FFCP PHASE1:Hg19::chr7:24797517..24797528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1687 | |EntrezGene=1687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2810 | |HGNC=2810 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSR4 | |UniProt=C9JSR4 | ||
|association_with_transcript=30bp_to_ENST00000414428_5end | |association_with_transcript=30bp_to_ENST00000414428_5end | ||
|cluster_id=chr7:24797517..24797528,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_DFNA5_5end | |description=CAGE_peak_6_at_DFNA5_5end | ||
|id=chr7:24797517..24797528,- | |id=chr7:24797517..24797528,- | ||
|ontology_enrichment_celltype=CL:0002009!4.44e-14!65;CL:0000860!7.29e-14!45;CL:0002194!1.09e-13!63;CL:0000576!1.09e-13!63;CL:0000040!1.09e-13!63;CL:0000559!1.09e-13!63;CL:0002057!3.81e-12!42;CL:0000557!5.20e-12!71;CL:0000839!2.55e-11!70;CL:0000766!1.14e-09!76 | |ontology_enrichment_celltype=CL:0002009!4.44e-14!65;CL:0000860!7.29e-14!45;CL:0002194!1.09e-13!63;CL:0000576!1.09e-13!63;CL:0000040!1.09e-13!63;CL:0000559!1.09e-13!63;CL:0002057!3.81e-12!42;CL:0000557!5.20e-12!71;CL:0000839!2.55e-11!70;CL:0000766!1.14e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.73e-31;33!CL:0002057;4.73e-31;33!CL:0000473;7.13e-22;39!CL:0000234;7.13e-22;39!CL:0000576;1.11e-13;48!CL:0000766;1.14e-11;69!CL:0002581;2.33e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.29e-30,42;CL:0002057,2.29e-30,42;CL:0000473,3.12e-26,48;CL:0000234,3.12e-26,48;CL:0002194,1.92e-20,59;CL:0000576,1.92e-20,59;CL:0000040,1.92e-20,59;CL:0000559,1.92e-20,59;CL:0002009,1.07e-19,61;CL:0000839,5.05e-18,66;CL:0000557,1.02e-17,67;CL:0000766,2.56e-16,72;CL:0000763,4.93e-10,108;CL:0000049,4.93e-10,108;CL:0002087,2.88e-09,115;CL:0002031,8.98e-09,120;CL:0002581,2.17e-08,1;CL:0000738,1.94e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-20;42!UBERON:0005425;4.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;4.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.71e-10!80;UBERON:0001474!6.88e-09!86;UBERON:0004765!2.25e-08!101;UBERON:0001434!2.25e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.40e-08;1!UBERON:0000941;4.40e-08;1!UBERON:0001785;4.40e-08;1!UBERON:0002464;4.40e-08;1!UBERON:0004904;4.40e-08;1!UBERON:0001021;4.40e-08;1!UBERON:0005208;4.40e-08;1!UBERON:0004145;4.40e-08;1!UBERON:0005946;4.40e-08;1!UBERON:0005965;4.40e-08;1!UBERON:0002078;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-15,76;UBERON:0001474,5.03e-14,82;UBERON:0004765,1.49e-12,90;UBERON:0002405,4.58e-12,93;UBERON:0002390,2.55e-11,98;UBERON:0003061,2.55e-11,98;UBERON:0001434,4.83e-11,100;UBERON:0002193,4.93e-10,108;UBERON:0002134,3.33e-08,1;UBERON:0005208,3.33e-08,1;UBERON:0005946,3.33e-08,1;UBERON:0005965,3.33e-08,1;UBERON:0002078,3.33e-08,1;UBERON:0000941,3.57e-08,1;UBERON:0001785,3.57e-08,1;UBERON:0002464,3.57e-08,1;UBERON:0004904,3.57e-08,1;UBERON:0001021,3.57e-08,1;UBERON:0003902,3.57e-08,1;UBERON:0005425,3.57e-08,1;UBERON:0003081,1.35e-07,203 | |||
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| ||
|short_description=p6@DFNA5 | |short_description=p6@DFNA5 | ||
}} | }} |
Latest revision as of 21:38, 17 September 2015
Short description: | p6@DFNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DFNA5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 30bp_to_ENST00000414428_5end |
EntrezGene: | DFNA5 |
HGNC: | 2810 |
UniProt: | C9JSR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.29e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-30 | 42 |
defensive cell | 3.12e-26 | 48 |
phagocyte | 3.12e-26 | 48 |
monopoietic cell | 1.92e-20 | 59 |
monocyte | 1.92e-20 | 59 |
monoblast | 1.92e-20 | 59 |
promonocyte | 1.92e-20 | 59 |
macrophage dendritic cell progenitor | 1.07e-19 | 61 |
myeloid lineage restricted progenitor cell | 5.05e-18 | 66 |
granulocyte monocyte progenitor cell | 1.02e-17 | 67 |
myeloid leukocyte | 2.56e-16 | 72 |
myeloid cell | 4.93e-10 | 108 |
common myeloid progenitor | 4.93e-10 | 108 |
nongranular leukocyte | 2.88e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.98e-09 | 120 |
perirenal preadipocyte | 2.17e-08 | 1 |
leukocyte | 1.94e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-15 | 76 |
bone element | 5.03e-14 | 82 |
skeletal element | 1.49e-12 | 90 |
immune system | 4.58e-12 | 93 |
hematopoietic system | 2.55e-11 | 98 |
blood island | 2.55e-11 | 98 |
skeletal system | 4.83e-11 | 100 |
hemolymphoid system | 4.93e-10 | 108 |
tricuspid valve | 3.33e-08 | 1 |
right atrium valve | 3.33e-08 | 1 |
outflow tract of atrium | 3.33e-08 | 1 |
outflow part of right atrium | 3.33e-08 | 1 |
right cardiac atrium | 3.33e-08 | 1 |
cranial nerve II | 3.57e-08 | 1 |
cranial nerve | 3.57e-08 | 1 |
nerve trunk | 3.57e-08 | 1 |
nerve connecting eye with brain | 3.57e-08 | 1 |
nerve | 3.57e-08 | 1 |
retinal neural layer | 3.57e-08 | 1 |
presumptive neural retina | 3.57e-08 | 1 |
lateral plate mesoderm | 1.35e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 3.10e-08 | 1 |