FFCP PHASE1:Hg19::chr22:33254010..33254022,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:33254010..33254022,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr22:33254010..33254022,+ | |description=CAGE_peak_at_chr22:33254010..33254022,+ | ||
|id=chr22:33254010..33254022,+ | |id=chr22:33254010..33254022,+ | ||
|ontology_enrichment_celltype=CL:0002334!1.13e-08!12;CL:0000057!2.26e-08!75 | |ontology_enrichment_celltype=CL:0002334!1.13e-08!12;CL:0000057!2.26e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.73e-11;12!CL:0002541;9.02e-11;3!CL:0000346;5.29e-09;3!CL:1000428;5.29e-09;3!CL:0002593;1.61e-07;2!CL:0002583;2.89e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.56e-11,3;CL:0002334,1.04e-10,12;CL:0000346,4.19e-09,3;CL:1000428,4.19e-09,3;CL:0002593,1.38e-07,2;CL:0002583,3.50e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.85e-07;4!UBERON:0007284;2.85e-07;4!UBERON:0007297;6.73e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.81e-11!115;UBERON:0004923!1.26e-08!57 | |ontology_enrichment_uberon=UBERON:0007023!7.81e-11!115;UBERON:0004923!1.26e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.91e-11;10!UBERON:0000158;4.91e-11;10!UBERON:0003124;9.02e-11;3!UBERON:0000920;9.02e-11;3!UBERON:0006947;2.37e-09;3!UBERON:0004054;2.37e-09;3!UBERON:0000412;5.29e-09;3!UBERON:0001992;5.29e-09;3!UBERON:0002456;1.61e-07;2!UBERON:0005904;4.15e-07;4!UBERON:0005406;6.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.56e-11,3;UBERON:0005631,3.14e-10,14;UBERON:0000158,3.14e-10,14;UBERON:0006947,2.43e-09,3;UBERON:0004054,2.43e-09,3;UBERON:0000412,4.19e-09,3;UBERON:0001992,4.19e-09,3;UBERON:0004923,9.51e-08,66;UBERON:0003124,1.14e-07,7;UBERON:0002456,1.38e-07,2;UBERON:0005904,4.22e-07,4;UBERON:0005406,4.87e-07,2 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.281908808191942,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,0,0,1.31064823278103,0.527533956456907,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,3.47880366186723,0.12663051166458,0.397227542439656,1.43418310374407,0,0,0,0.49333509683432,0,0,0,0,0,1.17160715916898,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.619954687054593,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0.213557388818567,0.635795703478686,0.900273288253207,0.92747276314595,0.257640540045629,0.37223371266318,1.18143432568886,0.194874010322397,0.757301322732344,0.184099797284599,1.13152239773168,1.77504796258307,0.302256294682921,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,1.00883967391873,0.25248486685276,0,1.52795370223311,0,0,0.205654985406647,3.60411669412701,0.571652865261156,0.336393253036082,0.43596006883328,0.2933531432838,0.904902010304444,0,0.845302752556,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,1.37257369524342,0,0,0,0,0,0.907170879989041,0.744323423456331,0.306923946576125,1.68396056659844,0.512556597022804,1.02341449813341,0.965123526861645,1.48418066444991,2.15893571323718,2.30830242907065,0.0821271560138091,1.03850885836724,1.27831416305955,0,0.40101294060657,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0.30347334256665,0.464845549297286,4.7221852024596,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.255897791311334,2.56763392820352,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,2.92456187557541,10.5650146756755,0,0.141405431953713,0,0.551365343546124,0.66343897524122,2.19225442626881,0,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0.354761064070598,0.844430541190656,2.30506425071931,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.73254089635947,0,0,0,5.25237866422918,0.593929361665277,2.45728561679386,0.994147647766298,0,0,0,0.211125408127993,0.996239941255349,0.828851746593443,0,0.20453736500431,0,4.97663340258892,0,0,0,0.591860433821602,0,0,0,0.371072392647405,0,0.520855522170466,0,1.44999915086959,0.1137934482855,0,0.945550727071745,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.692552326534174,0,0,0,0,10.5270382711533,4.30508688988753,34.1142256651926,0,0,0.498635045700469,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,1.18375320854817,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.293977192243133,0,1.39781334593624,0,0,0,0,0.581934098930517,0,1.35588444468319,0,0,0.0633107959558787,0,0,0.85381197895741,1.19885765749278,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0.917983958726896,0,0,0.136905378891993,0,0,0,9.49560164325664,1.14580212005842,0.717873024576814,0.399358000997982,0.858452096273142,0.89268582976749,0.53746777989381,0.360299883542404,0,0.236349546921671,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0.670869375198532,0.394028536495991,0.157363764404994,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.679872549120754,0.293104467356165,0,0,0.13223260174269,0,0,1.9221734262185,0.314408610199332,3.31391244277756,0.496166021811951,0,0,0,0,0.7520696820681,0.612691153526923,0.655745261419609,0,0,0.244052529803926,0,0.573409195690071,0.332787154610557,0,0.138348634936231,0,0.151649117541648,0.285465333544967,6.58744295154881,0,0,0.74627401443437,0,0.554805861502613,0.189403005275089,0.754703705257725,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0.829412415681711,1.06336685823198,1.5652351854352,0.450772826991655,3.80805212168795,1.22061219961398,0.181848659202559,0.214821114084977,0,1.99047944349308,0,1.37358282073117,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0.558644917973244,1.59002175326709,0,0,1.76337971845342,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0,0.161475645631851,0,0,0,0.366857197043358,0,0,0,0,0.300841313397029,0.60511520611056,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,2.97726707033577,0,0,0,0,0.606965604236632,0,2.21755925406597,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,0,0.39246546425257,0,0.280272163313789,0,0,0,1.1436247068265,0,0,0.521574816907738,0,0,0.3414369541879,0.691259661814092,0,0,0,2.9637093513365,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.980593287015622,0,0.196308467114945,0,0,7.64672016095176,0.563903507879121,0.515663103788617,0,0.178553938605658,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0,0.0679914901909147,0,1.5870805215462,0.743990036333503,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0.20686599172379,0.426467963801962,0.476128862927481,0,0.0620747142958579,0.112131862580613,0.25458863311266,0.808468755832877,1.52401723527873,0,0.134704106029175,0.143444410785353,0.99798106963804,0,0,1.9307228228694,0.0898252021065869,0,0.366724332548599,0.406896178315738,0,0.805095174364105,0 | |phase1_expression=0.726713517082227,1.07050261945492,0.281908808191942,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,0,0,1.31064823278103,0.527533956456907,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,3.47880366186723,0.12663051166458,0.397227542439656,1.43418310374407,0,0,0,0.49333509683432,0,0,0,0,0,1.17160715916898,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.619954687054593,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0.213557388818567,0.635795703478686,0.900273288253207,0.92747276314595,0.257640540045629,0.37223371266318,1.18143432568886,0.194874010322397,0.757301322732344,0.184099797284599,1.13152239773168,1.77504796258307,0.302256294682921,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,1.00883967391873,0.25248486685276,0,1.52795370223311,0,0,0.205654985406647,3.60411669412701,0.571652865261156,0.336393253036082,0.43596006883328,0.2933531432838,0.904902010304444,0,0.845302752556,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,1.37257369524342,0,0,0,0,0,0.907170879989041,0.744323423456331,0.306923946576125,1.68396056659844,0.512556597022804,1.02341449813341,0.965123526861645,1.48418066444991,2.15893571323718,2.30830242907065,0.0821271560138091,1.03850885836724,1.27831416305955,0,0.40101294060657,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0.30347334256665,0.464845549297286,4.7221852024596,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.255897791311334,2.56763392820352,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,2.92456187557541,10.5650146756755,0,0.141405431953713,0,0.551365343546124,0.66343897524122,2.19225442626881,0,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0.354761064070598,0.844430541190656,2.30506425071931,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.73254089635947,0,0,0,5.25237866422918,0.593929361665277,2.45728561679386,0.994147647766298,0,0,0,0.211125408127993,0.996239941255349,0.828851746593443,0,0.20453736500431,0,4.97663340258892,0,0,0,0.591860433821602,0,0,0,0.371072392647405,0,0.520855522170466,0,1.44999915086959,0.1137934482855,0,0.945550727071745,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.692552326534174,0,0,0,0,10.5270382711533,4.30508688988753,34.1142256651926,0,0,0.498635045700469,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,1.18375320854817,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.293977192243133,0,1.39781334593624,0,0,0,0,0.581934098930517,0,1.35588444468319,0,0,0.0633107959558787,0,0,0.85381197895741,1.19885765749278,0,0,0.171594997861965,0,0,0.471388069233591,0,0,0.917983958726896,0,0,0.136905378891993,0,0,0,9.49560164325664,1.14580212005842,0.717873024576814,0.399358000997982,0.858452096273142,0.89268582976749,0.53746777989381,0.360299883542404,0,0.236349546921671,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0.670869375198532,0.394028536495991,0.157363764404994,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.679872549120754,0.293104467356165,0,0,0.13223260174269,0,0,1.9221734262185,0.314408610199332,3.31391244277756,0.496166021811951,0,0,0,0,0.7520696820681,0.612691153526923,0.655745261419609,0,0,0.244052529803926,0,0.573409195690071,0.332787154610557,0,0.138348634936231,0,0.151649117541648,0.285465333544967,6.58744295154881,0,0,0.74627401443437,0,0.554805861502613,0.189403005275089,0.754703705257725,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0.829412415681711,1.06336685823198,1.5652351854352,0.450772826991655,3.80805212168795,1.22061219961398,0.181848659202559,0.214821114084977,0,1.99047944349308,0,1.37358282073117,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0.558644917973244,1.59002175326709,0,0,1.76337971845342,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0,0.161475645631851,0,0,0,0.366857197043358,0,0,0,0,0.300841313397029,0.60511520611056,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,2.97726707033577,0,0,0,0,0.606965604236632,0,2.21755925406597,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,0,0.39246546425257,0,0.280272163313789,0,0,0,1.1436247068265,0,0,0.521574816907738,0,0,0.3414369541879,0.691259661814092,0,0,0,2.9637093513365,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.980593287015622,0,0.196308467114945,0,0,7.64672016095176,0.563903507879121,0.515663103788617,0,0.178553938605658,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0,0.0679914901909147,0,1.5870805215462,0.743990036333503,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0.20686599172379,0.426467963801962,0.476128862927481,0,0.0620747142958579,0.112131862580613,0.25458863311266,0.808468755832877,1.52401723527873,0,0.134704106029175,0.143444410785353,0.99798106963804,0,0,1.9307228228694,0.0898252021065869,0,0.366724332548599,0.406896178315738,0,0.805095174364105,0 | ||
|short_description=p@chr22:33254010..33254022,+ | |short_description=p@chr22:33254010..33254022,+ | ||
}} | }} |
Latest revision as of 20:28, 28 July 2015
Short description: | p@chr22:33254010..33254022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:33254010..33254022, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.56e-11 | 3 |
preadipocyte | 1.04e-10 | 12 |
hair follicle dermal papilla cell | 4.19e-09 | 3 |
stem cell of epidermis | 4.19e-09 | 3 |
smooth muscle cell of the internal thoracic artery | 1.38e-07 | 2 |
subcutaneous preadipocyte | 3.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.56e-11 | 3 |
extraembryonic membrane | 3.14e-10 | 14 |
membranous layer | 3.14e-10 | 14 |
male genital duct | 2.43e-09 | 3 |
internal male genitalia | 2.43e-09 | 3 |
dermal papilla | 4.19e-09 | 3 |
papillary layer of dermis | 4.19e-09 | 3 |
organ component layer | 9.51e-08 | 66 |
chorion | 1.14e-07 | 7 |
internal thoracic artery | 1.38e-07 | 2 |
duct of male reproductive system | 4.22e-07 | 4 |
perirenal fat | 4.87e-07 | 2 |