FFCP PHASE1:Hg19::chr2:170665139..170665155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6741 | |EntrezGene=6741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11316 | |HGNC=11316 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=152bp_to_ENST00000490914_5end | |association_with_transcript=152bp_to_ENST00000490914_5end | ||
|cluster_id=chr2:170665139..170665155,+ | |||
|coexpression_cluster_id=C614 | |||
|description=CAGE_peak_5_at_SSB_5end | |description=CAGE_peak_5_at_SSB_5end | ||
|id=chr2:170665139..170665155,+ | |id=chr2:170665139..170665155,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.48e-21!180;CL:0000057!7.58e-21!75;CL:0002620!4.21e-10!23;CL:0000136!1.02e-08!15;CL:0000048!2.59e-07!430;CL:0000723!8.43e-07!436 | |ontology_enrichment_celltype=CL:0000055!1.48e-21!180;CL:0000057!7.58e-21!75;CL:0002620!4.21e-10!23;CL:0000136!1.02e-08!15;CL:0000048!2.59e-07!430;CL:0000723!8.43e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.33e-17;13!CL:0000056;2.11e-09;4!CL:0002540;2.23e-08;6!CL:0002615;2.96e-08;3!CL:0002334;5.19e-08;12!CL:0000515;6.97e-08;3!CL:0002579;1.19e-07;3!CL:0000057;8.68e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.85e-15,76;CL:0000136,1.09e-14,15;CL:0000048,1.20e-09,427;CL:0000515,2.22e-09,4;CL:0000723,2.88e-09,433;CL:0002320,7.06e-09,361;CL:0000034,8.80e-09,441;CL:0002540,1.61e-08,6;CL:0002615,2.97e-08,3;CL:0002334,6.15e-08,12;CL:0002579,1.21e-07,3;CL:0000134,2.51e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000515;2.11e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.55e-09!83;UBERON:0002329!1.55e-09!83;UBERON:0003077!1.55e-09!83;UBERON:0003059!1.55e-09!83;UBERON:0007282!1.55e-09!83;UBERON:0009618!1.55e-09!83;UBERON:0007285!1.55e-09!83;UBERON:0003688!4.49e-08!6;UBERON:0002358!4.49e-08!6;UBERON:0003684!4.49e-08!6;UBERON:0001178!4.49e-08!6;UBERON:0004457!3.00e-07!12;UBERON:0000042!3.00e-07!12;UBERON:0002100!5.93e-07!216;UBERON:0004290!6.14e-07!70 | |ontology_enrichment_uberon=UBERON:0000914!1.55e-09!83;UBERON:0002329!1.55e-09!83;UBERON:0003077!1.55e-09!83;UBERON:0003059!1.55e-09!83;UBERON:0007282!1.55e-09!83;UBERON:0009618!1.55e-09!83;UBERON:0007285!1.55e-09!83;UBERON:0003688!4.49e-08!6;UBERON:0002358!4.49e-08!6;UBERON:0003684!4.49e-08!6;UBERON:0001178!4.49e-08!6;UBERON:0004457!3.00e-07!12;UBERON:0000042!3.00e-07!12;UBERON:0002100!5.93e-07!216;UBERON:0004290!6.14e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.17e-14;6!UBERON:0002358;3.17e-14;6!UBERON:0003684;3.17e-14;6!UBERON:0001178;3.17e-14;6!UBERON:0004457;3.69e-09;9!UBERON:0000042;3.69e-09;9!UBERON:0000075;6.43e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.23e-14,6;UBERON:0002358,3.23e-14,6;UBERON:0003684,3.23e-14,6;UBERON:0001178,3.23e-14,6;UBERON:0002384,2.03e-09,371;UBERON:0000075,4.58e-07,16 | |||
|phase1_expression=21.4380487539257,15.2011371962598,54.4083999810449,34.0249214400643,25.9237434767827,33.148863915814,0,0,0,0,0,0,0,1.23766352960047,1.98838425436749,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81297636055767,15.1804444001518,5.0133791063589,10.1392563272577,0,0.486634870302636,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,2.5326102332916,0,0.286836620748814,0,2.80338800071154,0,0.24666754841716,3.42332138939743,1.61652806483626,1.63461903113459,0,0,0,0.624320153660641,0.570471821544449,0.298897361103602,1.05691048779388,4.37056949793955,3.79217178096071,7.34955016517616,0.368502951935304,1.23990937410919,0,1.23633464639278,0.910161361938026,0.718618141816238,0.841680569770331,1.87677779807946,17.7321033909877,1.75591048352335,10.7270728529657,0.600952235626387,9.1880068359617,0.89694817844431,0.427114777637135,0.211931901159562,0,0.103052529238439,1.54584324027377,0.744467425326359,0,0.389748020644795,0,0.0920498986422993,0.161646056818812,1.06502877754984,1.20902517873168,2.37384829234683,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,27.8620756819187,15.8813485967309,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,1.88724591328378,0,0,0,0,0.651616610620649,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,1.45770409648969,0.43596006883328,2.933531432838,0,3.57656445851882,0,0.531876233169741,5.2003718455683,4.37252536245642,8.5109479213967,1.5985330740966,1.71573592389777,0,0,0,0.710783897485092,0,0,0,0,0,0,0,5.5113716763064,4.59447743336456,1.42636905040718,42.1313602402656,8.6300055471161,9.84835297819426,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,1.47229790062968,3.00102312635806,0.813795071099207,0,1.42743191037729,0.630809660135739,0.234282829985426,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.30239029332968,2.48107807818777,1.53461973288062,0.841980283299221,10.7636885374789,7.16390148693385,8.20354997832398,28.1994326245483,0,0,0.246381468041427,0,1.04589340613963,0,0,0,0.34444334449382,0,0.524497659837696,0,0.231046011313244,0,0,0,0,0,0.863663664408557,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0.15350367472613,1.65403886981437,0.429680979473094,0.145016693914229,0.426133137080504,0,0,0,0,0,1.39453664789186,0.94443704049192,0,0,0.532306030317022,0,0,0.286249773483982,2.232950216158,3.48017367190598,0.953150969619124,0.767693373934002,0,0,0,5.39617372749944,0.274537029736055,0,0.808729926293264,1.58510321173008,0,0,0,0,1.09199929126389,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.430234056612155,18.667317792493,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,15.9693915406364,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,61.2747987693761,0,0,0,0.197286811273867,0,361.19521797007,0,0.0927680981618513,0,0,0,31.8999813191309,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,5.86224597771919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,1.83328339209347,0,0,0,0.223171457441873,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20117668174708,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.157204305099666,0,0.992332043623902,0,0,0,32.097050398799,57.1572958371756,22.6695726804962,33.7708809631099,0,0,0,0,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,1.51522404220071,0.50313580350515,1.77962244319307,1.60188047877847,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,1.04349012362347,0,5.71207818253193,0,0,0,0,3.18476710958893,101.607052224441,0.686791410365586,0,13.8803388051516,0,3.85994864474866,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0,0,0.157265941855896,0,0,0,0,0,1.27201740261367,0.0788617450012534,0,0,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,1.60342272946051,0,0.3414369541879,4.14755797088455,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,1.0195626881269,0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| ||
|short_description=p5@SSB | |short_description=p5@SSB | ||
}} | }} |
Latest revision as of 02:46, 18 September 2015
Short description: | p5@SSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SSB_5end |
Coexpression cluster: | C614_bone_mesenchymal_basal_mesodermal_Adipocyte_mature_Myoblast |
Association with transcript: | 152bp_to_ENST00000490914_5end |
EntrezGene: | SSB |
HGNC: | 11316 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.85e-15 | 76 |
fat cell | 1.09e-14 | 15 |
multi fate stem cell | 1.20e-09 | 427 |
skeletal muscle myoblast | 2.22e-09 | 4 |
somatic stem cell | 2.88e-09 | 433 |
connective tissue cell | 7.06e-09 | 361 |
stem cell | 8.80e-09 | 441 |
mesenchymal stem cell of the bone marrow | 1.61e-08 | 6 |
adipocyte of omentum tissue | 2.97e-08 | 3 |
preadipocyte | 6.15e-08 | 12 |
omentum preadipocyte | 1.21e-07 | 3 |
mesenchymal cell | 2.51e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.23e-14 | 6 |
peritoneum | 3.23e-14 | 6 |
abdominal cavity | 3.23e-14 | 6 |
visceral peritoneum | 3.23e-14 | 6 |
connective tissue | 2.03e-09 | 371 |
subdivision of skeletal system | 4.58e-07 | 16 |