FFCP PHASE1:Hg19::chr7:23507538..23507550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10643 | |EntrezGene=10643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28868 | |HGNC=28868 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468263_5end | |association_with_transcript=0bp_to_ENST00000468263_5end | ||
|cluster_id=chr7:23507538..23507550,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_10_at_IGF2BP3_5end | |description=CAGE_peak_10_at_IGF2BP3_5end | ||
|id=chr7:23507538..23507550,- | |id=chr7:23507538..23507550,- | ||
|ontology_enrichment_celltype=CL:0000066!1.17e-09!254;CL:0002251!2.36e-08!21;CL:0000223!5.92e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.17e-09!254;CL:0002251!2.36e-08!21;CL:0000223!5.92e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1!CL:0002563;6.24e-10;4!CL:0002251;2.19e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.73e-10,1;CL:1000600,1.73e-10,1;CL:0002563,4.98e-10,4;CL:0002251,2.08e-07,20;CL:0002076,2.67e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.72e-11;1 | |||
|ontology_enrichment_disease=DOID:305!1.68e-12!106;DOID:0050687!4.09e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.73e-12!57;UBERON:0004119!1.41e-10!169;UBERON:0000925!1.41e-10!169;UBERON:0006595!1.41e-10!169;UBERON:0001007!8.31e-09!155;UBERON:0001555!8.31e-09!155;UBERON:0007026!8.31e-09!155;UBERON:0005631!1.49e-08!14;UBERON:0000158!1.49e-08!14;UBERON:0007625!1.80e-07!11;UBERON:0000344!1.93e-07!12;UBERON:0000077!2.87e-07!130;UBERON:0001444!3.04e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0003350;1.11e-10;8!UBERON:0004645;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1!UBERON:0001987;3.30e-10;4!UBERON:0001052;4.15e-10;4!UBERON:0001242;6.24e-10;4!UBERON:0001262;6.24e-10;4!UBERON:0004786;6.24e-10;4!UBERON:0004808;6.24e-10;4!UBERON:0001277;6.24e-10;4!UBERON:0004907;2.93e-08;5!UBERON:0000344;2.19e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.14e-12,7;UBERON:0003350,8.23e-11,8;UBERON:0004645,1.73e-10,1;UBERON:0001256,1.73e-10,1;UBERON:0001259,1.73e-10,1;UBERON:0001987,2.39e-10,4;UBERON:0004340,2.39e-10,4;UBERON:0001052,3.97e-10,4;UBERON:0001242,4.98e-10,4;UBERON:0001262,4.98e-10,4;UBERON:0004786,4.98e-10,4;UBERON:0004808,4.98e-10,4;UBERON:0001277,4.98e-10,4;UBERON:0004907,2.83e-08,5;UBERON:0004923,8.86e-08,66;UBERON:0000344,1.84e-07,20;UBERON:0000995,3.06e-07,21;UBERON:0005795,6.46e-07,22;UBERON:0003975,6.46e-07,22 | |||
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| ||
|short_description=p10@IGF2BP3 | |short_description=p10@IGF2BP3 | ||
}} | }} |
Latest revision as of 20:47, 17 September 2015
Short description: | p10@IGF2BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IGF2BP3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000468263_5end |
EntrezGene: | IGF2BP3 |
HGNC: | 28868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.73e-10 | 1 |
lower urinary tract cell | 1.73e-10 | 1 |
intestinal epithelial cell | 4.98e-10 | 4 |
epithelial cell of alimentary canal | 2.08e-07 | 20 |
endo-epithelial cell | 2.67e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.14e-12 | 7 |
epithelium of mucosa | 8.23e-11 | 8 |
urinary bladder urothelium | 1.73e-10 | 1 |
wall of urinary bladder | 1.73e-10 | 1 |
mucosa of urinary bladder | 1.73e-10 | 1 |
placenta | 2.39e-10 | 4 |
allantois | 2.39e-10 | 4 |
rectum | 3.97e-10 | 4 |
intestinal mucosa | 4.98e-10 | 4 |
wall of intestine | 4.98e-10 | 4 |
gastrointestinal system mucosa | 4.98e-10 | 4 |
gastrointestinal system epithelium | 4.98e-10 | 4 |
intestinal epithelium | 4.98e-10 | 4 |
lower digestive tract | 2.83e-08 | 5 |
organ component layer | 8.86e-08 | 66 |
mucosa | 1.84e-07 | 20 |
uterus | 3.06e-07 | 21 |
embryonic uterus | 6.46e-07 | 22 |
internal female genitalia | 6.46e-07 | 22 |