114,1.09e-10,2;UBERON:0004821,1.20e-10,3;UBERON:0003215,1.20e-10,3;UBERON:0010368,1.20e-10,3;UBERON:0009911,1.20e-10,3;UBERON:0002299,1.20e-10,3;UBERON:0006524,1.20e-10,3;UBERON:0008874,1.20e-10,3;UBERON:0002169,1.20e-10,3;UBERON:0004894,1.20e-10,3;UBERON:0004802,6.19e-07,19;UBERON:0000115,6.19e-07,19;UBERON:0002108,6.39e-07,4 | |||
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| ||
|short_description=p@chr8:144822777..144822788,- | |short_description=p@chr8:144822777..144822788,- | ||
}} | }} |
Latest revision as of 15:57, 31 July 2015
Short description: | p@chr8:144822777..144822788, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144822777..144822788, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.20e-10 | 3 |
keratinocyte | 6.04e-07 | 5 |
epithelial cell of lung | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.74e-15 | 2 |
alveolar duct | 2.74e-15 | 2 |
bronchiole | 2.74e-15 | 2 |
duodenum | 1.09e-10 | 2 |
pulmonary alveolus epithelium | 1.20e-10 | 3 |
alveolus | 1.20e-10 | 3 |
pulmonary lobule | 1.20e-10 | 3 |
lobule | 1.20e-10 | 3 |
alveolus of lung | 1.20e-10 | 3 |
alveolar system | 1.20e-10 | 3 |
pulmonary acinus | 1.20e-10 | 3 |
alveolar sac | 1.20e-10 | 3 |
alveolar wall | 1.20e-10 | 3 |
respiratory tract epithelium | 6.19e-07 | 19 |
lung epithelium | 6.19e-07 | 19 |
small intestine | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.74e-15 | 2 |
lung cancer | 1.53e-08 | 15 |
respiratory system cancer | 4.58e-08 | 16 |
non-small cell lung carcinoma | 6.77e-07 | 5 |