FFCP PHASE1:Hg19::chr7:24797546..24797611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1687 | |EntrezGene=1687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2810 | |HGNC=2810 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSR4 | |UniProt=C9JSR4 | ||
|association_with_transcript=0bp_to_ENST00000414428_5end | |association_with_transcript=0bp_to_ENST00000414428_5end | ||
|cluster_id=chr7:24797546..24797611,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_DFNA5_5end | |description=CAGE_peak_2_at_DFNA5_5end | ||
|id=chr7:24797546..24797611,- | |id=chr7:24797546..24797611,- | ||
|ontology_enrichment_celltype=CL:0000548!1.11e-11!679;CL:0000004!1.11e-11!679;CL:0000255!1.11e-11!679;CL:0000012!3.45e-11!682;CL:0000055!1.57e-10!180;CL:0000144!2.26e-10!625;CL:0002371!3.44e-09!591;CL:0000860!4.80e-09!45;CL:0000220!4.83e-09!246;CL:0002321!1.16e-08!248;CL:0000057!1.51e-08!75;CL:0000359!3.29e-08!32;CL:0002057!5.46e-08!42;CL:0002009!7.46e-08!65;CL:0002194!1.01e-07!63;CL:0000576!1.01e-07!63;CL:0000040!1.01e-07!63;CL:0000559!1.01e-07!63;CL:0000063!8.05e-07!578 | |ontology_enrichment_celltype=CL:0000548!1.11e-11!679;CL:0000004!1.11e-11!679;CL:0000255!1.11e-11!679;CL:0000012!3.45e-11!682;CL:0000055!1.57e-10!180;CL:0000144!2.26e-10!625;CL:0002371!3.44e-09!591;CL:0000860!4.80e-09!45;CL:0000220!4.83e-09!246;CL:0002321!1.16e-08!248;CL:0000057!1.51e-08!75;CL:0000359!3.29e-08!32;CL:0002057!5.46e-08!42;CL:0002009!7.46e-08!65;CL:0002194!1.01e-07!63;CL:0000576!1.01e-07!63;CL:0000040!1.01e-07!63;CL:0000559!1.01e-07!63;CL:0000063!8.05e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-11;33!CL:0002057;1.49e-11;33!CL:0000473;1.55e-10;39!CL:0000234;1.55e-10;39!CL:0000359;7.51e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.05e-11,48;CL:0000234,9.05e-11,48;CL:0000860,1.66e-09,42;CL:0002057,1.66e-09,42;CL:0000359,5.27e-09,32;CL:0000057,2.57e-08,76;CL:0002194,1.57e-07,59;CL:0000576,1.57e-07,59;CL:0000040,1.57e-07,59;CL:0000559,1.57e-07,59;CL:0002009,2.09e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.52e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000467!2.88e-17!625;UBERON:0000480!3.65e-17!626;UBERON:0000468!8.86e-17!659;UBERON:0000923!2.99e-14!604;UBERON:0005291!2.99e-14!604;UBERON:0006598!2.99e-14!604;UBERON:0002532!2.99e-14!604;UBERON:0002050!5.52e-14!605;UBERON:0005423!5.52e-14!605;UBERON:0000922!5.59e-13!612;UBERON:0000062!3.25e-12!511;UBERON:0002204!1.87e-11!167;UBERON:0000926!5.93e-09!448;UBERON:0004120!5.93e-09!448;UBERON:0006603!5.93e-09!448;UBERON:0003102!1.44e-07!95;UBERON:0004765!1.60e-07!101;UBERON:0001434!1.60e-07!101;UBERON:0000486!2.70e-07!82;UBERON:0003081!3.40e-07!216;UBERON:0000914!4.82e-07!83;UBERON:0002329!4.82e-07!83;UBERON:0003077!4.82e-07!83;UBERON:0003059!4.82e-07!83;UBERON:0007282!4.82e-07!83;UBERON:0009618!4.82e-07!83;UBERON:0007285!4.82e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.29e-09,167;UBERON:0005423,1.80e-07,581;UBERON:0000922,2.97e-07,592;UBERON:0003102,7.02e-07,99 | |||
|phase1_expression=2.90685406832891,2.5692062866918,7.04772020479856,4.00293193412522,1.78784437770915,13.0850778615055,0,0.631719873426831,0,2.21160542851358,3.48900583986214,3.27662058195258,2.11013582582763,0.618831764800233,0,1.34465029290355,1.80808358407193,2.92124036154949,2.43966399395253,0.61560529038394,0.408001382488506,0.626909442956176,0.286235987131057,0.547497700291537,0.125542639594803,0.152826811495903,0.164201178899891,0,0,0.383829398097213,0.154816123316076,7.35536979583142,9.638589400904,5.54631015250181,0,0,0,4.9859586767869,3.81034450193269,1.30206522429511,1.11957737119962,0.971680998056939,0.77272670290256,0.726991193897824,4.53451132426571,0.970336244751265,5.34586784883075,11.1015329765893,10.5300166104335,5.17846306179871,5.63553554364021,5.20260905754887,30.3376199048224,23.2374486090177,12.1883837934908,2.63539275359647,5.73102915121476,5.16864014223695,24.1806274973013,44.9300637906531,35.1635419189473,0,1.59570926097305,1.70489900213078,89.6746547362325,125.392134656742,90.9320483533539,4.27122730936464,5.21482918420201,4.77815458351257,76.2803373318045,132.948226591511,81.6472959597482,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,2.1686349143074,2.00535164254356,0.869079113764942,0,2.91980922181582,1.13441780596881,0.665188192387692,0.527008714158756,0.130979075497713,2.18577172975525,7.41568885568859,0,0.174129737299267,0.26591592103773,0,0.571994910780128,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.419499436209906,0.825354125820202,1.04497483268405,1.03366703667732,0.35576626268671,0,1.20848795132744,0,0,0,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0.549605231791222,0,0,6.10531672999548,2.98183171017191,1.77282716330412,6.88527740228738,1.72101972449288,1.06400514659507,2.80338800071154,2.1349799145941,4.68668341992604,0.622422070799533,1.0776853765575,0.653847612453835,0.302714855289863,0,1.40592859100278,1.5608003841516,2.2818872861778,1.49448680551801,0.822041490506354,0.647491777472526,0.702254033511242,1.22492502752936,3.31652656741774,0.619954687054593,2.37600571456411,2.22540236350701,2.73048408581408,1.43723628363248,4.71341119071385,3.1279629967991,1.10825646193673,2.19488810440419,2.75839016219118,3.60571341375832,2.38207584636044,4.84352016359927,1.92201649936711,2.96704661623387,3.60109315301283,1.33968288009971,2.31876486041066,1.8611685633159,3.37552664482532,3.41029518064195,6.05841058185875,1.01254888506529,1.77810662500693,2.13005755509969,2.11579406278045,4.0694542154517,11.5956511897978,7.63689137654337,6.59650569394709,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,3.12899064659632,1.28648187638577,9.66944449467364,1.39310378409594,1.44375896333917,3.90412440131485,5.05754070234305,4.82022059766964,4.52205288202815,3.05031221729369,6.40630671599961,4.58426447744559,4.12065076763227,2.69323009862473,0,2.80483547606892,2.8810180793198,0,0,0,0,0,1.22988438543114,0.171567810298526,5.5972645558399,8.99214026060957,7.33861498604905,5.18495292887766,0.325808305310325,0,1.44331342025273,1.04337364477569,1.29149563659404,0.144366447761074,0.925971025153221,0.570762456703795,0,0,1.96973604869918,3.27605971194933,2.0808362720422,8.43604505880993,5.87937448696008,9.07360622351273,6.08997954379368,8.13775027839093,6.9008882249738,0.492663237895943,0,0,0.144119953416961,0.12624243342638,2.47641787739459,3.05590740446622,2.34434894420094,0,0.719792448923265,2.70308752059526,0,0.897048674762886,0,0.2933531432838,1.93907573636667,0,0.845302752556,1.59562869950922,3.12022310734098,1.28603687131071,4.25547396069835,3.19706614819319,0.57191197463259,0.542621605391443,4.93944202068461,0.977208552881205,1.42156779497018,3.95975936466715,3.01439377059586,6.97226766880235,8.09781228574662,1.2162378064119,2.00902836572851,4.21667878966063,2.87549826589899,1.14861935834114,0,1.59259437334337,1.02738161275192,1.43248770591916,0,0.197030760201927,0,0,1.77866236955724,2.60279707715243,1.54657762555539,2.17771144934653,1.27587750330633,0,0,0,0.24538298343828,0,0.542530047399471,3.53550464602372,3.21172179834891,1.57702415033935,2.45996971484698,0.601892199455438,0,1.03473071292505,1.99267679560631,1.65932251687533,1.21637060255316,0,0,0,1.07857100409308,1.28073069364133,5.15316871458641,0,3.0239029332968,3.72161711728165,5.52463103837025,4.49056151092918,9.09787959715477,6.14048698880044,7.72098821489316,7.42090332224955,1.54209693802656,0.532685175939381,1.06765302817952,3.11552657510173,0.697262270759755,0.241718899183244,6.01519410909855,4.23572549105123,1.83703117063371,1.63882051206045,0.524497659837696,3.15839729035188,2.38747545023686,2.35304930753057,5.84556898613043,2.00548094896464,0,1.02056223165909,1.29549549661284,0,1.08378575017541,0,7.13653564526107,8.31076008928724,4.02974558499921,0,0,2.3080511260475,1.31205858279882,3.904540735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| ||
|short_description=p2@DFNA5 | |short_description=p2@DFNA5 | ||
}} | }} |
Latest revision as of 21:40, 17 September 2015
Short description: | p2@DFNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DFNA5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000414428_5end |
EntrezGene: | DFNA5 |
HGNC: | 2810 |
UniProt: | C9JSR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.05e-11 | 48 |
phagocyte | 9.05e-11 | 48 |
classical monocyte | 1.66e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-09 | 42 |
vascular associated smooth muscle cell | 5.27e-09 | 32 |
fibroblast | 2.57e-08 | 76 |
monopoietic cell | 1.57e-07 | 59 |
monocyte | 1.57e-07 | 59 |
monoblast | 1.57e-07 | 59 |
promonocyte | 1.57e-07 | 59 |
macrophage dendritic cell progenitor | 2.09e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.29e-09 | 167 |
developing anatomical structure | 1.80e-07 | 581 |
embryo | 2.97e-07 | 592 |
surface structure | 7.02e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.52e-07 | 14 |