FFCP PHASE1:Hg19::chr2:113981853..113981863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113981853..113981863,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113981853..113981863,- | |description=CAGE_peak_at_chr2:113981853..113981863,- | ||
|id=chr2:113981853..113981863,- | |id=chr2:113981853..113981863,- | ||
|ontology_enrichment_celltype=CL:0000159!5.95e-11!2;CL:1000497!4.98e-09!18;CL:0002518!4.98e-09!18 | |ontology_enrichment_celltype=CL:0000159!5.95e-11!2;CL:1000497!4.98e-09!18;CL:0002518!4.98e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.89e-12;3!CL:1000615;2.89e-12;3!CL:0002306;2.89e-12;3!CL:1000497;1.00e-08;17!CL:0002518;1.00e-08;17!CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.59e-12,3;CL:1000615,2.59e-12,3;CL:0002306,2.59e-12,3;CL:1000497,9.62e-09,17;CL:0002518,9.62e-09,17;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.35e-08;5 | |||
|ontology_enrichment_disease=DOID:4468!7.23e-11!2;DOID:120!3.72e-10!27;DOID:193!2.28e-09!29 | |ontology_enrichment_disease=DOID:4468!7.23e-11!2;DOID:120!3.72e-10!27;DOID:193!2.28e-09!29 | ||
|ontology_enrichment_disease_v019=DOID:4468;6.48e-18;2!DOID:3001;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.66e-16!5;UBERON:0004117!6.66e-16!5;UBERON:0007689!6.66e-16!5;UBERON:0007123!6.66e-16!5;UBERON:0003091!6.66e-16!5;UBERON:0002113!9.33e-13!27;UBERON:0003918!9.33e-13!27;UBERON:0005095!9.33e-13!27;UBERON:0007687!9.33e-13!27;UBERON:0000341!1.23e-10!2;UBERON:0000489!1.62e-10!32;UBERON:0006947!1.39e-07!3;UBERON:0004054!1.39e-07!3;UBERON:0009722!2.92e-07!11;UBERON:0007690!2.92e-07!11;UBERON:0006554!3.16e-07!44;UBERON:0001008!4.94e-07!45;UBERON:0003886!8.73e-07!63;UBERON:0006555!8.96e-07!17;UBERON:0005103!8.96e-07!17;UBERON:0000083!8.96e-07!17;UBERON:0009201!8.96e-07!17;UBERON:0004819!8.96e-07!17;UBERON:0006553!8.96e-07!17;UBERON:0003074!8.96e-07!17;UBERON:0003060!8.96e-07!17;UBERON:0005172!9.00e-07!55;UBERON:0005173!9.00e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;7.06e-34;1!UBERON:0005352;7.06e-34;1!UBERON:0006853;2.89e-12;3!UBERON:0007685;2.89e-12;3!UBERON:0004134;2.89e-12;3!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0002046;5.35e-08;5!UBERON:0004175;2.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,9.85e-34,1;UBERON:0005352,9.85e-34,1;UBERON:0006853,2.59e-12,3;UBERON:0007685,2.59e-12,3;UBERON:0004134,2.59e-12,3;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0005904,1.70e-09,4;UBERON:0002046,5.35e-08,5;UBERON:0004117,5.35e-08,5;UBERON:0007689,5.35e-08,5;UBERON:0007123,5.35e-08,5;UBERON:0003091,5.35e-08,5 | |||
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|short_description=p@chr2:113981853..113981863,- | |short_description=p@chr2:113981853..113981863,- | ||
}} | }} |
Latest revision as of 23:36, 28 July 2015
Short description: | p@chr2:113981853..113981863, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113981853..113981863, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.59e-12 | 3 |
kidney cortex tubule cell | 2.59e-12 | 3 |
epithelial cell of proximal tubule | 2.59e-12 | 3 |
kidney cell | 9.62e-09 | 17 |
kidney epithelial cell | 9.62e-09 | 17 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 9.85e-34 | 1 |
spermatic cord | 9.85e-34 | 1 |
renal cortex tubule | 2.59e-12 | 3 |
region of nephron tubule | 2.59e-12 | 3 |
proximal tubule | 2.59e-12 | 3 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
duct of male reproductive system | 1.70e-09 | 4 |
thyroid gland | 5.35e-08 | 5 |
pharyngeal pouch | 5.35e-08 | 5 |
thyroid diverticulum | 5.35e-08 | 5 |
pharyngeal pouch 2 | 5.35e-08 | 5 |
thyroid primordium | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.48e-18 | 2 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |