FFCP PHASE1:Hg19::chr7:155754027..155754046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:155754027..155754046,+ | |||
|coexpression_cluster_id=C794 | |||
|description=CAGE_peak_at_chr7:155754027..155754046,+ | |description=CAGE_peak_at_chr7:155754027..155754046,+ | ||
|id=chr7:155754027..155754046,+ | |id=chr7:155754027..155754046,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.51e-10!12;CL:0000417!3.51e-10!12;CL:0000668!3.51e-10!12;CL:0000414!3.51e-10!12;CL:0000412!3.51e-10!12;CL:0000182!3.51e-10!12 | |ontology_enrichment_celltype=CL:0000181!3.51e-10!12;CL:0000417!3.51e-10!12;CL:0000668!3.51e-10!12;CL:0000414!3.51e-10!12;CL:0000412!3.51e-10!12;CL:0000182!3.51e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.17e-31;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.17e-31,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.59e-22;11!UBERON:0009497;4.00e-19;13!UBERON:0006242;6.47e-17;1!UBERON:0001045;2.63e-16;1!UBERON:0003104;8.47e-08;31 | |||
|ontology_enrichment_disease=DOID:3493!1.01e-10!2;DOID:4929!1.17e-10!2;DOID:299!1.50e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.70e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.70e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.40e-14!35;UBERON:0005172!1.08e-13!55;UBERON:0005173!1.08e-13!55;UBERON:0000160!1.53e-12!27;UBERON:0009854!2.11e-12!23;UBERON:0002417!4.74e-12!61;UBERON:0000916!4.74e-12!61;UBERON:0009497!2.29e-11!25;UBERON:0000015!2.29e-11!25;UBERON:0002423!2.29e-11!25;UBERON:0006235!2.29e-11!25;UBERON:0004161!2.29e-11!25;UBERON:0002108!4.38e-11!14;UBERON:0009856!8.07e-11!26;UBERON:0005177!4.48e-10!107;UBERON:0008835!5.17e-10!22;UBERON:0003894!5.17e-10!22;UBERON:0002114!5.12e-09!12;UBERON:0002107!9.73e-09!19;UBERON:0006925!9.73e-09!19;UBERON:0008836!9.73e-09!19;UBERON:0007499!1.08e-08!25;UBERON:0004921!6.20e-08!129;UBERON:0004185!6.20e-08!129;UBERON:0002113!2.65e-07!27;UBERON:0003918!2.65e-07!27;UBERON:0005095!2.65e-07!27;UBERON:0007687!2.65e-07!27;UBERON:0000949!3.99e-07!45;UBERON:0001045!4.69e-07!11;UBERON:0001007!7.05e-07!155;UBERON:0001555!7.05e-07!155;UBERON:0007026!7.05e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.31e-21;25!UBERON:0002107;6.86e-20;19!UBERON:0006925;6.86e-20;19!UBERON:0001154;2.63e-16;1!UBERON:0001153;2.63e-16;1!UBERON:0009854;2.63e-16;1!UBERON:0000160;5.88e-14;17!UBERON:0002108;2.37e-13;4!UBERON:0002365;9.00e-12;31!UBERON:0002330;9.00e-12;31!UBERON:0005409;5.45e-11;22!UBERON:0002368;6.38e-11;33!UBERON:0001007;3.48e-09;81!UBERON:0000949;1.28e-08;43!UBERON:0001155;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.52e-23,23;UBERON:0009497,1.31e-21,25;UBERON:0000015,1.31e-21,25;UBERON:0002423,1.31e-21,25;UBERON:0006235,1.31e-21,25;UBERON:0004161,1.31e-21,25;UBERON:0009856,1.27e-20,26;UBERON:0002107,6.86e-20,19;UBERON:0006925,6.86e-20,19;UBERON:0008836,6.86e-20,19;UBERON:0008835,3.41e-17,22;UBERON:0003894,3.41e-17,22;UBERON:0001154,3.07e-16,1;UBERON:0001153,3.07e-16,1;UBERON:0001045,3.07e-16,1;UBERON:0007499,3.84e-15,25;UBERON:0000160,6.29e-14,17;UBERON:0002108,2.52e-13,4;UBERON:0002365,3.19e-12,31;UBERON:0002330,3.19e-12,31;UBERON:0002368,7.90e-11,35;UBERON:0003929,6.66e-10,54;UBERON:0005172,6.66e-10,54;UBERON:0005173,6.66e-10,54;UBERON:0005409,9.83e-10,25;UBERON:0004921,1.53e-09,118;UBERON:0001007,1.69e-09,145;UBERON:0001555,1.69e-09,145;UBERON:0007026,1.69e-09,145;UBERON:0002417,6.92e-09,60;UBERON:0000916,6.92e-09,60;UBERON:0004119,1.62e-08,160;UBERON:0000925,1.62e-08,160;UBERON:0006595,1.62e-08,160;UBERON:0000949,2.02e-08,45;UBERON:0001155,1.05e-07,9 | |||
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|short_description=p@chr7:155754027..155754046,+ | |short_description=p@chr7:155754027..155754046,+ | ||
}} | }} |
Latest revision as of 07:58, 31 July 2015
Short description: | p@chr7:155754027..155754046, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:155754027..155754046, + |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.17e-31 | 12 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.52e-23 | 23 |
epithelium of foregut-midgut junction | 1.31e-21 | 25 |
anatomical boundary | 1.31e-21 | 25 |
hepatobiliary system | 1.31e-21 | 25 |
foregut-midgut junction | 1.31e-21 | 25 |
septum transversum | 1.31e-21 | 25 |
sac | 1.27e-20 | 26 |
liver | 6.86e-20 | 19 |
digestive gland | 6.86e-20 | 19 |
liver bud | 6.86e-20 | 19 |
hepatic diverticulum | 3.41e-17 | 22 |
liver primordium | 3.41e-17 | 22 |
vermiform appendix | 3.07e-16 | 1 |
caecum | 3.07e-16 | 1 |
midgut | 3.07e-16 | 1 |
epithelial sac | 3.84e-15 | 25 |
intestine | 6.29e-14 | 17 |
small intestine | 2.52e-13 | 4 |
exocrine gland | 3.19e-12 | 31 |
exocrine system | 3.19e-12 | 31 |
endocrine gland | 7.90e-11 | 35 |
gut epithelium | 6.66e-10 | 54 |
abdomen element | 6.66e-10 | 54 |
abdominal segment element | 6.66e-10 | 54 |
gastrointestinal system | 9.83e-10 | 25 |
subdivision of digestive tract | 1.53e-09 | 118 |
digestive system | 1.69e-09 | 145 |
digestive tract | 1.69e-09 | 145 |
primitive gut | 1.69e-09 | 145 |
abdominal segment of trunk | 6.92e-09 | 60 |
abdomen | 6.92e-09 | 60 |
endoderm-derived structure | 1.62e-08 | 160 |
endoderm | 1.62e-08 | 160 |
presumptive endoderm | 1.62e-08 | 160 |
endocrine system | 2.02e-08 | 45 |
colon | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.70e-09 | 2 |