FFCP PHASE1:Hg19::chr2:103089782..103089791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389015 | |EntrezGene=389015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11077 | |HGNC=11077 | ||
|TSSclassifier=strong | |||
|UniProt=Q6AI14 | |UniProt=Q6AI14 | ||
|association_with_transcript=20bp_to_ENST00000295269,NM_001011552,uc002tbz.3_5end | |association_with_transcript=20bp_to_ENST00000295269,NM_001011552,uc002tbz.3_5end | ||
|cluster_id=chr2:103089782..103089791,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_1_at_SLC9A4_5end | |description=CAGE_peak_1_at_SLC9A4_5end | ||
|id=chr2:103089782..103089791,+ | |id=chr2:103089782..103089791,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2!CL:1000415;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.78e-26;1!UBERON:0003918;7.29e-11;10!UBERON:0007687;7.29e-11;10!UBERON:0003104;9.95e-08;31 | |||
|ontology_enrichment_disease=DOID:0050619!4.41e-08!1;DOID:1357!4.41e-08!1;DOID:5093!5.45e-08!4;DOID:1612!5.45e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002110!1.22e-10!3;UBERON:0006242!1.22e-10!3;UBERON:0002113!7.30e-09!27;UBERON:0003918!7.30e-09!27;UBERON:0005095!7.30e-09!27;UBERON:0007687!7.30e-09!27;UBERON:0007029!1.75e-08!1;UBERON:0000945!1.93e-08!8;UBERON:0010039!1.93e-08!8;UBERON:0001736!2.33e-08!1;UBERON:0006298!2.33e-08!1;UBERON:0000998!2.69e-08!1;UBERON:0006868!2.69e-08!1;UBERON:0001764!4.41e-08!1;UBERON:0001825!4.41e-08!1;UBERON:0000166!5.44e-08!21;UBERON:0002372!6.68e-08!1;UBERON:0001961!6.68e-08!1;UBERON:0001744!6.68e-08!1;UBERON:0001735!6.68e-08!1;UBERON:0000489!2.15e-07!32;UBERON:0005172!4.28e-07!55;UBERON:0005173!4.28e-07!55;UBERON:0006554!6.02e-07!44;UBERON:0003104!7.76e-07!238;UBERON:0009142!7.76e-07!238;UBERON:0001008!8.97e-07!45;UBERON:0009569!9.24e-07!113;UBERON:0003408!9.25e-07!10 | |ontology_enrichment_uberon=UBERON:0002110!1.22e-10!3;UBERON:0006242!1.22e-10!3;UBERON:0002113!7.30e-09!27;UBERON:0003918!7.30e-09!27;UBERON:0005095!7.30e-09!27;UBERON:0007687!7.30e-09!27;UBERON:0007029!1.75e-08!1;UBERON:0000945!1.93e-08!8;UBERON:0010039!1.93e-08!8;UBERON:0001736!2.33e-08!1;UBERON:0006298!2.33e-08!1;UBERON:0000998!2.69e-08!1;UBERON:0006868!2.69e-08!1;UBERON:0001764!4.41e-08!1;UBERON:0001825!4.41e-08!1;UBERON:0000166!5.44e-08!21;UBERON:0002372!6.68e-08!1;UBERON:0001961!6.68e-08!1;UBERON:0001744!6.68e-08!1;UBERON:0001735!6.68e-08!1;UBERON:0000489!2.15e-07!32;UBERON:0005172!4.28e-07!55;UBERON:0005173!4.28e-07!55;UBERON:0006554!6.02e-07!44;UBERON:0003104!7.76e-07!238;UBERON:0009142!7.76e-07!238;UBERON:0001008!8.97e-07!45;UBERON:0009569!9.24e-07!113;UBERON:0003408!9.25e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;5.98e-34;3!UBERON:0002294;3.40e-15;7!UBERON:0001173;3.40e-15;7!UBERON:0001041;5.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,9.10e-34,3;UBERON:0006242,9.10e-34,3;UBERON:0002294,5.52e-12,9;UBERON:0001173,5.52e-12,9;UBERON:0004912,5.52e-12,9;UBERON:0005172,9.26e-08,54;UBERON:0005173,9.26e-08,54;UBERON:0002417,5.10e-07,60;UBERON:0000916,5.10e-07,60 | |||
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|short_description=p1@SLC9A4 | |short_description=p1@SLC9A4 | ||
}} | }} |
Latest revision as of 02:42, 16 September 2015
Short description: | p1@SLC9A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC9A4_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 20bp_to_ENST00000295269, NM_001011552, uc002tbz.3_5end |
EntrezGene: | SLC9A4 |
HGNC: | 11077 |
UniProt: | Q6AI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 9.10e-34 | 3 |
gall bladder primordium | 9.10e-34 | 3 |
biliary system | 5.52e-12 | 9 |
biliary tree | 5.52e-12 | 9 |
biliary bud | 5.52e-12 | 9 |
abdomen element | 9.26e-08 | 54 |
abdominal segment element | 9.26e-08 | 54 |
abdominal segment of trunk | 5.10e-07 | 60 |
abdomen | 5.10e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.31e-07 | 4 |