FFCP PHASE1:Hg19::chr2:152955669..152955696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=785 | |EntrezGene=785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1404 | |HGNC=1404 | ||
|TSSclassifier=strong | |||
|UniProt=O00305,A7BJ74 | |UniProt=O00305,A7BJ74 | ||
|association_with_transcript=-76bp_to_ENST00000539935,NM_000726,NM_001145798,uc002tya.2,uc010fnz.2_5end | |association_with_transcript=-76bp_to_ENST00000539935,NM_000726,NM_001145798,uc002tya.2,uc010fnz.2_5end | ||
|cluster_id=chr2:152955669..152955696,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_6_at_CACNB4_5end | |description=CAGE_peak_6_at_CACNB4_5end | ||
|id=chr2:152955669..152955696,- | |id=chr2:152955669..152955696,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.17e-16;2!UBERON:0006601;6.49e-11;82!UBERON:0006222;2.04e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.53e-48!82;UBERON:0005743!9.44e-47!86;UBERON:0002780!5.28e-46!41;UBERON:0001890!5.28e-46!41;UBERON:0006240!5.28e-46!41;UBERON:0003080!1.14e-44!42;UBERON:0001049!1.08e-43!57;UBERON:0005068!1.08e-43!57;UBERON:0006241!1.08e-43!57;UBERON:0007135!1.08e-43!57;UBERON:0001869!1.16e-43!32;UBERON:0001893!1.56e-43!34;UBERON:0002791!1.26e-41!33;UBERON:0000073!6.66e-41!94;UBERON:0001016!6.66e-41!94;UBERON:0002020!2.57e-40!34;UBERON:0003528!2.57e-40!34;UBERON:0000955!7.45e-40!69;UBERON:0006238!7.45e-40!69;UBERON:0002616!1.98e-39!59;UBERON:0001950!3.04e-36!20;UBERON:0000956!1.10e-33!25;UBERON:0000203!1.10e-33!25;UBERON:0003056!4.65e-33!61;UBERON:0003075!7.53e-33!86;UBERON:0007284!7.53e-33!86;UBERON:0002619!1.66e-32!22;UBERON:0002346!8.56e-31!90;UBERON:0007023!6.80e-23!115;UBERON:0000033!2.54e-21!123;UBERON:0004121!4.92e-20!169;UBERON:0000153!1.02e-19!129;UBERON:0007811!1.02e-19!129;UBERON:0000924!3.21e-19!173;UBERON:0006601!3.21e-19!173;UBERON:0000200!1.09e-12!6;UBERON:0001871!2.90e-12!7;UBERON:0002420!3.08e-11!9;UBERON:0007245!3.08e-11!9;UBERON:0010009!3.08e-11!9;UBERON:0010011!3.08e-11!9;UBERON:0000454!3.08e-11!9;UBERON:0002021!5.11e-11!5;UBERON:0001872!9.27e-11!5;UBERON:0000369!1.62e-09!4;UBERON:0002435!1.62e-09!4;UBERON:0000204!1.62e-09!4;UBERON:0010082!1.62e-09!4;UBERON:0002308!2.44e-08!9;UBERON:0000125!2.44e-08!9;UBERON:0000025!3.84e-08!194;UBERON:0009663!5.18e-08!7;UBERON:0005383!1.69e-07!3;UBERON:0005382!1.69e-07!3;UBERON:0002771!4.31e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.35e-69;32!UBERON:0001893;1.92e-65;34!UBERON:0002791;1.31e-64;32!UBERON:0003528;9.00e-60;34!UBERON:0002020;9.00e-60;34!UBERON:0001950;5.79e-59;20!UBERON:0002619;1.20e-53;22!UBERON:0002780;6.68e-49;41!UBERON:0001890;6.68e-49;41!UBERON:0000956;3.33e-47;25!UBERON:0000203;3.33e-47;25!UBERON:0000369;6.05e-32;4!UBERON:0002435;6.05e-32;4!UBERON:0000204;6.05e-32;4!UBERON:0000955;2.75e-29;68!UBERON:0000073;1.53e-28;53!UBERON:0002616;1.53e-28;53!UBERON:0009663;2.85e-28;7!UBERON:0001017;2.06e-25;75!UBERON:0002021;4.75e-25;5!UBERON:0005383;2.64e-24;3!UBERON:0005382;2.64e-24;3!UBERON:0002420;5.66e-22;9!UBERON:0000125;5.66e-22;9!UBERON:0007245;5.66e-22;9!UBERON:0002308;5.66e-22;9!UBERON:0010009;5.66e-22;9!UBERON:0010011;5.66e-22;9!UBERON:0000454;5.66e-22;9!UBERON:0000200;1.06e-20;6!UBERON:0001016;1.58e-18;83!UBERON:0001871;1.36e-17;6!UBERON:0001873;1.17e-16;2!UBERON:0002771;2.37e-16;2!UBERON:0001872;3.99e-14;5!UBERON:0007023;2.24e-10;114!UBERON:0001882;2.04e-09;1!UBERON:0001874;2.04e-09;1!UBERON:0005403;2.04e-09;1!UBERON:0002902;3.30e-09;1!UBERON:0002022;3.30e-09;1!UBERON:0009899;3.30e-09;1!UBERON:0007190;3.30e-09;1!UBERON:0002581;7.26e-09;1!UBERON:0003112;7.26e-09;1!UBERON:0011158;7.26e-09;1!UBERON:0003128;7.26e-09;1!UBERON:0001703;7.26e-09;1!UBERON:0002241;7.26e-09;1!UBERON:0011216;2.34e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.73e-81,32;UBERON:0001893,4.29e-76,34;UBERON:0002791,2.31e-72,32;UBERON:0002780,4.66e-70,41;UBERON:0001890,4.66e-70,41;UBERON:0003080,4.66e-70,41;UBERON:0006240,4.66e-70,41;UBERON:0003528,4.73e-68,34;UBERON:0002020,4.73e-68,34;UBERON:0001950,4.17e-59,20;UBERON:0001017,4.11e-54,81;UBERON:0002619,8.89e-54,22;UBERON:0000073,9.64e-54,53;UBERON:0002616,9.64e-54,53;UBERON:0001049,9.80e-51,56;UBERON:0005068,9.80e-51,56;UBERON:0006241,9.80e-51,56;UBERON:0007135,9.80e-51,56;UBERON:0000955,1.33e-49,68;UBERON:0006238,1.33e-49,68;UBERON:0001016,1.87e-48,89;UBERON:0000956,2.56e-47,25;UBERON:0000203,2.56e-47,25;UBERON:0003056,2.28e-46,61;UBERON:0003075,9.17e-34,82;UBERON:0007284,9.17e-34,82;UBERON:0002346,4.73e-32,86;UBERON:0000369,7.10e-32,4;UBERON:0002435,7.10e-32,4;UBERON:0000204,7.10e-32,4;UBERON:0010082,7.10e-32,4;UBERON:0009663,3.57e-28,7;UBERON:0010371,5.91e-26,104;UBERON:0002021,4.20e-25,5;UBERON:0005383,3.62e-24,3;UBERON:0005382,3.62e-24,3;UBERON:0004121,8.34e-24,171;UBERON:0000924,8.34e-24,171;UBERON:0006601,8.34e-24,171;UBERON:0007023,1.40e-23,114;UBERON:0010314,5.65e-22,132;UBERON:0002420,6.75e-22,9;UBERON:0000125,6.75e-22,9;UBERON:0007245,6.75e-22,9;UBERON:0002308,6.75e-22,9;UBERON:0010009,6.75e-22,9;UBERON:0010011,6.75e-22,9;UBERON:0000454,6.75e-22,9;UBERON:0000200,1.24e-20,6;UBERON:0011216,5.18e-19,223;UBERON:0001871,1.70e-17,6;UBERON:0001873,1.60e-16,2;UBERON:0010122,1.60e-16,2;UBERON:0002771,4.08e-16,2;UBERON:0001872,2.31e-14,5;UBERON:0000025,1.77e-12,192;UBERON:0001882,1.74e-09,1;UBERON:0005403,1.74e-09,1;UBERON:0001874,2.04e-09,1;UBERON:0002902,2.82e-09,1;UBERON:0009899,2.82e-09,1;UBERON:0004111,2.91e-09,240;UBERON:0007190,3.31e-09,1;UBERON:0002022,4.19e-09,1;UBERON:0002581,5.31e-09,1;UBERON:0003112,8.49e-09,1;UBERON:0011158,8.49e-09,1;UBERON:0003128,8.49e-09,1;UBERON:0001703,8.49e-09,1;UBERON:0002241,8.49e-09,1;UBERON:0004761,8.49e-09,1;UBERON:0009617,8.49e-09,1 | |||
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|short_description=p6@CACNB4 | |short_description=p6@CACNB4 | ||
}} | }} |
Latest revision as of 14:06, 17 September 2015
Short description: | p6@CACNB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CACNB4_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -76bp_to_ENST00000539935, NM_000726, NM_001145798, uc002tya.2, uc010fnz.2_5end |
EntrezGene: | CACNB4 |
HGNC: | 1404 |
UniProt: | O00305A7BJ74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data