FFCP PHASE1:Hg19::chr7:36450186..36450224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:36450186..36450224,+ | |||
|coexpression_cluster_id=C4687 | |||
|description=CAGE_peak_at_chr7:36450186..36450224,+ | |description=CAGE_peak_at_chr7:36450186..36450224,+ | ||
|id=chr7:36450186..36450224,+ | |id=chr7:36450186..36450224,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.84e-25!235;DOID:14566!2.47e-25!239;DOID:0050687!1.34e-18!143;DOID:305!2.31e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.07e-09,143;DOID:162,1.78e-08,235;DOID:14566,6.12e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-11!82;UBERON:0000073!1.04e-10!94;UBERON:0001016!1.04e-10!94;UBERON:0005743!1.93e-10!86;UBERON:0001049!9.33e-10!57;UBERON:0005068!9.33e-10!57;UBERON:0006241!9.33e-10!57;UBERON:0007135!9.33e-10!57;UBERON:0000955!2.62e-09!69;UBERON:0006238!2.62e-09!69;UBERON:0002020!2.77e-09!34;UBERON:0003528!2.77e-09!34;UBERON:0002791!2.42e-08!33;UBERON:0001893!4.18e-08!34;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0002780!5.03e-08!41;UBERON:0001890!5.03e-08!41;UBERON:0006240!5.03e-08!41;UBERON:0002346!7.85e-08!90;UBERON:0004121!1.13e-07!169;UBERON:0003080!1.65e-07!42;UBERON:0002616!1.77e-07!59;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0001869!2.18e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.78e-10;9!UBERON:0001557;3.78e-10;9!UBERON:0003528;2.02e-08;34!UBERON:0002020;2.02e-08;34!UBERON:0002791;6.10e-08;32!UBERON:0001869;4.18e-07;32!UBERON:0001893;4.75e-07;34!UBERON:0002780;7.30e-07;41!UBERON:0001890;7.30e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.93e-11,56;UBERON:0005068,3.93e-11,56;UBERON:0006241,3.93e-11,56;UBERON:0007135,3.93e-11,56;UBERON:0001737,9.08e-11,9;UBERON:0003528,2.30e-10,34;UBERON:0002020,2.30e-10,34;UBERON:0001017,3.20e-10,81;UBERON:0000073,7.03e-10,53;UBERON:0002616,7.03e-10,53;UBERON:0000955,3.44e-09,68;UBERON:0006238,3.44e-09,68;UBERON:0001016,4.74e-09,89;UBERON:0002780,1.03e-08,41;UBERON:0001890,1.03e-08,41;UBERON:0003080,1.03e-08,41;UBERON:0006240,1.03e-08,41;UBERON:0002791,1.24e-08,32;UBERON:0001893,7.62e-08,34;UBERON:0003075,1.60e-07,82;UBERON:0007284,1.60e-07,82;UBERON:0001869,2.21e-07,32;UBERON:0002346,2.42e-07,86 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,2.53299878168311,0,0,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0,1.34465029290355,0,0,0,0.246242116153576,0,0,0.85870796139317,2.32686522623903,2.13422487311165,0.0764134057479513,0.164201178899891,0.629686250509434,0,0,0.154816123316076,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,13.0118094858444,0,0.144846518960824,0,0,0.567208902984407,1.33037638477538,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,1.10047216776027,0.626984899610432,0,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.625098097988558,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,0.506522046658319,0,4.01571269048339,1.41867352879343,0.560677600142307,0,0,0,0.134710672069688,0.980771418680752,0,0,0,0.936480230490962,0,0.298897361103602,0.704606991862589,0.485618833104395,0.702254033511242,0,2.08818339430006,0,0,0.989067717114227,0,0,1.17835279767846,2.25213335769535,0,2.63386572528503,0,0.150238058906597,0.907457465280168,11.660326319776,0,0.211931901159562,3.30100205692843,0.824420233907511,1.54584324027377,0.18611685633159,4.38818463827292,0.487185025805993,5.80597680761463,0.184099797284599,0.161646056818812,2.4850671476163,1.30977727695932,2.7129694769678,0,0.818238361772504,0,1.21973706129595,0.530119073285941,0.813357600086629,1.14027160516907,1.26160425437814,2.18986415445498,0,0,0,0,0.721879481669586,2.83936320095625,1.85443159085912,2.41011029883482,2.86764329104224,1.52515610864684,1.42362371466658,2.96628877952362,2.35465758150415,2.30848294167834,0,0,0,0,0,0,0,0,0.614942192715568,0.514703430895577,0.109750285408626,0,1.60846355858609,0.0925884451585296,0,0,0,0.695582429850461,0,0.433099343283221,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0.503946384596579,0.425325291727159,2.32852159027406,5.52204483176528,0.766765358330422,0,0.176096868026452,0,0,0,0.825472625798197,0.381988425558278,1.17217447210047,0,0.822619941626588,0.600686115687835,0,0.112131084345361,0,2.0534720029866,0,0,2.535908257668,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.57191197463259,0,0.823240336780769,0.977208552881205,0.355391948742546,2.37585561880029,0,0,0.799783929456456,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0.179060963239896,0.784596007954691,0,0,0,0.76228387266739,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0,0.623912584592421,1.42743191037729,0.315404830067869,0.702848489956279,0,0,0,0.664225598535437,0.368738337083406,0.955719759148911,0,0,0.206768026122887,0,0,0.303127571446259,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,1.3878872442239,0.177561725313127,1.97105174433142,1.55776328755086,0.813472649219715,1.0877350463246,0,0,1.37777337797528,2.00300284807389,0.131124414959424,0.451199612907412,1.07821471946181,0,0,0.316654886678627,0,0.170093705276516,2.37507507712353,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0.103041011647722,1.09883357782012,0.247528499761764,0,0,0,0.096670718292122,0.462145851343933,1.38153307253517,1.65403886981437,0.644521469209642,0.435050081742686,0.511359764496605,0,0,0.192190067365106,1.14851441245126,0.10115778085555,0.929691098594572,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,1.116475108079,0.316379424718726,0,0,0.42793898803392,0,0,1.07923474549989,0.54907405947211,0.706874414074119,0,0,0,0.48763373908959,0,0,1.09199929126389,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,1.43411352204052,0,0,1.41904425628239,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,1.52927441428475,0.569647187174163,0,0,0,0,0.79312517629427,1.28188885352968,0,2.94048259177238,1.85803175125719,1.00988449083511,0.426851060090485,0.956557636372934,1.59663497146253,0.191505370132367,0.423347165447766,0.324621940274555,0.842391534340376,0.456469358066384,0.626719583092093,0,0.846458889008016,1.4452926759333,1.41259795033733,0.425846237690326,0.343505344755765,0.614481528616916,0.671028323677248,0.166849141711909,2.54004524022652,0.278406173895242,0,0,0,0,0.748562161632879,0,0.606802608747567,0.334330152832435,3.69376990848337,0.71623345421307,1.48482340416319,1.22864280839693,0.994147647766298,2.39138007897872,0.111308705022906,0.824019371133798,1.05562704063997,0,0,0.251932747854276,1.1249555075237,0.123084805461069,0,1.16828856491525,0.179021174675609,0.511572370226872,0,0,2.22273980289274,0.969332746095218,1.20598527610407,0,0.260427761085233,0,0,1.70690172428249,1.01701460117107,3.30942754475111,1.72371686620732,0.874813840149763,0.868124974666461,2.65722415744152,0.482385754501632,0,0.663475559587348,0.8866428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| ||
|short_description=p@chr7:36450186..36450224,+ | |short_description=p@chr7:36450186..36450224,+ | ||
}} | }} |
Latest revision as of 09:42, 31 July 2015
Short description: | p@chr7:36450186..36450224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:36450186..36450224, + |
Coexpression cluster: | C4687_spinal_mesothelioma_substantia_thalamus_mesenchymal_optic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.93e-11 | 56 |
neural rod | 3.93e-11 | 56 |
future spinal cord | 3.93e-11 | 56 |
neural keel | 3.93e-11 | 56 |
larynx | 9.08e-11 | 9 |
brain grey matter | 2.30e-10 | 34 |
gray matter | 2.30e-10 | 34 |
central nervous system | 3.20e-10 | 81 |
regional part of nervous system | 7.03e-10 | 53 |
regional part of brain | 7.03e-10 | 53 |
brain | 3.44e-09 | 68 |
future brain | 3.44e-09 | 68 |
nervous system | 4.74e-09 | 89 |
regional part of forebrain | 1.03e-08 | 41 |
forebrain | 1.03e-08 | 41 |
anterior neural tube | 1.03e-08 | 41 |
future forebrain | 1.03e-08 | 41 |
regional part of telencephalon | 1.24e-08 | 32 |
telencephalon | 7.62e-08 | 34 |
neural plate | 1.60e-07 | 82 |
presumptive neural plate | 1.60e-07 | 82 |
cerebral hemisphere | 2.21e-07 | 32 |
neurectoderm | 2.42e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.07e-09 | 143 |
cancer | 1.78e-08 | 235 |
disease of cellular proliferation | 6.12e-08 | 239 |