FFCP PHASE1:Hg19::chr7:65540865..65540895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=435 | |EntrezGene=435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=746 | |HGNC=746 | ||
|TSSclassifier=strong | |||
|UniProt=F8W943,E7EMI0 | |UniProt=F8W943,E7EMI0 | ||
|association_with_transcript=0bp_to_ENST00000362000,ENST00000395331_5end | |association_with_transcript=0bp_to_ENST00000362000,ENST00000395331_5end | ||
|cluster_id=chr7:65540865..65540895,+ | |||
|description=CAGE_peak_3_at_ASL_5end | |description=CAGE_peak_3_at_ASL_5end | ||
|id=chr7:65540865..65540895,+ | |id=chr7:65540865..65540895,+ | ||
|ontology_enrichment_celltype=CL:0002371!6.97e-09!591;CL:0000359!8.27e-09!32;CL:0002139!8.75e-09!24;CL:0000222!1.65e-08!119;CL:0000071!1.67e-08!18;CL:0002546!1.67e-08!18;CL:0000115!2.69e-08!35;CL:0002078!5.00e-07!44 | |ontology_enrichment_celltype=CL:0002371!6.97e-09!591;CL:0000359!8.27e-09!32;CL:0002139!8.75e-09!24;CL:0000222!1.65e-08!119;CL:0000071!1.67e-08!18;CL:0002546!1.67e-08!18;CL:0000115!2.69e-08!35;CL:0002078!5.00e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.21e-08;24!CL:0000071;1.96e-08;18!CL:0000359;9.07e-08;32!CL:0000115;1.29e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.25e-09,24;CL:0000359,1.15e-08,32;CL:0000071,1.21e-08,18;CL:0002546,1.21e-08,18;CL:0000115,1.41e-08,36;CL:0000222,9.15e-08,121;CL:0002078,2.51e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.96e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.73e-16!69;UBERON:0004872!4.06e-15!84;UBERON:0003914!4.38e-15!118;UBERON:0001981!4.52e-15!60;UBERON:0007500!4.52e-15!60;UBERON:0004537!4.52e-15!60;UBERON:0006965!4.52e-15!60;UBERON:0003081!6.25e-15!216;UBERON:0001637!1.67e-14!42;UBERON:0003509!1.67e-14!42;UBERON:0004572!1.67e-14!42;UBERON:0002049!3.15e-12!79;UBERON:0007798!3.15e-12!79;UBERON:0004573!1.64e-10!33;UBERON:0004571!1.64e-10!33;UBERON:0004535!1.76e-10!110;UBERON:0001009!2.14e-10!113;UBERON:0000487!1.44e-09!22;UBERON:0001986!1.67e-08!18;UBERON:0004638!1.67e-08!18;UBERON:0004852!1.67e-08!18;UBERON:0006914!9.25e-08!25;UBERON:0000926!1.44e-07!448;UBERON:0004120!1.44e-07!448;UBERON:0006603!1.44e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.23e-10;42!UBERON:0003509;2.23e-10;42!UBERON:0004572;2.23e-10;42!UBERON:0000487;1.19e-09;22!UBERON:0003914;4.64e-09;74!UBERON:0004573;7.44e-09;33!UBERON:0004571;7.44e-09;33!UBERON:0007500;1.87e-08;56!UBERON:0001981;1.87e-08;56!UBERON:0004537;1.87e-08;56!UBERON:0004638;1.96e-08;18!UBERON:0001986;1.96e-08;18!UBERON:0004852;1.96e-08;18!UBERON:0000055;3.79e-08;65!UBERON:0006914;6.42e-08;25!UBERON:0000490;2.06e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.40e-17,68;UBERON:0003914,5.73e-16,117;UBERON:0007500,1.08e-15,59;UBERON:0001981,1.08e-15,59;UBERON:0004537,1.08e-15,59;UBERON:0006965,1.08e-15,59;UBERON:0004872,1.65e-15,83;UBERON:0003081,2.18e-15,203;UBERON:0001637,9.12e-15,42;UBERON:0003509,9.12e-15,42;UBERON:0004572,9.12e-15,42;UBERON:0002049,2.16e-12,78;UBERON:0007798,2.16e-12,78;UBERON:0004535,1.03e-10,109;UBERON:0004573,1.08e-10,33;UBERON:0004571,1.08e-10,33;UBERON:0001009,1.27e-10,112;UBERON:0000487,9.90e-10,22;UBERON:0004638,1.21e-08,18;UBERON:0001986,1.21e-08,18;UBERON:0004852,1.21e-08,18;UBERON:0006914,7.88e-08,25;UBERON:0000926,9.73e-07,315;UBERON:0004120,9.73e-07,315;UBERON:0006603,9.73e-07,315 | |||
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| ||
|short_description=p3@ASL | |short_description=p3@ASL | ||
}} | }} |
Latest revision as of 05:50, 19 September 2015
Short description: | p3@ASL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000362000, ENST00000395331_5end |
EntrezGene: | ASL |
HGNC: | 746 |
UniProt: | F8W943E7EMI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.25e-09 | 24 |
vascular associated smooth muscle cell | 1.15e-08 | 32 |
blood vessel endothelial cell | 1.21e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-08 | 18 |
endothelial cell | 1.41e-08 | 36 |
mesodermal cell | 9.15e-08 | 121 |
meso-epithelial cell | 2.51e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.40e-17 | 68 |
epithelial tube | 5.73e-16 | 117 |
epithelial tube open at both ends | 1.08e-15 | 59 |
blood vessel | 1.08e-15 | 59 |
blood vasculature | 1.08e-15 | 59 |
vascular cord | 1.08e-15 | 59 |
splanchnic layer of lateral plate mesoderm | 1.65e-15 | 83 |
lateral plate mesoderm | 2.18e-15 | 203 |
artery | 9.12e-15 | 42 |
arterial blood vessel | 9.12e-15 | 42 |
arterial system | 9.12e-15 | 42 |
vasculature | 2.16e-12 | 78 |
vascular system | 2.16e-12 | 78 |
cardiovascular system | 1.03e-10 | 109 |
systemic artery | 1.08e-10 | 33 |
systemic arterial system | 1.08e-10 | 33 |
circulatory system | 1.27e-10 | 112 |
simple squamous epithelium | 9.90e-10 | 22 |
blood vessel endothelium | 1.21e-08 | 18 |
endothelium | 1.21e-08 | 18 |
cardiovascular system endothelium | 1.21e-08 | 18 |
squamous epithelium | 7.88e-08 | 25 |
mesoderm | 9.73e-07 | 315 |
mesoderm-derived structure | 9.73e-07 | 315 |
presumptive mesoderm | 9.73e-07 | 315 |