FFCP PHASE1:Hg19::chr22:42229210..42229229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6721 | |EntrezGene=6721 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11290 | |HGNC=11290 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBJ6 | |UniProt=E9PBJ6 | ||
|association_with_transcript=-24bp_to_ENST00000457567_5end | |association_with_transcript=-24bp_to_ENST00000457567_5end | ||
|cluster_id=chr22:42229210..42229229,+ | |||
|description=CAGE_peak_3_at_SREBF2_5end | |description=CAGE_peak_3_at_SREBF2_5end | ||
|id=chr22:42229210..42229229,+ | |id=chr22:42229210..42229229,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.03e-16!254;CL:0000220!1.33e-09!246;CL:0002321!1.34e-09!248;CL:0000223!7.82e-09!59;CL:0002076!3.18e-07!43 | |ontology_enrichment_celltype=CL:0000066!4.03e-16!254;CL:0000220!1.33e-09!246;CL:0002321!1.34e-09!248;CL:0000223!7.82e-09!59;CL:0002076!3.18e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-14,253;CL:0002321,2.16e-09,250;CL:0000223,8.04e-09,58;CL:0002076,3.08e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.09e-13!169;UBERON:0000925!6.09e-13!169;UBERON:0006595!6.09e-13!169;UBERON:0009569!3.83e-11!113;UBERON:0001007!7.72e-11!155;UBERON:0001555!7.72e-11!155;UBERON:0007026!7.72e-11!155;UBERON:0000481!5.25e-10!347;UBERON:0000475!7.83e-10!365;UBERON:0000077!1.69e-09!130;UBERON:0004921!5.32e-09!129;UBERON:0004185!5.32e-09!129;UBERON:0001004!1.29e-08!72;UBERON:0000064!1.56e-08!219;UBERON:0003104!6.20e-08!238;UBERON:0009142!6.20e-08!238;UBERON:0001041!6.43e-08!98;UBERON:0000063!6.47e-08!97;UBERON:0002417!7.77e-08!61;UBERON:0000916!7.77e-08!61;UBERON:0005177!1.33e-07!107;UBERON:0005172!2.39e-07!55;UBERON:0005173!2.39e-07!55;UBERON:0002365!2.74e-07!31;UBERON:0002330!2.74e-07!31;UBERON:0001737!3.44e-07!9;UBERON:0000065!3.72e-07!53;UBERON:0002100!3.89e-07!216;UBERON:0008947!5.45e-07!38;UBERON:0003258!5.45e-07!38;UBERON:0000119!9.92e-07!312 | |ontology_enrichment_uberon=UBERON:0004119!6.09e-13!169;UBERON:0000925!6.09e-13!169;UBERON:0006595!6.09e-13!169;UBERON:0009569!3.83e-11!113;UBERON:0001007!7.72e-11!155;UBERON:0001555!7.72e-11!155;UBERON:0007026!7.72e-11!155;UBERON:0000481!5.25e-10!347;UBERON:0000475!7.83e-10!365;UBERON:0000077!1.69e-09!130;UBERON:0004921!5.32e-09!129;UBERON:0004185!5.32e-09!129;UBERON:0001004!1.29e-08!72;UBERON:0000064!1.56e-08!219;UBERON:0003104!6.20e-08!238;UBERON:0009142!6.20e-08!238;UBERON:0001041!6.43e-08!98;UBERON:0000063!6.47e-08!97;UBERON:0002417!7.77e-08!61;UBERON:0000916!7.77e-08!61;UBERON:0005177!1.33e-07!107;UBERON:0005172!2.39e-07!55;UBERON:0005173!2.39e-07!55;UBERON:0002365!2.74e-07!31;UBERON:0002330!2.74e-07!31;UBERON:0001737!3.44e-07!9;UBERON:0000065!3.72e-07!53;UBERON:0002100!3.89e-07!216;UBERON:0008947!5.45e-07!38;UBERON:0003258!5.45e-07!38;UBERON:0000119!9.92e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.71e-08;9!UBERON:0001557;9.71e-08;9!UBERON:0000065;2.16e-07;44!UBERON:0002365;5.74e-07;31!UBERON:0002330;5.74e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.50e-14,160;UBERON:0000925,1.50e-14,160;UBERON:0006595,1.50e-14,160;UBERON:0001007,7.76e-12,145;UBERON:0001555,7.76e-12,145;UBERON:0007026,7.76e-12,145;UBERON:0009569,1.49e-10,112;UBERON:0004921,2.49e-10,118;UBERON:0001041,8.08e-10,87;UBERON:0011216,9.50e-09,223;UBERON:0002417,6.87e-08,60;UBERON:0000916,6.87e-08,60;UBERON:0001004,7.67e-08,74;UBERON:0001737,1.25e-07,9;UBERON:0005177,1.67e-07,101;UBERON:0005172,2.31e-07,54;UBERON:0005173,2.31e-07,54;UBERON:0000065,4.03e-07,54;UBERON:0002365,5.75e-07,31;UBERON:0002330,5.75e-07,31 | |||
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| ||
|short_description=p3@SREBF2 | |short_description=p3@SREBF2 | ||
}} | }} |
Latest revision as of 22:39, 24 September 2015
Short description: | p3@SREBF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SREBF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000457567_5end |
EntrezGene: | SREBF2 |
HGNC: | 11290 |
UniProt: | E9PBJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.03e-14 | 253 |
embryonic cell | 2.16e-09 | 250 |
endodermal cell | 8.04e-09 | 58 |
endo-epithelial cell | 3.08e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.50e-14 | 160 |
endoderm | 1.50e-14 | 160 |
presumptive endoderm | 1.50e-14 | 160 |
digestive system | 7.76e-12 | 145 |
digestive tract | 7.76e-12 | 145 |
primitive gut | 7.76e-12 | 145 |
subdivision of trunk | 1.49e-10 | 112 |
subdivision of digestive tract | 2.49e-10 | 118 |
foregut | 8.08e-10 | 87 |
organ system subdivision | 9.50e-09 | 223 |
abdominal segment of trunk | 6.87e-08 | 60 |
abdomen | 6.87e-08 | 60 |
respiratory system | 7.67e-08 | 74 |
larynx | 1.25e-07 | 9 |
trunk region element | 1.67e-07 | 101 |
abdomen element | 2.31e-07 | 54 |
abdominal segment element | 2.31e-07 | 54 |
respiratory tract | 4.03e-07 | 54 |
exocrine gland | 5.75e-07 | 31 |
exocrine system | 5.75e-07 | 31 |